RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 SNAP23O00161 211 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 CDC27P30260 824 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 MAP3K12Q12852 859 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 CPLX2Q6PUV4 134 aaKnown RBP23.23■■□□□ 1.31
MSLN-205ENST00000563941 MICU3Q86XE3 530 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 IGDCC4Q8TDY8 1250 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 MPHOSPH8Q99549 860 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 PATL2C9JE40 543 aaKnown RBP23.23■■□□□ 1.31
MSLN-205ENST00000563941 MBD4O95243 580 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 INTS5Q6P9B9 1019 aaKnown RBP23.23■■□□□ 1.31
MSLN-205ENST00000563941 IFNL3Q8IZI9 196 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 NAT10Q9H0A0 1025 aaKnown RBP23.23■■□□□ 1.31
MSLN-205ENST00000563941 LY9Q9HBG7 655 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 SEC31BQ9NQW1 1179 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 ZBTB43O43298 467 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 NFXL1Q6ZNB6 911 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 AOPEPQ8N6M6 819 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 CACTINQ8WUQ7 758 aaKnown RBP23.22■■□□□ 1.31
MSLN-205ENST00000563941 FBXW7Q969H0 707 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 UTP14AQ9BVJ6 771 aaKnown RBP23.22■■□□□ 1.31
MSLN-205ENST00000563941 NAPBQ9H115 298 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 CCDC87Q9NVE4 849 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 KIAA1468Q9P260 1216 aa23.22■■□□□ 1.31
MSLN-205ENST00000563941 CHAF1AQ13111 956 aaPredicted RBP23.21■■□□□ 1.31
MSLN-205ENST00000563941 TMEM67Q5HYA8 995 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 AXDND1Q5T1B0 1012 aaPredicted RBP23.21■■□□□ 1.31
MSLN-205ENST00000563941 PHKBQ93100 1093 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 INCENPQ9NQS7 918 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 KRT40Q6A162 431 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 SGMS1Q86VZ5 419 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 UBE2Q2Q8WVN8 375 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 ARMT1Q9H993 441 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 TIAM2Q8IVF5 1701 aa23.21■■□□□ 1.31
MSLN-205ENST00000563941 COL22A1Q8NFW1 1626 aaPredicted RBP23.2■■□□□ 1.31
MSLN-205ENST00000563941 GOLGA8AA7E2F4 631 aa23.2■■□□□ 1.3
MSLN-205ENST00000563941 CRKLP46109 303 aaKnown RBP23.2■■□□□ 1.3
MSLN-205ENST00000563941 CTDSPL2Q05D32 466 aa23.2■■□□□ 1.3
MSLN-205ENST00000563941 ZNF202O95125 648 aa23.2■■□□□ 1.3
MSLN-205ENST00000563941 CMA1P23946 247 aa23.2■■□□□ 1.3
MSLN-205ENST00000563941 SLC39A14Q15043 492 aa23.2■■□□□ 1.3
MSLN-205ENST00000563941 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
MSLN-205ENST00000563941 A0A0G2JS52 829 aa23.19■■□□□ 1.3
MSLN-205ENST00000563941 PFKFB1P16118 471 aa23.19■■□□□ 1.3
MSLN-205ENST00000563941 ZRSR1Q15695 479 aaKnown RBP23.19■■□□□ 1.3
MSLN-205ENST00000563941 NTRK3Q16288 839 aa23.19■■□□□ 1.3
MSLN-205ENST00000563941 MTERF4Q7Z6M4 381 aaKnown RBP23.19■■□□□ 1.3
MSLN-205ENST00000563941 MYL10Q9BUA6 226 aa23.19■■□□□ 1.3
MSLN-205ENST00000563941 MROH7-TTC4A0A0A0MT08 1334 aa23.19■■□□□ 1.3
MSLN-205ENST00000563941 RANBP6O60518 1105 aaKnown RBP23.18■■□□□ 1.3
MSLN-205ENST00000563941 WDHD1O75717 1129 aaPredicted RBP23.18■■□□□ 1.3
MSLN-205ENST00000563941 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 IARSP41252 1262 aaKnown RBP23.18■■□□□ 1.3
MSLN-205ENST00000563941 FAM217BQ9NTX9 383 aaPredicted RBP23.18■■□□□ 1.3
MSLN-205ENST00000563941 ZSWIM5Q9P217 1185 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 TACC3Q9Y6A5 838 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 GSG1L2A8MUP6 293 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 IFIT3O14879 490 aaKnown RBP23.18■■□□□ 1.3
MSLN-205ENST00000563941 CAMTA2O94983 1202 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 SLC3A2P08195 630 aaKnown RBP23.18■■□□□ 1.3
MSLN-205ENST00000563941 MARCKSP29966 332 aaPredicted RBP23.18■■□□□ 1.3
MSLN-205ENST00000563941 LIFRP42702 1097 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 DPCR1Q3MIW9 517 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 CCDC152Q4G0S7 254 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 PARP10Q53GL7 1025 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 TSC1Q92574 1164 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 CNNM2Q9H8M5 875 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 TAOK2Q9UL54 1235 aa23.18■■□□□ 1.3
MSLN-205ENST00000563941 RREB1Q92766 1687 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 GNL2Q13823 731 aaKnown RBP23.17■■□□□ 1.3
MSLN-205ENST00000563941 GLIPR1L2Q4G1C9 344 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 LRRC8AQ8IWT6 810 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 LAMB2P55268 1798 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 IGHMBP2P38935 993 aaKnown RBP23.17■■□□□ 1.3
MSLN-205ENST00000563941 BCAMP50895 628 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 AKNAD1Q5T1N1 836 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 BPIFA3Q9BQP9 254 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 SLC12A7Q9Y666 1083 aa23.17■■□□□ 1.3
MSLN-205ENST00000563941 BCORQ6W2J9 1755 aa23.16■■□□□ 1.3
MSLN-205ENST00000563941 CCDC69A6NI79 296 aa23.16■■□□□ 1.3
MSLN-205ENST00000563941 PRKAB2O43741 272 aa23.16■■□□□ 1.3
MSLN-205ENST00000563941 TRIM29Q14134 588 aa23.16■■□□□ 1.3
MSLN-205ENST00000563941 LCORLQ8N3X6 602 aa23.16■■□□□ 1.3
MSLN-205ENST00000563941 CDCA7Q9BWT1 371 aaPredicted RBP23.16■■□□□ 1.3
MSLN-205ENST00000563941 KRT23Q9C075 422 aa23.16■■□□□ 1.3
MSLN-205ENST00000563941 RIOK3O14730 519 aaKnown RBP23.15■■□□□ 1.3
MSLN-205ENST00000563941 NEMFO60524 1076 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 ACSBG1Q96GR2 724 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 STK36Q9NRP7 1315 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 RTL9Q8NET4 1388 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 PPP6R2O75170 966 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 NTSR2O95665 410 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 GNAT2P19087 354 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 ARID5BQ14865 1188 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 PTPAQ15257 358 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 DDB1Q16531 1140 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 MFSD6Q6ZSS7 791 aa23.15■■□□□ 1.3
MSLN-205ENST00000563941 C16orf45Q96MC5 204 aaPredicted RBP23.15■■□□□ 1.3
MSLN-205ENST00000563941 NIP7Q9Y221 180 aaKnown RBP eCLIP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms