RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 LPIN2Q92539 896 aa24.27■■□□□ 1.48
CDH11-203ENST00000562325 USP44Q9H0E7 712 aa24.27■■□□□ 1.48
CDH11-203ENST00000562325 CACNB3P54284 484 aa24.26■■□□□ 1.47
CDH11-203ENST00000562325 FAM151AQ8WW52 585 aa24.26■■□□□ 1.47
CDH11-203ENST00000562325 EYA2O00167 538 aa24.25■■□□□ 1.47
CDH11-203ENST00000562325 SLC5A1P13866 664 aa24.25■■□□□ 1.47
CDH11-203ENST00000562325 SLC4A8Q2Y0W8 1093 aa24.25■■□□□ 1.47
CDH11-203ENST00000562325 ZKSCAN4Q969J2 545 aaPredicted RBP24.25■■□□□ 1.47
CDH11-203ENST00000562325 ZNF112Q9UJU3 913 aa24.25■■□□□ 1.47
CDH11-203ENST00000562325 ANKRD23Q86SG2 305 aa24.24■■□□□ 1.47
CDH11-203ENST00000562325 KCNH4Q9UQ05 1017 aa24.24■■□□□ 1.47
CDH11-203ENST00000562325 E9PSI1 815 aa24.23■■□□□ 1.47
CDH11-203ENST00000562325 C17orf99Q6UX52 265 aa24.23■■□□□ 1.47
CDH11-203ENST00000562325 HOXD10P28358 340 aa24.22■■□□□ 1.47
CDH11-203ENST00000562325 RFX5P48382 616 aaPredicted RBP24.22■■□□□ 1.47
CDH11-203ENST00000562325 NOL9Q5SY16 702 aaKnown RBP24.22■■□□□ 1.47
CDH11-203ENST00000562325 FAM9BQ8IZU0 186 aa24.22■■□□□ 1.47
CDH11-203ENST00000562325 SALL1Q9NSC2 1324 aa24.21■■□□□ 1.47
CDH11-203ENST00000562325 KLHDC4Q8TBB5 520 aa24.21■■□□□ 1.47
CDH11-203ENST00000562325 SEMA3EO15041 775 aa24.2■■□□□ 1.46
CDH11-203ENST00000562325 CIAO1O76071 339 aa24.2■■□□□ 1.46
CDH11-203ENST00000562325 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
CDH11-203ENST00000562325 ALDH1L2Q3SY69 923 aa24.2■■□□□ 1.46
CDH11-203ENST00000562325 GNL3LQ9NVN8 582 aaKnown RBP24.2■■□□□ 1.46
CDH11-203ENST00000562325 HDAC5Q9UQL6 1122 aa24.2■■□□□ 1.46
CDH11-203ENST00000562325 DAGLAQ9Y4D2 1042 aa24.2■■□□□ 1.46
CDH11-203ENST00000562325 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.19■■□□□ 1.46
CDH11-203ENST00000562325 NKX2-3Q8TAU0 364 aa24.19■■□□□ 1.46
CDH11-203ENST00000562325 SSH1Q8WYL5 1049 aa24.19■■□□□ 1.46
CDH11-203ENST00000562325 ARHGAP39Q9C0H5 1083 aa24.19■■□□□ 1.46
CDH11-203ENST00000562325 SRRDQ9UH36 339 aa24.19■■□□□ 1.46
CDH11-203ENST00000562325 ADGRA2Q96PE1 1338 aa24.18■■□□□ 1.46
CDH11-203ENST00000562325 INPP5BP32019 993 aa24.18■■□□□ 1.46
CDH11-203ENST00000562325 CDC42EP5Q6NZY7 148 aa24.18■■□□□ 1.46
CDH11-203ENST00000562325 MIGA2Q7L4E1 593 aa24.18■■□□□ 1.46
CDH11-203ENST00000562325 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
CDH11-203ENST00000562325 PDHXO00330 501 aa24.17■■□□□ 1.46
CDH11-203ENST00000562325 CXCL11O14625 94 aa24.17■■□□□ 1.46
CDH11-203ENST00000562325 ATG9AQ7Z3C6 839 aa24.17■■□□□ 1.46
CDH11-203ENST00000562325 SH3TC2Q8TF17 1288 aa24.17■■□□□ 1.46
CDH11-203ENST00000562325 CEP290O15078 2479 aa24.16■■□□□ 1.46
CDH11-203ENST00000562325 LDHBP07195 334 aaKnown RBP24.16■■□□□ 1.46
CDH11-203ENST00000562325 FXR1P51114 621 aaKnown RBP eCLIP24.16■■□□□ 1.46
CDH11-203ENST00000562325 ZGPATQ8N5A5 531 aaKnown RBP24.16■■□□□ 1.46
CDH11-203ENST00000562325 PARK7Q99497 189 aaKnown RBP24.16■■□□□ 1.46
CDH11-203ENST00000562325 CEP126Q9P2H0 1117 aa24.16■■□□□ 1.46
CDH11-203ENST00000562325 DENND2AQ9ULE3 1009 aa24.16■■□□□ 1.46
CDH11-203ENST00000562325 CAPN2P17655 700 aa24.15■■□□□ 1.46
CDH11-203ENST00000562325 PRDX5P30044 214 aa24.15■■□□□ 1.46
CDH11-203ENST00000562325 PSMC4P43686 418 aa24.15■■□□□ 1.46
CDH11-203ENST00000562325 ATP2B3Q16720 1220 aa24.15■■□□□ 1.46
CDH11-203ENST00000562325 TRIM47Q96LD4 638 aa24.15■■□□□ 1.46
CDH11-203ENST00000562325 IDI2Q9BXS1 227 aa24.15■■□□□ 1.46
CDH11-203ENST00000562325 MYH13Q9UKX3 1938 aa24.14■■□□□ 1.46
CDH11-203ENST00000562325 TCP10Q12799 353 aa24.14■■□□□ 1.45
CDH11-203ENST00000562325 NFIAQ12857 509 aa24.14■■□□□ 1.45
CDH11-203ENST00000562325 MOGSQ13724 837 aa24.14■■□□□ 1.45
CDH11-203ENST00000562325 DIXDC1Q155Q3 683 aa24.14■■□□□ 1.45
CDH11-203ENST00000562325 FAM198AQ9UFP1 575 aa24.14■■□□□ 1.45
CDH11-203ENST00000562325 CPA4Q9UI42 421 aa24.14■■□□□ 1.45
CDH11-203ENST00000562325 PDS5AQ29RF7 1337 aaKnown RBP24.13■■□□□ 1.45
CDH11-203ENST00000562325 ENTPD3O75355 529 aa24.13■■□□□ 1.45
CDH11-203ENST00000562325 CT47B1P0C2W7 299 aaPredicted RBP24.13■■□□□ 1.45
CDH11-203ENST00000562325 UBTFL1P0CB47 393 aaPredicted RBP24.13■■□□□ 1.45
CDH11-203ENST00000562325 GRK4P32298 578 aa24.13■■□□□ 1.45
CDH11-203ENST00000562325 IL15P40933 162 aaPredicted RBP24.13■■□□□ 1.45
CDH11-203ENST00000562325 FASTKD5Q7L8L6 764 aaKnown RBP24.13■■□□□ 1.45
CDH11-203ENST00000562325 RAET1EQ8TD07 263 aa24.13■■□□□ 1.45
CDH11-203ENST00000562325 SLC45A1Q9Y2W3 748 aa24.13■■□□□ 1.45
CDH11-203ENST00000562325 ATRNL1Q5VV63 1379 aa24.13■■□□□ 1.45
CDH11-203ENST00000562325 OSBPP22059 807 aa24.12■■□□□ 1.45
CDH11-203ENST00000562325 MAP3K10Q02779 954 aa24.12■■□□□ 1.45
CDH11-203ENST00000562325 SLFN5Q08AF3 891 aa24.12■■□□□ 1.45
CDH11-203ENST00000562325 SLF2Q8IX21 1173 aa24.12■■□□□ 1.45
CDH11-203ENST00000562325 USP40Q9NVE5 1235 aa24.12■■□□□ 1.45
CDH11-203ENST00000562325 GAKO14976 1311 aa24.11■■□□□ 1.45
CDH11-203ENST00000562325 FMNL1O95466 1100 aaPredicted RBP24.11■■□□□ 1.45
CDH11-203ENST00000562325 GJB1P08034 283 aa24.11■■□□□ 1.45
CDH11-203ENST00000562325 BCRP11274 1271 aa24.11■■□□□ 1.45
CDH11-203ENST00000562325 CTGFP29279 349 aa24.11■■□□□ 1.45
CDH11-203ENST00000562325 FCGRTP55899 365 aa24.11■■□□□ 1.45
CDH11-203ENST00000562325 FAM163AQ96GL9 167 aaPredicted RBP24.11■■□□□ 1.45
CDH11-203ENST00000562325 COLQQ9Y215 455 aaPredicted RBP24.11■■□□□ 1.45
CDH11-203ENST00000562325 MYPNQ86TC9 1320 aa24.1■■□□□ 1.45
CDH11-203ENST00000562325 PHF20L1A8MW92 1017 aa24.1■■□□□ 1.45
CDH11-203ENST00000562325 GJA8P48165 433 aa24.1■■□□□ 1.45
CDH11-203ENST00000562325 SCYL3Q8IZE3 742 aa24.1■■□□□ 1.45
CDH11-203ENST00000562325 PICK1Q9NRD5 415 aa24.1■■□□□ 1.45
CDH11-203ENST00000562325 RFX7Q2KHR2 1363 aa24.09■■□□□ 1.45
CDH11-203ENST00000562325 A0A0G2JLL6 359 aaPredicted RBP24.09■■□□□ 1.45
CDH11-203ENST00000562325 UBXN2AP68543 259 aa24.09■■□□□ 1.45
CDH11-203ENST00000562325 GPAT2Q6NUI2 795 aa24.09■■□□□ 1.45
CDH11-203ENST00000562325 PRRT2Q7Z6L0 340 aaPredicted RBP24.09■■□□□ 1.45
CDH11-203ENST00000562325 SLAIN1Q8ND83 568 aa24.09■■□□□ 1.45
CDH11-203ENST00000562325 SHISA4Q96DD7 197 aa24.09■■□□□ 1.45
CDH11-203ENST00000562325 SMC4Q9NTJ3 1288 aa24.09■■□□□ 1.45
CDH11-203ENST00000562325 ZSWIM8A7E2V4 1837 aa24.09■■□□□ 1.45
CDH11-203ENST00000562325 H0YGN5 161 aa24.08■■□□□ 1.45
CDH11-203ENST00000562325 MTFR1Q15390 333 aa24.08■■□□□ 1.45
CDH11-203ENST00000562325 UBE2Q1Q7Z7E8 422 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms