RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	AK9	Q5TCS8	1911 aa		33.62	■■■□□ 2.97
SNRPA1-215	ENST00000561187	SPDYE5	A6NIY4	337 aa		33.62	■■■□□ 2.97
SNRPA1-215	ENST00000561187	NFIA	Q12857	509 aa		33.62	■■■□□ 2.97
SNRPA1-215	ENST00000561187	CDC42EP5	Q6NZY7	148 aa		33.62	■■■□□ 2.97
SNRPA1-215	ENST00000561187	RPAP1	Q9BWH6	1393 aa	Predicted RBP	33.61	■■■□□ 2.97
SNRPA1-215	ENST00000561187	FKBP1C	Q5VVH2	108 aa		33.61	■■■□□ 2.97
SNRPA1-215	ENST00000561187	FRAT1	Q92837	279 aa	Predicted RBP	33.61	■■■□□ 2.97
SNRPA1-215	ENST00000561187	COPRS	Q9NQ92	184 aa		33.61	■■■□□ 2.97
SNRPA1-215	ENST00000561187	SRGAP3	O43295	1099 aa		33.6	■■■□□ 2.97
SNRPA1-215	ENST00000561187	SP3	Q02447	781 aa		33.6	■■■□□ 2.97
SNRPA1-215	ENST00000561187	DCAF15	Q66K64	600 aa		33.6	■■■□□ 2.97
SNRPA1-215	ENST00000561187	DENND2A	Q9ULE3	1009 aa		33.6	■■■□□ 2.97
SNRPA1-215	ENST00000561187	HDAC5	Q9UQL6	1122 aa		33.6	■■■□□ 2.97
SNRPA1-215	ENST00000561187	INPP5B	P32019	993 aa		33.59	■■■□□ 2.97
SNRPA1-215	ENST00000561187	CCDC102B	Q68D86	513 aa		33.59	■■■□□ 2.97
SNRPA1-215	ENST00000561187	TIMM10	P62072	90 aa		33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	INTS3	Q68E01	1043 aa	Known RBP	33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	ERO1B	Q86YB8	467 aa		33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	CLUAP1	Q96AJ1	413 aa		33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	HOOK2	Q96ED9	719 aa		33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	ZNF341	Q9BYN7	854 aa		33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	EFCC1	Q9HA90	598 aa		33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	USP40	Q9NVE5	1235 aa		33.58	■■■□□ 2.97
SNRPA1-215	ENST00000561187	IRF6	O14896	467 aa		33.57	■■■□□ 2.96
SNRPA1-215	ENST00000561187	BCAR3	O75815	825 aa		33.57	■■■□□ 2.96
SNRPA1-215	ENST00000561187	TFCP2	Q12800	502 aa		33.57	■■■□□ 2.96
SNRPA1-215	ENST00000561187	FAM151A	Q8WW52	585 aa		33.57	■■■□□ 2.96
SNRPA1-215	ENST00000561187	ZFYVE28	Q9HCC9	887 aa		33.57	■■■□□ 2.96
SNRPA1-215	ENST00000561187	GNAI3	P08754	354 aa		33.56	■■■□□ 2.96
SNRPA1-215	ENST00000561187	TRIM27	P14373	513 aa		33.56	■■■□□ 2.96
SNRPA1-215	ENST00000561187	RASGRF1	Q13972	1273 aa		33.56	■■■□□ 2.96
SNRPA1-215	ENST00000561187	PTPN22	Q9Y2R2	807 aa		33.56	■■■□□ 2.96
SNRPA1-215	ENST00000561187	ECM2	O94769	699 aa	Predicted RBP	33.55	■■■□□ 2.96
SNRPA1-215	ENST00000561187	ARHGAP45	Q92619	1136 aa		33.55	■■■□□ 2.96
SNRPA1-215	ENST00000561187	FAM198A	Q9UFP1	575 aa		33.55	■■■□□ 2.96
SNRPA1-215	ENST00000561187	ABCF2	Q9UG63	623 aa		33.55	■■■□□ 2.96
SNRPA1-215	ENST00000561187	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	33.55	■■■□□ 2.96
SNRPA1-215	ENST00000561187	MYH2	Q9UKX2	1941 aa		33.55	■■■□□ 2.96
SNRPA1-215	ENST00000561187	SALL1	Q9NSC2	1324 aa		33.54	■■■□□ 2.96
SNRPA1-215	ENST00000561187		A0A1B0GUL7	405 aa		33.54	■■■□□ 2.96
SNRPA1-215	ENST00000561187	SEMA3E	O15041	775 aa		33.54	■■■□□ 2.96
SNRPA1-215	ENST00000561187	ZFPM1	Q8IX07	1006 aa		33.54	■■■□□ 2.96
SNRPA1-215	ENST00000561187	ZSWIM8	A7E2V4	1837 aa		33.53	■■■□□ 2.96
SNRPA1-215	ENST00000561187	BTBD19	C9JJ37	291 aa		33.53	■■■□□ 2.96
SNRPA1-215	ENST00000561187	CETP	P11597	493 aa		33.53	■■■□□ 2.96
SNRPA1-215	ENST00000561187	PPIL2	Q13356	520 aa		33.53	■■■□□ 2.96
SNRPA1-215	ENST00000561187	SNAPC2	Q13487	334 aa		33.53	■■■□□ 2.96
SNRPA1-215	ENST00000561187	DZIP1	Q86YF9	867 aa	Known RBP	33.53	■■■□□ 2.96
SNRPA1-215	ENST00000561187	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	33.53	■■■□□ 2.96
SNRPA1-215	ENST00000561187	XAGE2	Q96GT9	111 aa		33.52	■■■□□ 2.96
SNRPA1-215	ENST00000561187	BRCA2	P51587	3418 aa		33.51	■■■□□ 2.96
SNRPA1-215	ENST00000561187	POTEF	A5A3E0	1075 aa		33.51	■■■□□ 2.95
SNRPA1-215	ENST00000561187	NEUROD6	Q96NK8	337 aa		33.51	■■■□□ 2.95
SNRPA1-215	ENST00000561187	ATF7IP	Q6VMQ6	1270 aa		33.5	■■■□□ 2.95
SNRPA1-215	ENST00000561187	DOCK2	Q92608	1830 aa		33.49	■■■□□ 2.95
SNRPA1-215	ENST00000561187	IPO8	O15397	1037 aa	Known RBP	33.49	■■■□□ 2.95
SNRPA1-215	ENST00000561187	RGS3	P49796	1198 aa		33.49	■■■□□ 2.95
SNRPA1-215	ENST00000561187	ZGPAT	Q8N5A5	531 aa	Known RBP	33.49	■■■□□ 2.95
SNRPA1-215	ENST00000561187	MKI67	P46013	3256 aa	Known RBP	33.49	■■■□□ 2.95
SNRPA1-215	ENST00000561187	MTX1	Q13505	466 aa		33.48	■■■□□ 2.95
SNRPA1-215	ENST00000561187	ARHGAP39	Q9C0H5	1083 aa		33.48	■■■□□ 2.95
SNRPA1-215	ENST00000561187	KIAA0100	Q14667	2235 aa	Known RBP	33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	PNMA6E	A0A0J9YXQ4	647 aa		33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	GNAI2	P04899	355 aa		33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	SLURP2	P0DP57	97 aa		33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	PPAT	Q06203	517 aa		33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	PI16	Q6UXB8	463 aa		33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	AKAP2	Q9Y2D5	859 aa		33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	PTCH2	Q9Y6C5	1203 aa		33.47	■■■□□ 2.95
SNRPA1-215	ENST00000561187	WDHD1	O75717	1129 aa	Predicted RBP	33.46	■■■□□ 2.95
SNRPA1-215	ENST00000561187	PICALM	Q13492	652 aa		33.46	■■■□□ 2.95
SNRPA1-215	ENST00000561187	MVP	Q14764	893 aa	Known RBP	33.46	■■■□□ 2.95
SNRPA1-215	ENST00000561187	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	33.46	■■■□□ 2.95
SNRPA1-215	ENST00000561187	GAK	O14976	1311 aa		33.46	■■■□□ 2.95
SNRPA1-215	ENST00000561187	BTD	P43251	543 aa		33.45	■■■□□ 2.95
SNRPA1-215	ENST00000561187	ZNF112	Q9UJU3	913 aa		33.45	■■■□□ 2.95
SNRPA1-215	ENST00000561187	TLR2	O60603	784 aa		33.44	■■■□□ 2.94
SNRPA1-215	ENST00000561187	MYC	P01106	439 aa	Predicted RBP	33.44	■■■□□ 2.94
SNRPA1-215	ENST00000561187	GORAB	Q5T7V8	394 aa		33.44	■■■□□ 2.94
SNRPA1-215	ENST00000561187	TMEM57	Q8N5G2	664 aa		33.44	■■■□□ 2.94
SNRPA1-215	ENST00000561187	DDX4	Q9NQI0	724 aa	Known RBP	33.44	■■■□□ 2.94
SNRPA1-215	ENST00000561187	CPA4	Q9UI42	421 aa		33.43	■■■□□ 2.94
SNRPA1-215	ENST00000561187	RFX7	Q2KHR2	1363 aa		33.43	■■■□□ 2.94
SNRPA1-215	ENST00000561187	SLC34A2	O95436	690 aa		33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	MECOM	Q03112	1051 aa		33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	PRPF38B	Q5VTL8	546 aa	Known RBP	33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	ERICH6	Q7L0X2	663 aa		33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	SH3BP5L	Q7L8J4	393 aa		33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	MROH7-TTC4	A0A0A0MT08	1334 aa		33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	ATRNL1	Q5VV63	1379 aa		33.42	■■■□□ 2.94
SNRPA1-215	ENST00000561187	SPTY2D1	Q68D10	685 aa	Predicted RBP	33.41	■■■□□ 2.94
SNRPA1-215	ENST00000561187	TBC1D9	Q6ZT07	1266 aa		33.41	■■■□□ 2.94
SNRPA1-215	ENST00000561187	ARMC5	Q96C12	935 aa		33.41	■■■□□ 2.94
SNRPA1-215	ENST00000561187	IDI2	Q9BXS1	227 aa		33.41	■■■□□ 2.94
SNRPA1-215	ENST00000561187	HMG20B	Q9P0W2	317 aa		33.41	■■■□□ 2.94
SNRPA1-215	ENST00000561187	PDS5A	Q29RF7	1337 aa	Known RBP	33.41	■■■□□ 2.94
SNRPA1-215	ENST00000561187	PDHX	O00330	501 aa		33.4	■■■□□ 2.94
SNRPA1-215	ENST00000561187	G3BP1	Q13283	466 aa	Known RBP eCLIP	33.4	■■■□□ 2.94
SNRPA1-215	ENST00000561187	SLC9C1	Q4G0N8	1177 aa		33.4	■■■□□ 2.94

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