RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FASTKD5Q7L8L6 764 aaKnown RBP11.57□□□□□ -0.56
VPS9D1-205ENST00000565452 MAFAQ8NHW3 353 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-205ENST00000565452 CDX2Q99626 313 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-205ENST00000565452 PLA2G12BQ9BX93 195 aa11.57□□□□□ -0.56
VPS9D1-205ENST00000565452 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-205ENST00000565452 PI4KAP2A4QPH2 592 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 TNFRSF10AO00220 468 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 VCANP13611 3396 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 PLA2G5P39877 138 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 MOGSQ13724 837 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 CCDC30Q5VVM6 783 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 MIGA2Q7L4E1 593 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 UBE3BQ7Z3V4 1068 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 PI4KAP1Q8N8J0 262 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 TDRD7Q8NHU6 1098 aaKnown RBP11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 LBHD1Q9BQE6 289 aaPredicted RBP11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 MRIQ9BWK5 157 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
VPS9D1-205ENST00000565452 NEURL1BA8MQ27 555 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 PLIN1O60240 522 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 INPP5BP32019 993 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 CACNB3P54284 484 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 MDM2Q00987 491 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 IFIT5Q13325 482 aaKnown RBP11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 GPAT2Q6NUI2 795 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 TEKT1Q969V4 418 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 ZNF112Q9UJU3 913 aa11.55□□□□□ -0.56
VPS9D1-205ENST00000565452 CWF19L2Q2TBE0 894 aaKnown RBP11.54□□□□□ -0.56
VPS9D1-205ENST00000565452 MBIPQ9NS73 344 aa11.54□□□□□ -0.56
VPS9D1-205ENST00000565452 OGDHLQ9ULD0 1010 aa11.54□□□□□ -0.56
VPS9D1-205ENST00000565452 SLC45A1Q9Y2W3 748 aa11.54□□□□□ -0.56
VPS9D1-205ENST00000565452 TTC28Q96AY4 2481 aa11.54□□□□□ -0.56
VPS9D1-205ENST00000565452 SPTBN5Q9NRC6 3674 aaKnown RBP11.53□□□□□ -0.56
VPS9D1-205ENST00000565452 HMGCRP04035 888 aa11.53□□□□□ -0.56
VPS9D1-205ENST00000565452 SMCR8Q8TEV9 937 aaPredicted RBP11.53□□□□□ -0.56
VPS9D1-205ENST00000565452 TBC1D22AQ8WUA7 517 aa11.53□□□□□ -0.56
VPS9D1-205ENST00000565452 GCKRQ14397 625 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 TJAP1Q5JTD0 557 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 NOL9Q5SY16 702 aaKnown RBP11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 LDHAL6AQ6ZMR3 332 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 FAM151AQ8WW52 585 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 FAM84BQ96KN1 310 aaPredicted RBP11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 ZDHHC15Q96MV8 337 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 ZHX2Q9Y6X8 837 aa11.52□□□□□ -0.57
VPS9D1-205ENST00000565452 ZSWIM8A7E2V4 1837 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 A0A0G2JLL6 359 aaPredicted RBP11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 UBE4AQ14139 1066 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 TAF7LQ5H9L4 462 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 GADL1Q6ZQY3 521 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 PRRT2Q7Z6L0 340 aaPredicted RBP11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 PICK1Q9NRD5 415 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 RAPGEFL1Q9UHV5 662 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 CHMP3Q9Y3E7 222 aa11.51□□□□□ -0.57
VPS9D1-205ENST00000565452 ZNF853P0CG23 659 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 FOSL2P15408 326 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 GYG1P46976 350 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 GNAI1P63096 354 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 CCDC57Q2TAC2 916 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 APOBEC3HQ6NTF7 200 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 CCDC146Q8IYE0 955 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 ANKRD13CQ8N6S4 541 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 MYLIPQ8WY64 445 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 STK31Q9BXU1 1019 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 PRKAG2Q9UGJ0 569 aa11.5□□□□□ -0.57
VPS9D1-205ENST00000565452 TMEM265A0A087WTH1 108 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 COL6A1P12109 1028 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 CASP7P55210 303 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 LRRC26Q2I0M4 334 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 HHIPL2Q6UWX4 724 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 IFT57Q9NWB7 429 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 GJD2Q9UKL4 321 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 SUGT1Q9Y2Z0 365 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
VPS9D1-205ENST00000565452 ZNF316A6NFI3 1004 aaPredicted RBP11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 MAP3K12Q12852 859 aa11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 GRIK5Q16478 980 aa11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 FAM110CQ1W6H9 321 aa11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 PFASO15067 1338 aa11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 MAST3O60307 1309 aa11.48□□□□□ -0.57
VPS9D1-205ENST00000565452 PTPRAP18433 802 aa11.47□□□□□ -0.57
VPS9D1-205ENST00000565452 GCLCP48506 637 aaPredicted RBP11.47□□□□□ -0.57
VPS9D1-205ENST00000565452 SMAD3P84022 425 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-205ENST00000565452 TCP10Q12799 353 aa11.47□□□□□ -0.57
VPS9D1-205ENST00000565452 TRIM32Q13049 653 aa11.47□□□□□ -0.57
VPS9D1-205ENST00000565452 CAVIN4Q5BKX8 364 aa11.47□□□□□ -0.57
VPS9D1-205ENST00000565452 FBXO33Q7Z6M2 555 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms