RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 SLF2Q8IX21 1173 aa16.96■□□□□ 0.3
RPAP1-208ENST00000565167 KLHL34Q8N239 644 aa16.96■□□□□ 0.3
RPAP1-208ENST00000565167 CERS5Q8N5B7 392 aa16.96■□□□□ 0.3
RPAP1-208ENST00000565167 SDR42E1Q8WUS8 393 aa16.96■□□□□ 0.3
RPAP1-208ENST00000565167 FBXW7Q969H0 707 aa16.96■□□□□ 0.3
RPAP1-208ENST00000565167 CRNKL1Q9BZJ0 848 aaKnown RBP16.96■□□□□ 0.3
RPAP1-208ENST00000565167 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 PPIP5K2O43314 1243 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 BAG3O95817 575 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
RPAP1-208ENST00000565167 TDO2P48775 406 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 GIMAP6Q6P9H5 292 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 DHX32Q7L7V1 743 aaKnown RBP16.95■□□□□ 0.3
RPAP1-208ENST00000565167 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 VPS33BQ9H267 617 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 LIMCH1Q9UPQ0 1083 aa16.95■□□□□ 0.3
RPAP1-208ENST00000565167 FKBP1AP62942 108 aaKnown RBP16.94■□□□□ 0.3
RPAP1-208ENST00000565167 EXOSC10Q01780 885 aaKnown RBP16.94■□□□□ 0.3
RPAP1-208ENST00000565167 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
RPAP1-208ENST00000565167 MXD3Q9BW11 206 aa16.94■□□□□ 0.3
RPAP1-208ENST00000565167 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
RPAP1-208ENST00000565167 SCN9AQ15858 1988 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 GPR75-ASB3A0A0A6YYF3 556 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 NOL10Q9BSC4 688 aaKnown RBP16.93■□□□□ 0.3
RPAP1-208ENST00000565167 ATP8A2Q9NTI2 1148 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 USP17L3A6NCW0 530 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 USP17L4A6NCW7 530 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 CUL4AQ13619 759 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 ANKRD1Q15327 319 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 DACT2Q5SW24 774 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 USP17L1Q7RTZ2 530 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 CERS3Q8IU89 383 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 TBC1D10CQ8IV04 446 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 NCOA7Q8NI08 942 aa16.93■□□□□ 0.3
RPAP1-208ENST00000565167 LARP6Q9BRS8 491 aaKnown RBP16.93■□□□□ 0.3
RPAP1-208ENST00000565167 GAKO14976 1311 aa16.92■□□□□ 0.3
RPAP1-208ENST00000565167 TOB2Q14106 344 aaPredicted RBP16.92■□□□□ 0.3
RPAP1-208ENST00000565167 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
RPAP1-208ENST00000565167 ZSCAN31Q96LW9 406 aaPredicted RBP16.92■□□□□ 0.3
RPAP1-208ENST00000565167 DCP1AQ9NPI6 582 aaPredicted RBP16.92■□□□□ 0.3
RPAP1-208ENST00000565167 ZNF277Q9NRM2 450 aaPredicted RBP16.92■□□□□ 0.3
RPAP1-208ENST00000565167 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
RPAP1-208ENST00000565167 TTF2Q9UNY4 1162 aaKnown RBP16.92■□□□□ 0.3
RPAP1-208ENST00000565167 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
RPAP1-208ENST00000565167 YDJCA8MPS7 323 aa16.91■□□□□ 0.3
RPAP1-208ENST00000565167 BTDP43251 543 aa16.91■□□□□ 0.3
RPAP1-208ENST00000565167 CTDSPL2Q05D32 466 aa16.91■□□□□ 0.3
RPAP1-208ENST00000565167 TRDNQ13061 729 aa16.91■□□□□ 0.3
RPAP1-208ENST00000565167 Q6ZUG5 572 aa16.91■□□□□ 0.3
RPAP1-208ENST00000565167 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
RPAP1-208ENST00000565167 ANAPC4Q9UJX5 808 aa16.91■□□□□ 0.3
RPAP1-208ENST00000565167 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
RPAP1-208ENST00000565167 DDIT3P35638 169 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 PPARAQ07869 468 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 AKNAD1Q5T1N1 836 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 RALYLQ86SE5 291 aaKnown RBP16.9■□□□□ 0.3
RPAP1-208ENST00000565167 MB21D2Q8IYB1 491 aaPredicted RBP16.9■□□□□ 0.3
RPAP1-208ENST00000565167 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 FER1L6Q2WGJ9 1857 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 USP17L12C9JPN9 530 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 USP17L21D6R901 530 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 PLCG2P16885 1265 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 MCM5P33992 734 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 HHIPL2Q6UWX4 724 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 INTS4Q96HW7 963 aaKnown RBP16.9■□□□□ 0.3
RPAP1-208ENST00000565167 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 INCENPQ9NQS7 918 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
RPAP1-208ENST00000565167 TPCN1Q9ULQ1 816 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 DAGLAQ9Y4D2 1042 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
RPAP1-208ENST00000565167 ZNF646O15015 1829 aaPredicted RBP16.9■□□□□ 0.3
RPAP1-208ENST00000565167 USP5P45974 858 aa16.89■□□□□ 0.29
RPAP1-208ENST00000565167 RHBDL3P58872 404 aa16.89■□□□□ 0.29
RPAP1-208ENST00000565167 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
RPAP1-208ENST00000565167 MFSD6Q6ZSS7 791 aa16.89■□□□□ 0.29
RPAP1-208ENST00000565167 CHST3Q7LGC8 479 aa16.89■□□□□ 0.29
RPAP1-208ENST00000565167 FBXL16Q8N461 479 aa16.89■□□□□ 0.29
RPAP1-208ENST00000565167 SH2B1Q9NRF2 756 aaPredicted RBP16.89■□□□□ 0.29
RPAP1-208ENST00000565167 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
RPAP1-208ENST00000565167 SCNN1DP51172 638 aa16.88■□□□□ 0.29
RPAP1-208ENST00000565167 HDLBPQ00341 1268 aaKnown RBP16.88■□□□□ 0.29
RPAP1-208ENST00000565167 ME3Q16798 604 aa16.88■□□□□ 0.29
RPAP1-208ENST00000565167 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
RPAP1-208ENST00000565167 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
RPAP1-208ENST00000565167 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
RPAP1-208ENST00000565167 CNNM2Q9H8M5 875 aa16.88■□□□□ 0.29
RPAP1-208ENST00000565167 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
RPAP1-208ENST00000565167 PRC1O43663 620 aa16.87■□□□□ 0.29
RPAP1-208ENST00000565167 LARGE1O95461 756 aa16.87■□□□□ 0.29
RPAP1-208ENST00000565167 FGD1P98174 961 aa16.87■□□□□ 0.29
RPAP1-208ENST00000565167 KIAA0825Q8IV33 1275 aa16.87■□□□□ 0.29
RPAP1-208ENST00000565167 TGFBRAP1Q8WUH2 860 aa16.87■□□□□ 0.29
RPAP1-208ENST00000565167 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms