RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 KIF3BO15066 747 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 SGTAO43765 313 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 DESP17661 470 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 USP5P45974 858 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 NEK2P51955 445 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 ARPC4P59998 168 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 SLMAPQ14BN4 828 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
CDH1-205ENST00000562836 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
CDH1-205ENST00000562836 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.65□□□□□ -0.7
CDH1-205ENST00000562836 TBKBP1A7MCY6 615 aa10.65□□□□□ -0.71
CDH1-205ENST00000562836 SART1O43290 800 aaKnown RBP10.65□□□□□ -0.71
CDH1-205ENST00000562836 TLDC1Q6P9B6 456 aa10.65□□□□□ -0.71
CDH1-205ENST00000562836 THEMISQ8N1K5 641 aaPredicted RBP10.65□□□□□ -0.71
CDH1-205ENST00000562836 ATP9BO43861 1147 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 LBRQ14739 615 aaKnown RBP10.64□□□□□ -0.71
CDH1-205ENST00000562836 TOMM20Q15388 145 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 OSBPL9Q96SU4 736 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 DDX20Q9UHI6 824 aaKnown RBP10.64□□□□□ -0.71
CDH1-205ENST00000562836 A0A0B4J203 849 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 PPP1R12BO60237 982 aaPredicted RBP10.64□□□□□ -0.71
CDH1-205ENST00000562836 KCTD2Q14681 263 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 KAZNQ674X7 775 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
CDH1-205ENST00000562836 CCDC121Q6ZUS5 278 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 MAELQ96JY0 434 aaKnown RBP10.64□□□□□ -0.71
CDH1-205ENST00000562836 AS3MTQ9HBK9 375 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 MYOM3Q5VTT5 1437 aa10.64□□□□□ -0.71
CDH1-205ENST00000562836 AKR1B10O60218 316 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 TBCAO75347 108 aaKnown RBP10.63□□□□□ -0.71
CDH1-205ENST00000562836 GNAT1P11488 350 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 CBX3Q13185 183 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 CUL3Q13618 768 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 RASA2Q15283 850 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 ISM2Q6H9L7 571 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 TRIM50Q86XT4 487 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 ZFPM2Q8WW38 1151 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 OXCT2Q9BYC2 517 aaPredicted RBP10.63□□□□□ -0.71
CDH1-205ENST00000562836 SLC39A2Q9NP94 309 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 DCAF16Q9NXF7 216 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH1-205ENST00000562836 SFMBT1Q9UHJ3 866 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 DHX29Q7Z478 1369 aaKnown RBP10.63□□□□□ -0.71
CDH1-205ENST00000562836 SEC31AO94979 1220 aaKnown RBP10.63□□□□□ -0.71
CDH1-205ENST00000562836 G3BP1Q13283 466 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH1-205ENST00000562836 BIRC3Q13489 604 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 MIS18BP1Q6P0N0 1132 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 TTLL7Q6ZT98 887 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 OSTM1Q86WC4 334 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 DRC7Q8IY82 874 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 MAB21L3Q8N8X9 362 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 C7orf57Q8NEG2 295 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 DHTKD1Q96HY7 919 aaPredicted RBP10.63□□□□□ -0.71
CDH1-205ENST00000562836 NACAP1Q9BZK3 213 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 QPCTLQ9NXS2 382 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 NAIPQ13075 1403 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 CNTLNQ9NXG0 1405 aa10.63□□□□□ -0.71
CDH1-205ENST00000562836 MYO1FO00160 1098 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 KIAA0754O94854 1291 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 HSPA8P11142 646 aaKnown RBP10.62□□□□□ -0.71
CDH1-205ENST00000562836 CDC25CP30307 473 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 BPHLQ86WA6 291 aaPredicted RBP10.62□□□□□ -0.71
CDH1-205ENST00000562836 PPP1R14BQ96C90 147 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 ASIC4Q96FT7 647 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 IFT57Q9NWB7 429 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 PAIP2BQ9ULR5 123 aaKnown RBP10.62□□□□□ -0.71
CDH1-205ENST00000562836 FHOD3Q2V2M9 1422 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 C10orf76Q5T2E6 689 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 BICDL1Q6ZP65 573 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 NCCRP1Q6ZVX7 275 aaPredicted RBP10.62□□□□□ -0.71
CDH1-205ENST00000562836 SPATS2Q86XZ4 545 aaKnown RBP10.62□□□□□ -0.71
CDH1-205ENST00000562836 SUN5Q8TC36 379 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 SRPK1Q96SB4 655 aaKnown RBP10.62□□□□□ -0.71
CDH1-205ENST00000562836 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
CDH1-205ENST00000562836 TSPY26PQ9H489 355 aa10.62□□□□□ -0.71
CDH1-205ENST00000562836 H0Y3Z8 333 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 CCDC159P0C7I6 412 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 TCF7P36402 384 aaPredicted RBP10.61□□□□□ -0.71
CDH1-205ENST00000562836 WTAPQ15007 396 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 CCDC152Q4G0S7 254 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 FLCNQ8NFG4 579 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 SH3TC2Q8TF17 1288 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 APPBP2Q92624 585 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
CDH1-205ENST00000562836 LMBRD1Q9NUN5 540 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 GALNT8Q9NY28 637 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.61□□□□□ -0.71
CDH1-205ENST00000562836 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 CAPN7Q9Y6W3 813 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 MTUS2Q5JR59 1369 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 PTPRKQ15262 1439 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 BIN1O00499 593 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 SASH3O75995 380 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 EZRP15311 586 aaKnown RBP10.61□□□□□ -0.71
CDH1-205ENST00000562836 ZFXP17010 805 aaPredicted RBP10.61□□□□□ -0.71
CDH1-205ENST00000562836 PIK3CAP42336 1068 aa10.61□□□□□ -0.71
CDH1-205ENST00000562836 GBP7Q8N8V2 638 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms