RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 CCDC146Q8IYE0 955 aa10.67□□□□□ -0.7
SMG1-209ENST00000563836 GTF3C2Q8WUA4 911 aaPredicted RBP10.67□□□□□ -0.7
SMG1-209ENST00000563836 GGA1Q9UJY5 639 aa10.67□□□□□ -0.7
SMG1-209ENST00000563836 SHPRHQ149N8 1683 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 MAP3K19Q56UN5 1328 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 GCP02774 474 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 MAP3K10Q02779 954 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 C1orf229Q6ZS94 237 aaPredicted RBP10.66□□□□□ -0.7
SMG1-209ENST00000563836 LRRC59Q96AG4 307 aaKnown RBP10.66□□□□□ -0.7
SMG1-209ENST00000563836 GSX2Q9BZM3 304 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
SMG1-209ENST00000563836 SPATA31A3Q5VYP0 1347 aa10.65□□□□□ -0.7
SMG1-209ENST00000563836 FAM181BA6NEQ2 426 aa10.65□□□□□ -0.7
SMG1-209ENST00000563836 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
SMG1-209ENST00000563836 SYT9Q86SS6 491 aa10.65□□□□□ -0.7
SMG1-209ENST00000563836 DNMT3AQ9Y6K1 912 aaPredicted RBP10.65□□□□□ -0.7
SMG1-209ENST00000563836 IQSEC2Q5JU85 1478 aa10.65□□□□□ -0.7
SMG1-209ENST00000563836 ALS2Q96Q42 1657 aa10.65□□□□□ -0.7
SMG1-209ENST00000563836 LTBP4Q8N2S1 1624 aa10.65□□□□□ -0.7
SMG1-209ENST00000563836 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
SMG1-209ENST00000563836 APAF1O14727 1248 aa10.64□□□□□ -0.71
SMG1-209ENST00000563836 SIN3BO75182 1162 aa10.64□□□□□ -0.71
SMG1-209ENST00000563836 ARID4AP29374 1257 aaPredicted RBP10.64□□□□□ -0.71
SMG1-209ENST00000563836 HOXC9P31274 260 aa10.64□□□□□ -0.71
SMG1-209ENST00000563836 PCBP4P57723 403 aaKnown RBP10.64□□□□□ -0.71
SMG1-209ENST00000563836 IP6K1Q92551 441 aa10.64□□□□□ -0.71
SMG1-209ENST00000563836 RTCBQ9Y3I0 505 aaKnown RBP10.64□□□□□ -0.71
SMG1-209ENST00000563836 NHSL1Q5SYE7 1610 aa10.64□□□□□ -0.71
SMG1-209ENST00000563836 ROBO1Q9Y6N7 1651 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 PXDNQ92626 1479 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 UBAP1LF5GYI3 381 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 ZBTB39O15060 712 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 FBLN1P23142 703 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 IL13P35225 146 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 CCINQ13939 588 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 GALNT6Q8NCL4 622 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 EDARADDQ8WWZ3 215 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 LTV1Q96GA3 475 aaPredicted RBP10.63□□□□□ -0.71
SMG1-209ENST00000563836 ENAMQ9NRM1 1142 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 SLIT3O75094 1523 aa10.63□□□□□ -0.71
SMG1-209ENST00000563836 COL3A1P02461 1466 aaPredicted RBP10.62□□□□□ -0.71
SMG1-209ENST00000563836 USP19O94966 1318 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 HMOX1P09601 288 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 EPXP11678 715 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 NPR3P17342 541 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 PRKAR2BP31323 418 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 ZAP70P43403 619 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
SMG1-209ENST00000563836 HSP90AB2PQ58FF8 381 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 RAB44Q7Z6P3 723 aaPredicted RBP10.62□□□□□ -0.71
SMG1-209ENST00000563836 RGL4Q8IZJ4 473 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 TCP11L2Q8N4U5 519 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 DDX17Q92841 729 aaKnown RBP10.62□□□□□ -0.71
SMG1-209ENST00000563836 MDFIQ99750 246 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 USP20Q9Y2K6 914 aa10.62□□□□□ -0.71
SMG1-209ENST00000563836 MARF1Q9Y4F3 1742 aaKnown RBP10.61□□□□□ -0.71
SMG1-209ENST00000563836 BRD1O95696 1058 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 EGFRP00533 1210 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 ZC3H6P61129 1189 aaKnown RBP10.61□□□□□ -0.71
SMG1-209ENST00000563836 SULT6B1Q6IMI4 303 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 TNFRSF25Q93038 417 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 BHMTQ93088 406 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 KCNMB2Q9Y691 235 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 PHRF1Q9P1Y6 1649 aaKnown RBP10.61□□□□□ -0.71
SMG1-209ENST00000563836 PHLPP1O60346 1717 aa10.61□□□□□ -0.71
SMG1-209ENST00000563836 SHISA8B8ZZ34 492 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 E9PSI1 815 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 RIPK4P57078 832 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
SMG1-209ENST00000563836 MTMR3Q13615 1198 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 CCDC27Q2M243 656 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 ARHGEF25Q86VW2 580 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 RTF1Q92541 710 aaKnown RBP10.6□□□□□ -0.71
SMG1-209ENST00000563836 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 PRDM11Q9NQV5 511 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 EGFL7Q9UHF1 273 aa10.6□□□□□ -0.71
SMG1-209ENST00000563836 MED1Q15648 1581 aaPredicted RBP10.6□□□□□ -0.71
SMG1-209ENST00000563836 NFAT5O94916 1531 aa10.59□□□□□ -0.71
SMG1-209ENST00000563836 ABCC6O95255 1503 aa10.59□□□□□ -0.71
SMG1-209ENST00000563836 AHDC1Q5TGY3 1603 aaPredicted RBP10.59□□□□□ -0.71
SMG1-209ENST00000563836 ADARB2-AS1A8MUL3 147 aa10.59□□□□□ -0.71
SMG1-209ENST00000563836 MPSTP25325 297 aa10.59□□□□□ -0.71
SMG1-209ENST00000563836 EVA1CP58658 441 aa10.59□□□□□ -0.71
SMG1-209ENST00000563836 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
SMG1-209ENST00000563836 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
SMG1-209ENST00000563836 PIK3R5Q8WYR1 880 aa10.59□□□□□ -0.71
SMG1-209ENST00000563836 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.59□□□□□ -0.71
SMG1-209ENST00000563836 PEAK1Q9H792 1746 aa10.58□□□□□ -0.72
SMG1-209ENST00000563836 FAM208AQ9UK61 1670 aaKnown RBP10.58□□□□□ -0.72
SMG1-209ENST00000563836 ABL1P00519 1130 aa10.58□□□□□ -0.72
SMG1-209ENST00000563836 TMPOP42166 694 aaKnown RBP10.58□□□□□ -0.72
SMG1-209ENST00000563836 SERPINB4P48594 390 aa10.58□□□□□ -0.72
SMG1-209ENST00000563836 FKBP4Q02790 459 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMG1-209ENST00000563836 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
SMG1-209ENST00000563836 NOM1Q5C9Z4 860 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms