RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CHAF1AQ13111 956 aaPredicted RBP22.84■■□□□ 1.25
CSPG4P13-201ENST00000565545 TBC1D22AQ8WUA7 517 aa22.84■■□□□ 1.25
CSPG4P13-201ENST00000565545 ABHD8Q96I13 439 aa22.84■■□□□ 1.25
CSPG4P13-201ENST00000565545 FAM205AQ6ZU69 1335 aa22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 M0R2C6 588 aa22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 RIMBP2O15034 1052 aa22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 GMPSP49915 693 aaPredicted RBP22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 RABEP1Q15276 862 aa22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 KIF2CQ99661 725 aa22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 TLL2Q9Y6L7 1015 aa22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 U3KPZ7 1027 aaPredicted RBP22.83■■□□□ 1.25
CSPG4P13-201ENST00000565545 G3V3G9 751 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 NECTIN1Q15223 517 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 SLFNL1Q499Z3 407 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 DCAF8Q5TAQ9 597 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 RNF20Q5VTR2 975 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 CIAPIN1Q6FI81 312 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 CCDC129Q6ZRS4 1044 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 PODNQ7Z5L7 613 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 KCNB2Q92953 911 aa22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 PUS7LQ9H0K6 701 aaKnown RBP22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 RBM8AQ9Y5S9 174 aaKnown RBP22.82■■□□□ 1.24
CSPG4P13-201ENST00000565545 CELF2O95319 508 aaKnown RBP22.81■■□□□ 1.24
CSPG4P13-201ENST00000565545 TNIP1Q15025 636 aa22.81■■□□□ 1.24
CSPG4P13-201ENST00000565545 NAA16Q6N069 864 aaPredicted RBP22.81■■□□□ 1.24
CSPG4P13-201ENST00000565545 IPO9Q96P70 1041 aaKnown RBP22.81■■□□□ 1.24
CSPG4P13-201ENST00000565545 GPAA1O43292 621 aa22.8■■□□□ 1.24
CSPG4P13-201ENST00000565545 RAD17O75943 681 aa22.8■■□□□ 1.24
CSPG4P13-201ENST00000565545 CYP7A1P22680 504 aa22.8■■□□□ 1.24
CSPG4P13-201ENST00000565545 NSUN4Q96CB9 384 aaKnown RBP22.8■■□□□ 1.24
CSPG4P13-201ENST00000565545 SUGT1Q9Y2Z0 365 aa22.8■■□□□ 1.24
CSPG4P13-201ENST00000565545 LDHBP07195 334 aaKnown RBP22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 HSPD1P10809 573 aaKnown RBP22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 ZKSCAN1P17029 563 aaPredicted RBP22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 GNAT2P19087 354 aa22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 MAP2K2P36507 400 aa22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 GSTO1P78417 241 aa22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 KIAA2012Q0VF49 1180 aa22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 BECN1Q14457 450 aa22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 GLIS2Q9BZE0 524 aaPredicted RBP22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 ZNF408Q9H9D4 720 aa22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 CTNNA3Q9UI47 895 aa22.79■■□□□ 1.24
CSPG4P13-201ENST00000565545 AOC2O75106 756 aa22.78■■□□□ 1.24
CSPG4P13-201ENST00000565545 RPAP1Q9BWH6 1393 aaPredicted RBP22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 LDHCP07864 332 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 MECOMQ03112 1051 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 TSGA10IPQ3SY00 556 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 CREB3L3Q68CJ9 461 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 SAPCD2Q86UD0 394 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 DZIP1Q86YF9 867 aaKnown RBP22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 SNX21Q969T3 373 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 STRBPQ96SI9 672 aaKnown RBP22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 TSKSQ9UJT2 592 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 PALD1Q9ULE6 856 aa22.77■■□□□ 1.24
CSPG4P13-201ENST00000565545 CCDC85CA6NKD9 419 aa22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 H7C1D1 291 aa22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 SLC27A2O14975 620 aa22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 PRDX5P30044 214 aa22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 FKBP1AP62942 108 aaKnown RBP22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 DOK7Q18PE1 504 aa22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 SLF2Q8IX21 1173 aa22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 ZC3H15Q8WU90 426 aaKnown RBP22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 SNX14Q9Y5W7 946 aa22.76■■□□□ 1.23
CSPG4P13-201ENST00000565545 MAGEB6P1A0A0J9YX57 407 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 MBD4O95243 580 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 GTF2IP78347 998 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 ALX1Q15699 326 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 MFSD14BQ5SR56 506 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 TTLL5Q6EMB2 1281 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 CDC37L1Q7L3B6 337 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 CERS3Q8IU89 383 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 TM6SF1Q9BZW5 370 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 PGAP2Q9UHJ9 254 aa22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 CNOT7Q9UIV1 285 aaKnown RBP22.75■■□□□ 1.23
CSPG4P13-201ENST00000565545 PATL2C9JE40 543 aaKnown RBP22.74■■□□□ 1.23
CSPG4P13-201ENST00000565545 KRT32Q14532 448 aa22.74■■□□□ 1.23
CSPG4P13-201ENST00000565545 VPS53Q5VIR6 699 aa22.74■■□□□ 1.23
CSPG4P13-201ENST00000565545 JAG2Q9Y219 1238 aa22.74■■□□□ 1.23
CSPG4P13-201ENST00000565545 ZMYM6O95789 1325 aa22.74■■□□□ 1.23
CSPG4P13-201ENST00000565545 ST18O60284 1047 aa22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 ECE2O60344 883 aa22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 PSMA5P28066 241 aa22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 HIRAP54198 1017 aaPredicted RBP22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 STRIP1Q5VSL9 837 aa22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 RASEFQ8IZ41 740 aa22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 ZNF384Q8TF68 577 aa22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 DAXXQ9UER7 740 aaPredicted RBP22.73■■□□□ 1.23
CSPG4P13-201ENST00000565545 CA12O43570 354 aa22.72■■□□□ 1.23
CSPG4P13-201ENST00000565545 ADGRA1Q86SQ6 560 aa22.72■■□□□ 1.23
CSPG4P13-201ENST00000565545 TRPM4Q8TD43 1214 aa22.72■■□□□ 1.23
CSPG4P13-201ENST00000565545 FAM163AQ96GL9 167 aaPredicted RBP22.72■■□□□ 1.23
CSPG4P13-201ENST00000565545 ARMT1Q9H993 441 aa22.72■■□□□ 1.23
CSPG4P13-201ENST00000565545 DBNDD1Q9H9R9 158 aa22.72■■□□□ 1.23
CSPG4P13-201ENST00000565545 MYH2Q9UKX2 1941 aa22.72■■□□□ 1.23
CSPG4P13-201ENST00000565545 PSME4Q14997 1843 aa22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 YDJCA8MPS7 323 aa22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 USP48Q86UV5 1035 aa22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 MICALL2Q8IY33 904 aa22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 LCORLQ8N3X6 602 aa22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 MIGA1Q8NAN2 632 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms