RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 CCDC39Q9UFE4 941 aa5.36□□□□□ -1.55
LINC01416-201ENST00000563553 USP11P51784 963 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 CPSF6Q16630 551 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC01416-201ENST00000563553 ABI1Q8IZP0 508 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 CCDC86Q9H6F5 360 aaKnown RBP5.35□□□□□ -1.55
LINC01416-201ENST00000563553 ZNF862O60290 1169 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 WNT11O96014 354 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 RAB6AP20340 208 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 PAOXQ6QHF9 649 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 ZNF765Q7L2R6 523 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 PDZD3Q86UT5 571 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 STK35Q8TDR2 534 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 TBC1D32Q96NH3 1257 aa5.35□□□□□ -1.55
LINC01416-201ENST00000563553 TMPRSS2O15393 492 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 IRAK1P51617 712 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 ZNF157P51786 506 aaPredicted RBP5.34□□□□□ -1.55
LINC01416-201ENST00000563553 DSC3Q14574 896 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 CORO1BQ9BR76 489 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 OSBPL1AQ9BXW6 950 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 GNEQ9Y223 722 aaKnown RBP5.34□□□□□ -1.55
LINC01416-201ENST00000563553 LEMD3Q9Y2U8 911 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 U3KQE9 123 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 SYNGAP1Q96PV0 1343 aa5.34□□□□□ -1.55
LINC01416-201ENST00000563553 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.34□□□□□ -1.56
LINC01416-201ENST00000563553 RPS26P11Q5JNZ5 115 aaPredicted RBP5.34□□□□□ -1.56
LINC01416-201ENST00000563553 DYMQ7RTS9 669 aa5.34□□□□□ -1.56
LINC01416-201ENST00000563553 AP4E1Q9UPM8 1137 aa5.34□□□□□ -1.56
LINC01416-201ENST00000563553 EIF4EBP3O60516 100 aaPredicted RBP5.33□□□□□ -1.56
LINC01416-201ENST00000563553 NEFLP07196 543 aa5.33□□□□□ -1.56
LINC01416-201ENST00000563553 CBLL1Q75N03 491 aa5.33□□□□□ -1.56
LINC01416-201ENST00000563553 DMRTB1Q96MA1 342 aa5.33□□□□□ -1.56
LINC01416-201ENST00000563553 ATG3Q9NT62 314 aa5.33□□□□□ -1.56
LINC01416-201ENST00000563553 CRIM1Q9NZV1 1036 aa5.33□□□□□ -1.56
LINC01416-201ENST00000563553 ZC3H7BQ9UGR2 993 aaKnown RBP5.32□□□□□ -1.56
LINC01416-201ENST00000563553 LIG1P18858 919 aa5.32□□□□□ -1.56
LINC01416-201ENST00000563553 AP3B2Q13367 1082 aa5.32□□□□□ -1.56
LINC01416-201ENST00000563553 C3orf58Q8NDZ4 430 aa5.32□□□□□ -1.56
LINC01416-201ENST00000563553 METTL22Q9BUU2 404 aaPredicted RBP5.32□□□□□ -1.56
LINC01416-201ENST00000563553 ZC3H12CQ9C0D7 883 aaKnown RBP5.32□□□□□ -1.56
LINC01416-201ENST00000563553 GOLGA2P5Q9HBQ8 144 aa5.32□□□□□ -1.56
LINC01416-201ENST00000563553 GADD45BO75293 160 aaPredicted RBP5.31□□□□□ -1.56
LINC01416-201ENST00000563553 ASPAP45381 313 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 KIF4BQ2VIQ3 1234 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 DISC1Q9NRI5 854 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 CYP26A1O43174 497 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 TREHO43280 583 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 CENPBP07199 599 aaPredicted RBP5.31□□□□□ -1.56
LINC01416-201ENST00000563553 FANCD2OSQ96PS1 177 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 SETDB2Q96T68 719 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 CACNA2D2Q9NY47 1150 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 DAGLAQ9Y4D2 1042 aa5.31□□□□□ -1.56
LINC01416-201ENST00000563553 GSTP1P09211 210 aaKnown RBP5.3□□□□□ -1.56
LINC01416-201ENST00000563553 FCGRTP55899 365 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 MAP7Q14244 749 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 PDE3AQ14432 1141 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 CCER1Q8TC90 406 aaPredicted RBP5.3□□□□□ -1.56
LINC01416-201ENST00000563553 TMC1Q8TDI8 760 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 YIPF2Q9BWQ6 316 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 BCO2Q9BYV7 579 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 LGR6Q9HBX8 967 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 PAK6Q9NQU5 681 aaPredicted RBP5.3□□□□□ -1.56
LINC01416-201ENST00000563553 RAD18Q9NS91 495 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 TIMELESSQ9UNS1 1208 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 NEFMP07197 916 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 ENOX2Q16206 610 aaKnown RBP5.3□□□□□ -1.56
LINC01416-201ENST00000563553 HP1BP3Q5SSJ5 553 aaPredicted RBP5.3□□□□□ -1.56
LINC01416-201ENST00000563553 MPRIPQ6WCQ1 1025 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 VSIG10LQ86VR7 867 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 DCTN4Q9UJW0 460 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 TRAK1Q9UPV9 953 aa5.3□□□□□ -1.56
LINC01416-201ENST00000563553 CUX2O14529 1486 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 ZNF252P-AS1Q0IIN9 211 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 CDK5R2Q13319 367 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 NXPE4Q6UWF7 544 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 BSDC1Q9NW68 430 aaPredicted RBP5.29□□□□□ -1.56
LINC01416-201ENST00000563553 NTF4P34130 210 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC01416-201ENST00000563553 OGFOD3Q6PK18 319 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 GIMAP7Q8NHV1 300 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 ZFYVE1Q9HBF4 777 aa5.29□□□□□ -1.56
LINC01416-201ENST00000563553 RASIP1Q5U651 963 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 DDX54Q8TDD1 881 aaKnown RBP5.28□□□□□ -1.56
LINC01416-201ENST00000563553 LRRC4CQ9HCJ2 640 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 KRT82Q9NSB4 513 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 PNMA6FA0A0J9YX94 578 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 PAX4O43316 350 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 ID3Q02535 119 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 TTLL4Q14679 1199 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 DTHD1Q6ZMT9 781 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 ZNF574Q6ZN55 896 aaPredicted RBP5.28□□□□□ -1.56
LINC01416-201ENST00000563553 SPRED2Q7Z698 418 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 TMEM39AQ9NV64 488 aa5.28□□□□□ -1.56
LINC01416-201ENST00000563553 ANGEL1Q9UNK9 670 aaKnown RBP5.28□□□□□ -1.56
LINC01416-201ENST00000563553 BRD1O95696 1058 aa5.27□□□□□ -1.57
LINC01416-201ENST00000563553 FMR1Q06787 632 aaKnown RBP eCLIP5.27□□□□□ -1.57
LINC01416-201ENST00000563553 BCL7CQ8WUZ0 217 aaPredicted RBP5.27□□□□□ -1.57
LINC01416-201ENST00000563553 OSBPL7Q9BZF2 842 aa5.27□□□□□ -1.57
LINC01416-201ENST00000563553 ENC1O14682 589 aa5.26□□□□□ -1.57
LINC01416-201ENST00000563553 PAGE1O75459 146 aa5.26□□□□□ -1.57
LINC01416-201ENST00000563553 LEFTY1O75610 366 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms