RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 MPHOSPH8Q99549 860 aa9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 PAK6Q9NQU5 681 aaPredicted RBP9.95□□□□□ -0.82
HERPUD1-206ENST00000563343 PDHXO00330 501 aa9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 ELL2O00472 640 aaPredicted RBP9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 GRIK5Q16478 980 aa9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 ZNF804AQ7Z570 1209 aa9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 C8orf58Q8NAV2 365 aa9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 TDRD7Q8NHU6 1098 aaKnown RBP9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 CCER1Q8TC90 406 aaPredicted RBP9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 DIS3LQ8TF46 1054 aaKnown RBP9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 PAWRQ96IZ0 340 aaKnown RBP9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 WRNIP1Q96S55 665 aa9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 TTF2Q9UNY4 1162 aaKnown RBP9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 KCNH4Q9UQ05 1017 aa9.94□□□□□ -0.82
HERPUD1-206ENST00000563343 MAST2Q6P0Q8 1798 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 RPAP1Q9BWH6 1393 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 DDX58O95786 925 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 INHAP05111 366 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 ELNP15502 786 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 CRKP46108 304 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 TNNI2P48788 182 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 PPATQ06203 517 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 MFSD14BQ5SR56 506 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 GPAT2Q6NUI2 795 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 TDHQ8IZJ6 230 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 RUNDC1Q96C34 613 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 DEFB118Q96PH6 123 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 BIN2Q9UBW5 565 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 ZMYND8Q9ULU4 1186 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 DOCK1Q14185 1865 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 LTBP2Q14767 1821 aa9.93□□□□□ -0.82
HERPUD1-206ENST00000563343 ADCY3O60266 1144 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 INPP5BP32019 993 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 MAGEA10P43363 369 aaPredicted RBP9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 CACNB3P54284 484 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 FCGRTP55899 365 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 IRF5Q13568 498 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 GCKRQ14397 625 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 C7orf61Q8IZ16 206 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 PRDM6Q9NQX0 595 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 DNAH12Q6ZR08 3092 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 MUC3AQ02505 3323 aa9.92□□□□□ -0.82
HERPUD1-206ENST00000563343 LOC285556D6RIA3 1793 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 RPTORQ8N122 1335 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 ANKRD18BA2A2Z9 1011 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 POTEB2H3BUK9 544 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 TFRCP02786 760 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 FLT3LGP49771 235 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 NEXNQ0ZGT2 675 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 CCDC30Q5VVM6 783 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 G2E3Q7L622 706 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 NECAB2Q7Z6G3 386 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 FAM83AQ86UY5 434 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 TSPYL6Q8N831 410 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 IFT57Q9NWB7 429 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 ZNF112Q9UJU3 913 aa9.91□□□□□ -0.82
HERPUD1-206ENST00000563343 CYP2C8P10632 490 aa9.9□□□□□ -0.82
HERPUD1-206ENST00000563343 SYN1P17600 705 aa9.9□□□□□ -0.82
HERPUD1-206ENST00000563343 FOXO4P98177 505 aa9.9□□□□□ -0.82
HERPUD1-206ENST00000563343 HDLBPQ00341 1268 aaKnown RBP9.9□□□□□ -0.82
HERPUD1-206ENST00000563343 FKBP1CQ5VVH2 108 aa9.9□□□□□ -0.82
HERPUD1-206ENST00000563343 ANKLE1Q8NAG6 615 aa9.9□□□□□ -0.82
HERPUD1-206ENST00000563343 ATAD5Q96QE3 1844 aa9.9□□□□□ -0.82
HERPUD1-206ENST00000563343 GYG1P46976 350 aa9.89□□□□□ -0.83
HERPUD1-206ENST00000563343 FAM109BQ6ICB4 259 aaPredicted RBP9.89□□□□□ -0.83
HERPUD1-206ENST00000563343 FAM84BQ96KN1 310 aaPredicted RBP9.89□□□□□ -0.83
HERPUD1-206ENST00000563343 PARK7Q99497 189 aaKnown RBP9.89□□□□□ -0.83
HERPUD1-206ENST00000563343 ZNF341Q9BYN7 854 aa9.89□□□□□ -0.83
HERPUD1-206ENST00000563343 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.89□□□□□ -0.832e-6■■■■□ 23.5
HERPUD1-206ENST00000563343 CDH23Q9H251 3354 aa9.89□□□□□ -0.83
HERPUD1-206ENST00000563343 TTC28Q96AY4 2481 aa9.89□□□□□ -0.83
HERPUD1-206ENST00000563343 GNAI1P63096 354 aa9.88□□□□□ -0.83
HERPUD1-206ENST00000563343 NOL9Q5SY16 702 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-206ENST00000563343 DCAF15Q66K64 600 aa9.88□□□□□ -0.83
HERPUD1-206ENST00000563343 APOBEC3HQ6NTF7 200 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-206ENST00000563343 MIGA2Q7L4E1 593 aa9.88□□□□□ -0.83
HERPUD1-206ENST00000563343 ZNF594Q96JF6 807 aaPredicted RBP9.88□□□□□ -0.83
HERPUD1-206ENST00000563343 ZDHHC15Q96MV8 337 aa9.88□□□□□ -0.83
HERPUD1-206ENST00000563343 PFASO15067 1338 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 CXCL11O14625 94 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 PLIN1O60240 522 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 HIBADHP31937 336 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 IFIT5Q13325 482 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 UBE4AQ14139 1066 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 EPHA10Q5JZY3 1008 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 HOOK2Q96ED9 719 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 MRIQ9BWK5 157 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 UBE2OQ9C0C9 1292 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 ADAMTS8Q9UP79 889 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 ATRNL1Q5VV63 1379 aa9.87□□□□□ -0.83
HERPUD1-206ENST00000563343 MYH2Q9UKX2 1941 aa9.86□□□□□ -0.83
HERPUD1-206ENST00000563343 A0A0G2JLL6 359 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-206ENST00000563343 PRRT2Q7Z6L0 340 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-206ENST00000563343 FBXO33Q7Z6M2 555 aa9.86□□□□□ -0.83
HERPUD1-206ENST00000563343 TEKT1Q969V4 418 aa9.86□□□□□ -0.83
HERPUD1-206ENST00000563343 NBPF3Q9H094 633 aa9.86□□□□□ -0.83
HERPUD1-206ENST00000563343 OGDHLQ9ULD0 1010 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms