RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
SMPD3-205ENST00000563455 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
SMPD3-205ENST00000563455 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
SMPD3-205ENST00000563455 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
SMPD3-205ENST00000563455 GGA1Q9UJY5 639 aa16.44■□□□□ 0.22
SMPD3-205ENST00000563455 SCN4AP35499 1836 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 ZNF213O14771 459 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 CYP21A2P08686 494 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 GSTO1P78417 241 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 TRDNQ13061 729 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 DEFB115Q30KQ5 88 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 CLEC17AQ6ZS10 378 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
SMPD3-205ENST00000563455 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
SMPD3-205ENST00000563455 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
SMPD3-205ENST00000563455 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 M0R2C6 588 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
SMPD3-205ENST00000563455 GYG1P46976 350 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 AK2P54819 239 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 MAP1SQ66K74 1059 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-205ENST00000563455 PI16Q6UXB8 463 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 SLF2Q8IX21 1173 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 ADARB2Q9NS39 739 aaKnown RBP16.42■□□□□ 0.22
SMPD3-205ENST00000563455 AKAP11Q9UKA4 1901 aa16.42■□□□□ 0.22
SMPD3-205ENST00000563455 DDX11L8A8MPP1 907 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 FGAP02671 866 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 LDHCP07864 332 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 PDCP20941 246 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 AOC3Q16853 763 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
SMPD3-205ENST00000563455 CNNM2Q9H8M5 875 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 RAI14Q9P0K7 980 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 DUOX1Q9NRD9 1551 aa16.41■□□□□ 0.22
SMPD3-205ENST00000563455 FGD1P98174 961 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 MAP2K1Q02750 393 aaPredicted RBP16.4■□□□□ 0.22
SMPD3-205ENST00000563455 KIAA2012Q0VF49 1180 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 NFKBIBQ15653 356 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 ADCK5Q3MIX3 580 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 CIAPIN1Q6FI81 312 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
SMPD3-205ENST00000563455 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
SMPD3-205ENST00000563455 GPRC5DQ9NZD1 345 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 ABT1Q9ULW3 272 aaKnown RBP16.4■□□□□ 0.22
SMPD3-205ENST00000563455 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
SMPD3-205ENST00000563455 KIF3AQ9Y496 699 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
SMPD3-205ENST00000563455 RASSF10A6NK89 507 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 E7EWF7 191 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 APPP05067 770 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 IL1R1P14778 569 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 CYP7A1P22680 504 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 MCM5P33992 734 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 EPS15P42566 896 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 ECE1P42892 770 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 SCNN1DP51172 638 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 CXCL9Q07325 125 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 NAA16Q6N069 864 aaPredicted RBP16.39■□□□□ 0.21
SMPD3-205ENST00000563455 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 EYA3Q99504 573 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 AGXT2Q9BYV1 514 aa16.39■□□□□ 0.21
SMPD3-205ENST00000563455 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
SMPD3-205ENST00000563455 H7C1D1 291 aa16.38■□□□□ 0.21
SMPD3-205ENST00000563455 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
SMPD3-205ENST00000563455 VEGFBP49765 207 aa16.38■□□□□ 0.21
SMPD3-205ENST00000563455 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
SMPD3-205ENST00000563455 LLPHQ9BRT6 129 aaKnown RBP16.38■□□□□ 0.21
SMPD3-205ENST00000563455 COA1Q9GZY4 146 aa16.38■□□□□ 0.21
SMPD3-205ENST00000563455 NAPBQ9H115 298 aa16.38■□□□□ 0.21
SMPD3-205ENST00000563455 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
SMPD3-205ENST00000563455 SNAP23O00161 211 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
SMPD3-205ENST00000563455 UFL1O94874 794 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 EVCP57679 992 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
SMPD3-205ENST00000563455 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-205ENST00000563455 IFNL3Q8IZI9 196 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 RGS22Q8NE09 1264 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 ZNF274Q96GC6 653 aaPredicted RBP16.37■□□□□ 0.21
SMPD3-205ENST00000563455 NOL10Q9BSC4 688 aaKnown RBP16.37■□□□□ 0.21
SMPD3-205ENST00000563455 BEGAINQ9BUH8 593 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 KRT23Q9C075 422 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 PRDM10Q9NQV6 1147 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 SMC3Q9UQE7 1217 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
SMPD3-205ENST00000563455 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
SMPD3-205ENST00000563455 MBD4O95243 580 aa16.36■□□□□ 0.21
SMPD3-205ENST00000563455 BAG3O95817 575 aa16.36■□□□□ 0.21
SMPD3-205ENST00000563455 LDHBP07195 334 aaKnown RBP16.36■□□□□ 0.21
SMPD3-205ENST00000563455 PLCG2P16885 1265 aa16.36■□□□□ 0.21
SMPD3-205ENST00000563455 GPSM2P81274 684 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms