RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 DIXDC1Q155Q3 683 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 CD99L2Q8TCZ2 262 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 FAM151AQ8WW52 585 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 ZKSCAN4Q969J2 545 aaPredicted RBP22.97■■□□□ 1.27
CLN6-204ENST00000564752 WRNIP1Q96S55 665 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 DENND2AQ9ULE3 1009 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 HTTP42858 3142 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 SEMA3EO15041 775 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 LDHBP07195 334 aaKnown RBP22.96■■□□□ 1.27
CLN6-204ENST00000564752 TRIM27P14373 513 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 PHKA1P46020 1223 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 DCAF15Q66K64 600 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 CDC42EP5Q6NZY7 148 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 ERO1BQ86YB8 467 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 PCDH10Q9P2E7 1040 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 SALL1Q9NSC2 1324 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 RPAP1Q9BWH6 1393 aaPredicted RBP22.96■■□□□ 1.27
CLN6-204ENST00000564752 OTOFQ9HC10 1997 aa22.96■■□□□ 1.27
CLN6-204ENST00000564752 GNAI3P08754 354 aa22.95■■□□□ 1.26
CLN6-204ENST00000564752 ATF7IPQ6VMQ6 1270 aa22.95■■□□□ 1.26
CLN6-204ENST00000564752 FAM43AQ8N2R8 423 aa22.95■■□□□ 1.26
CLN6-204ENST00000564752 PTPN22Q9Y2R2 807 aa22.95■■□□□ 1.26
CLN6-204ENST00000564752 ADORA1P30542 326 aa22.94■■□□□ 1.26
CLN6-204ENST00000564752 TAF1CQ15572 869 aaPredicted RBP22.94■■□□□ 1.26
CLN6-204ENST00000564752 PRPF38BQ5VTL8 546 aaKnown RBP22.94■■□□□ 1.26
CLN6-204ENST00000564752 CCDC102BQ68D86 513 aa22.94■■□□□ 1.26
CLN6-204ENST00000564752 MIGA2Q7L4E1 593 aa22.94■■□□□ 1.26
CLN6-204ENST00000564752 ZNF341Q9BYN7 854 aa22.94■■□□□ 1.26
CLN6-204ENST00000564752 EFCC1Q9HA90 598 aa22.94■■□□□ 1.26
CLN6-204ENST00000564752 ZFYVE28Q9HCC9 887 aa22.94■■□□□ 1.26
CLN6-204ENST00000564752 IRF6O14896 467 aa22.93■■□□□ 1.26
CLN6-204ENST00000564752 CETPP11597 493 aa22.93■■□□□ 1.26
CLN6-204ENST00000564752 TIMM10P62072 90 aa22.93■■□□□ 1.26
CLN6-204ENST00000564752 CAP1Q01518 475 aa22.93■■□□□ 1.26
CLN6-204ENST00000564752 NFIAQ12857 509 aa22.93■■□□□ 1.26
CLN6-204ENST00000564752 MTX1Q13505 466 aa22.93■■□□□ 1.26
CLN6-204ENST00000564752 USP40Q9NVE5 1235 aa22.93■■□□□ 1.26
CLN6-204ENST00000564752 SRGAP3O43295 1099 aa22.92■■□□□ 1.26
CLN6-204ENST00000564752 TCP10Q12799 353 aa22.92■■□□□ 1.26
CLN6-204ENST00000564752 PPIL2Q13356 520 aa22.92■■□□□ 1.26
CLN6-204ENST00000564752 ZNF112Q9UJU3 913 aa22.92■■□□□ 1.26
CLN6-204ENST00000564752 PPATQ06203 517 aa22.91■■□□□ 1.26
CLN6-204ENST00000564752 SNAPC2Q13487 334 aa22.91■■□□□ 1.26
CLN6-204ENST00000564752 ZKSCAN2Q63HK3 967 aa22.91■■□□□ 1.26
CLN6-204ENST00000564752 ZGPATQ8N5A5 531 aaKnown RBP22.91■■□□□ 1.26
CLN6-204ENST00000564752 CLUAP1Q96AJ1 413 aa22.91■■□□□ 1.26
CLN6-204ENST00000564752 FAM198AQ9UFP1 575 aa22.91■■□□□ 1.26
CLN6-204ENST00000564752 TNNQ9UQP3 1299 aa22.91■■□□□ 1.26
CLN6-204ENST00000564752 MYH13Q9UKX3 1938 aa22.9■■□□□ 1.26
CLN6-204ENST00000564752 BTBD19C9JJ37 291 aa22.9■■□□□ 1.26
CLN6-204ENST00000564752 INPP5BP32019 993 aa22.9■■□□□ 1.26
CLN6-204ENST00000564752 TFCP2Q12800 502 aa22.9■■□□□ 1.26
CLN6-204ENST00000564752 ZCCHC17Q9NP64 241 aaKnown RBP22.9■■□□□ 1.26
CLN6-204ENST00000564752 AKAP2Q9Y2D5 859 aa22.9■■□□□ 1.26
CLN6-204ENST00000564752 CENPFP49454 3210 aa22.89■■□□□ 1.25
CLN6-204ENST00000564752 RASGRF1Q13972 1273 aa22.89■■□□□ 1.25
CLN6-204ENST00000564752 PDS5AQ29RF7 1337 aaKnown RBP22.88■■□□□ 1.25
CLN6-204ENST00000564752 A0A1B0GUL7 405 aa22.88■■□□□ 1.25
CLN6-204ENST00000564752 TLR2O60603 784 aa22.88■■□□□ 1.25
CLN6-204ENST00000564752 WDHD1O75717 1129 aaPredicted RBP22.88■■□□□ 1.25
CLN6-204ENST00000564752 ARHGEF6Q15052 776 aa22.88■■□□□ 1.25
CLN6-204ENST00000564752 ZFPM1Q8IX07 1006 aa22.88■■□□□ 1.25
CLN6-204ENST00000564752 XAGE2Q96GT9 111 aa22.88■■□□□ 1.25
CLN6-204ENST00000564752 IDI2Q9BXS1 227 aa22.88■■□□□ 1.25
CLN6-204ENST00000564752 GAKO14976 1311 aa22.87■■□□□ 1.25
CLN6-204ENST00000564752 ARMC5Q96C12 935 aa22.87■■□□□ 1.25
CLN6-204ENST00000564752 FAM163AQ96GL9 167 aaPredicted RBP22.87■■□□□ 1.25
CLN6-204ENST00000564752 GNAI2P04899 355 aa22.86■■□□□ 1.25
CLN6-204ENST00000564752 MVPQ14764 893 aaKnown RBP22.86■■□□□ 1.25
CLN6-204ENST00000564752 NOL9Q5SY16 702 aaKnown RBP22.86■■□□□ 1.25
CLN6-204ENST00000564752 ABCF2Q9UG63 623 aa22.86■■□□□ 1.25
CLN6-204ENST00000564752 KCNH4Q9UQ05 1017 aa22.86■■□□□ 1.25
CLN6-204ENST00000564752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.86■■□□□ 1.25
CLN6-204ENST00000564752 ENTPD3O75355 529 aa22.85■■□□□ 1.25
CLN6-204ENST00000564752 RGS3P49796 1198 aa22.85■■□□□ 1.25
CLN6-204ENST00000564752 SPTY2D1Q68D10 685 aaPredicted RBP22.85■■□□□ 1.25
CLN6-204ENST00000564752 DZIP1Q86YF9 867 aaKnown RBP22.85■■□□□ 1.25
CLN6-204ENST00000564752 SLF2Q8IX21 1173 aa22.85■■□□□ 1.25
CLN6-204ENST00000564752 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
CLN6-204ENST00000564752 TMEM57Q8N5G2 664 aa22.85■■□□□ 1.25
CLN6-204ENST00000564752 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.85■■□□□ 1.25
CLN6-204ENST00000564752 POTEFA5A3E0 1075 aa22.84■■□□□ 1.25
CLN6-204ENST00000564752 NEUROD6Q96NK8 337 aa22.84■■□□□ 1.25
CLN6-204ENST00000564752 ANKRD23Q86SG2 305 aa22.83■■□□□ 1.25
CLN6-204ENST00000564752 MKI67P46013 3256 aaKnown RBP22.83■■□□□ 1.24
CLN6-204ENST00000564752 ATRNL1Q5VV63 1379 aa22.82■■□□□ 1.24
CLN6-204ENST00000564752 PNMA6EA0A0J9YXQ4 647 aa22.82■■□□□ 1.24
CLN6-204ENST00000564752 PHF20L1A8MW92 1017 aa22.82■■□□□ 1.24
CLN6-204ENST00000564752 LACTBP83111 547 aaPredicted RBP22.82■■□□□ 1.24
CLN6-204ENST00000564752 MAP3K10Q02779 954 aa22.82■■□□□ 1.24
CLN6-204ENST00000564752 MOGSQ13724 837 aa22.82■■□□□ 1.24
CLN6-204ENST00000564752 SH3BP5LQ7L8J4 393 aa22.82■■□□□ 1.24
CLN6-204ENST00000564752 PTCH2Q9Y6C5 1203 aa22.82■■□□□ 1.24
CLN6-204ENST00000564752 RFX7Q2KHR2 1363 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 PDHXO00330 501 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 BTDP43251 543 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 MECOMQ03112 1051 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 G3BP1Q13283 466 aaKnown RBP eCLIP22.81■■□□□ 1.24
CLN6-204ENST00000564752 KIF22Q14807 665 aa22.81■■□□□ 1.24
CLN6-204ENST00000564752 C17orf99Q6UX52 265 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms