RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
NIP7-204ENST00000562523 SLC7A3Q8WY07 619 aa6.87□□□□□ -1.31
NIP7-204ENST00000562523 FMNL2Q96PY5 1086 aa6.87□□□□□ -1.31
NIP7-204ENST00000562523 FAM83CQ9BQN1 747 aa6.87□□□□□ -1.31
NIP7-204ENST00000562523 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
NIP7-204ENST00000562523 ELP3Q9H9T3 547 aa6.87□□□□□ -1.31
NIP7-204ENST00000562523 RGS17Q9UGC6 210 aaPredicted RBP6.87□□□□□ -1.31
NIP7-204ENST00000562523 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
NIP7-204ENST00000562523 PRR19A6NJB7 356 aa6.86□□□□□ -1.31
NIP7-204ENST00000562523 TM4SF5O14894 197 aa6.86□□□□□ -1.31
NIP7-204ENST00000562523 YBX3P16989 372 aaKnown RBP eCLIP6.86□□□□□ -1.31
NIP7-204ENST00000562523 NLRP12P59046 1061 aa6.86□□□□□ -1.31
NIP7-204ENST00000562523 ZNF438Q7Z4V0 828 aa6.86□□□□□ -1.31
NIP7-204ENST00000562523 SHKBP1Q8TBC3 707 aa6.86□□□□□ -1.31
NIP7-204ENST00000562523 KANSL3Q9P2N6 904 aa6.86□□□□□ -1.31
NIP7-204ENST00000562523 SYNMO15061 1565 aa6.86□□□□□ -1.31
NIP7-204ENST00000562523 PLEKHH2Q8IVE3 1493 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 CASKIN1Q8WXD9 1431 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 XIRP1Q702N8 1843 aaKnown RBP6.85□□□□□ -1.31
NIP7-204ENST00000562523 H3BRJ5 948 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 SPINK2P20155 84 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 HNRNPMP52272 730 aaKnown RBP eCLIP6.85□□□□□ -1.31
NIP7-204ENST00000562523 ANKRD34AQ69YU3 496 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 PDE12Q6L8Q7 609 aaKnown RBP6.85□□□□□ -1.31
NIP7-204ENST00000562523 FDX2Q6P4F2 183 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 NUDT16Q96DE0 195 aaKnown RBP6.85□□□□□ -1.31
NIP7-204ENST00000562523 RNF208Q9H0X6 261 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 TMEM63CQ9P1W3 806 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 VWDEQ8N2E2 1590 aa6.85□□□□□ -1.31
NIP7-204ENST00000562523 SETD1AO15047 1707 aaKnown RBP6.84□□□□□ -1.31
NIP7-204ENST00000562523 UGGT1Q9NYU2 1555 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 WDR64B1ANS9 1081 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
NIP7-204ENST00000562523 PREPP48147 710 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 ARL4DP49703 201 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 MEX3CQ5U5Q3 659 aaKnown RBP6.84□□□□□ -1.31
NIP7-204ENST00000562523 DTX1Q86Y01 620 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 TTC16Q8NEE8 873 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 WNT8BQ93098 351 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 RUSC1Q9BVN2 902 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 OSGEPQ9NPF4 335 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 CNTN3Q9P232 1028 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 FYCO1Q9BQS8 1478 aa6.84□□□□□ -1.31
NIP7-204ENST00000562523 DEPDC5O75140 1603 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 ALKQ9UM73 1620 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 WASHC2CQ9Y4E1 1318 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 LRRC7Q96NW7 1537 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 GPATCH8Q9UKJ3 1502 aaKnown RBP6.83□□□□□ -1.32
NIP7-204ENST00000562523 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.83□□□□□ -1.32
NIP7-204ENST00000562523 CES1P23141 567 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 RXRBP28702 533 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.83□□□□□ -1.32
NIP7-204ENST00000562523 ATCAYQ86WG3 371 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 ZMYND15Q9H091 742 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 CFDP1Q9UEE9 299 aaPredicted RBP6.83□□□□□ -1.32
NIP7-204ENST00000562523 NLRP1Q9C000 1473 aa6.83□□□□□ -1.32
NIP7-204ENST00000562523 KDM5DQ9BY66 1539 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 CEP152O94986 1710 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 ZC3H13Q5T200 1668 aaKnown RBP6.82□□□□□ -1.32
NIP7-204ENST00000562523 PDE2AO00408 941 aaPredicted RBP6.82□□□□□ -1.32
NIP7-204ENST00000562523 TRPA1O75762 1119 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 PCSK2P16519 638 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 FBXL6Q8N531 539 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 GIMAP7Q8NHV1 300 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 MFSD14AQ96MC6 490 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 ATG3Q9NT62 314 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 SALL4Q9UJQ4 1053 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.82□□□□□ -1.32
NIP7-204ENST00000562523 KIAA1107Q9UPP5 1409 aa6.82□□□□□ -1.32
NIP7-204ENST00000562523 MED14O60244 1454 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 PZPP20742 1482 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 KIF3BO15066 747 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 RPLP1P05386 114 aaKnown RBP6.81□□□□□ -1.32
NIP7-204ENST00000562523 ACPPP15309 386 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 MAP4P27816 1152 aaKnown RBP6.81□□□□□ -1.32
NIP7-204ENST00000562523 C8orf34Q49A92 452 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 TMEM164Q5U3C3 297 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 C1orf127Q8N9H9 656 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 C12orf50Q8NA57 414 aaPredicted RBP6.81□□□□□ -1.32
NIP7-204ENST00000562523 SEPT3Q9UH03 358 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 HIF3AQ9Y2N7 669 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 TIAM1Q13009 1591 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 CCNB3Q8WWL7 1395 aa6.81□□□□□ -1.32
NIP7-204ENST00000562523 ATG7O95352 703 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 DNM1Q05193 864 aaKnown RBP6.8□□□□□ -1.32
NIP7-204ENST00000562523 C19orf57Q0VDD7 668 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 NUTM2GQ5VZR2 741 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 ZNF772Q68DY9 489 aaPredicted RBP6.8□□□□□ -1.32
NIP7-204ENST00000562523 UBR1Q8IWV7 1749 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 EDEM1Q92611 657 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 MIA2Q96PC5 1412 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 DZANK1Q9NVP4 752 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 PIM2Q9P1W9 311 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 LEMD3Q9Y2U8 911 aa6.8□□□□□ -1.32
NIP7-204ENST00000562523 FAM135BQ49AJ0 1406 aa6.79□□□□□ -1.32
NIP7-204ENST00000562523 NFKBIEO00221 500 aa6.79□□□□□ -1.32
NIP7-204ENST00000562523 HOXA10P31260 410 aaPredicted RBP6.79□□□□□ -1.32
NIP7-204ENST00000562523 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
NIP7-204ENST00000562523 HGSNATQ68CP4 663 aa6.79□□□□□ -1.32
NIP7-204ENST00000562523 CLP1Q92989 425 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms