RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	CDC42EP5	Q6NZY7	148 aa		31.38	■■■□□ 2.61
TCF12-222	ENST00000561152	TMED8	Q6PL24	325 aa	Predicted RBP	31.38	■■■□□ 2.61
TCF12-222	ENST00000561152	FAM83A	Q86UY5	434 aa		31.38	■■■□□ 2.61
TCF12-222	ENST00000561152	PIH1D3	Q9NQM4	214 aa	Known RBP	31.38	■■■□□ 2.61
TCF12-222	ENST00000561152	USP40	Q9NVE5	1235 aa		31.38	■■■□□ 2.61
TCF12-222	ENST00000561152	BTD	P43251	543 aa		31.37	■■■□□ 2.61
TCF12-222	ENST00000561152	HUNK	P57058	714 aa		31.37	■■■□□ 2.61
TCF12-222	ENST00000561152	NOL10	Q9BSC4	688 aa	Known RBP	31.37	■■■□□ 2.61
TCF12-222	ENST00000561152	ECHDC1	Q9NTX5	307 aa		31.37	■■■□□ 2.61
TCF12-222	ENST00000561152	GPR75-ASB3	A0A0A6YYF3	556 aa		31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	IDH1	O75874	414 aa	Known RBP	31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	ECE1	P42892	770 aa		31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	CACNB3	P54284	484 aa		31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	MAP3K12	Q12852	859 aa		31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	TTLL12	Q14166	644 aa	Predicted RBP	31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	ZNF384	Q8TF68	577 aa		31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	DNAJC2	Q99543	621 aa	Known RBP	31.36	■■■□□ 2.61
TCF12-222	ENST00000561152	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.35	■■■□□ 2.61
TCF12-222	ENST00000561152	DOCK2	Q92608	1830 aa		31.35	■■■□□ 2.61
TCF12-222	ENST00000561152	MAP4K4	O95819	1239 aa	Predicted RBP	31.35	■■■□□ 2.61
TCF12-222	ENST00000561152	ANKRD45	Q5TZF3	282 aa		31.35	■■■□□ 2.61
TCF12-222	ENST00000561152	NDUFB9	Q9Y6M9	179 aa		31.35	■■■□□ 2.61
TCF12-222	ENST00000561152	ARMC9	Q7Z3E5	817 aa		31.34	■■■□□ 2.61
TCF12-222	ENST00000561152	BOLA2	Q9H3K6	86 aa		31.34	■■■□□ 2.61
TCF12-222	ENST00000561152	PPP1R12B	O60237	982 aa	Predicted RBP	31.33	■■■□□ 2.61
TCF12-222	ENST00000561152	BAG3	O95817	575 aa		31.33	■■■□□ 2.61
TCF12-222	ENST00000561152	HOOK2	Q96ED9	719 aa		31.33	■■■□□ 2.61
TCF12-222	ENST00000561152	HAUS7	Q99871	368 aa		31.33	■■■□□ 2.61
TCF12-222	ENST00000561152	TMEM39B	Q9GZU3	492 aa		31.33	■■■□□ 2.61
TCF12-222	ENST00000561152	ANTXR1	Q9H6X2	564 aa		31.33	■■■□□ 2.61
TCF12-222	ENST00000561152	RPAP1	Q9BWH6	1393 aa	Predicted RBP	31.32	■■■□□ 2.6
TCF12-222	ENST00000561152	GOLIM4	O00461	696 aa		31.32	■■■□□ 2.6
TCF12-222	ENST00000561152	NBPF12	Q5TAG4	269 aa	Predicted RBP	31.32	■■■□□ 2.6
TCF12-222	ENST00000561152	FAM151A	Q8WW52	585 aa		31.32	■■■□□ 2.6
TCF12-222	ENST00000561152	PAG1	Q9NWQ8	432 aa		31.32	■■■□□ 2.6
TCF12-222	ENST00000561152	TTC41P	Q6P2S7	1318 aa		31.31	■■■□□ 2.6
TCF12-222	ENST00000561152	VEGFB	P49765	207 aa		31.31	■■■□□ 2.6
TCF12-222	ENST00000561152	SMC5	Q8IY18	1101 aa		31.31	■■■□□ 2.6
TCF12-222	ENST00000561152	IDI2	Q9BXS1	227 aa		31.31	■■■□□ 2.6
TCF12-222	ENST00000561152	PLCG2	P16885	1265 aa		31.3	■■■□□ 2.6
TCF12-222	ENST00000561152	RGMB	Q6NW40	437 aa		31.3	■■■□□ 2.6
TCF12-222	ENST00000561152	CAPNS2	Q96L46	248 aa		31.3	■■■□□ 2.6
TCF12-222	ENST00000561152	TEPSIN	Q96N21	525 aa		31.3	■■■□□ 2.6
TCF12-222	ENST00000561152	WDR33	Q9C0J8	1336 aa	Known RBP	31.29	■■■□□ 2.6
TCF12-222	ENST00000561152	MAGEB6	Q8N7X4	407 aa		31.29	■■■□□ 2.6
TCF12-222	ENST00000561152	SSC5D	A1L4H1	1573 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	ERC2	O15083	957 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	ENTPD3	O75355	529 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	IGHD	P01880	384 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	CYP7A1	P22680	504 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	NFIA	Q12857	509 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	PRKG1	Q13976	671 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	CYP4F22	Q6NT55	531 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	CERS3	Q8IU89	383 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	JMY	Q8N9B5	988 aa		31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	ANGEL1	Q9UNK9	670 aa	Known RBP	31.28	■■■□□ 2.6
TCF12-222	ENST00000561152	RHBDL3	P58872	404 aa		31.27	■■■□□ 2.6
TCF12-222	ENST00000561152	TCP10	Q12799	353 aa		31.27	■■■□□ 2.6
TCF12-222	ENST00000561152	CCDC102A	Q96A19	550 aa		31.27	■■■□□ 2.6
TCF12-222	ENST00000561152	FAM198A	Q9UFP1	575 aa		31.27	■■■□□ 2.6
TCF12-222	ENST00000561152	UBE2Q2L	H0YL09	131 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	MX1	P20591	662 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	IREB2	P48200	963 aa	Known RBP	31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	RGS3	P49796	1198 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	ZNF157	P51786	506 aa	Predicted RBP	31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	PPP4C	P60510	307 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	GRM1	Q13255	1194 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	MAP3K11	Q16584	847 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	MOB2	Q70IA6	237 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	31.26	■■■□□ 2.59	5e-8	■■■■□ 23.9
TCF12-222	ENST00000561152	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	RFX7	Q2KHR2	1363 aa		31.26	■■■□□ 2.59
TCF12-222	ENST00000561152	UNCX	A6NJT0	531 aa		31.25	■■■□□ 2.59
TCF12-222	ENST00000561152	NPM3	O75607	178 aa	Known RBP	31.25	■■■□□ 2.59
TCF12-222	ENST00000561152	WDHD1	O75717	1129 aa	Predicted RBP	31.25	■■■□□ 2.59
TCF12-222	ENST00000561152	SLC9C2	Q5TAH2	1124 aa		31.25	■■■□□ 2.59
TCF12-222	ENST00000561152	AK9	Q5TCS8	1911 aa		31.25	■■■□□ 2.59
TCF12-222	ENST00000561152	DCAF15	Q66K64	600 aa		31.24	■■■□□ 2.59
TCF12-222	ENST00000561152	ADGRA1	Q86SQ6	560 aa		31.24	■■■□□ 2.59
TCF12-222	ENST00000561152	TEX11	Q8IYF3	940 aa		31.24	■■■□□ 2.59
TCF12-222	ENST00000561152	EDC3	Q96F86	508 aa	Known RBP	31.24	■■■□□ 2.59
TCF12-222	ENST00000561152	GLRX3	O76003	335 aa	Known RBP	31.23	■■■□□ 2.59
TCF12-222	ENST00000561152	PICALM	Q13492	652 aa		31.23	■■■□□ 2.59
TCF12-222	ENST00000561152	CDAN1	Q8IWY9	1227 aa		31.23	■■■□□ 2.59
TCF12-222	ENST00000561152	PDE6A	P16499	860 aa		31.22	■■■□□ 2.59
TCF12-222	ENST00000561152	LDLRAD1	Q5T700	205 aa		31.22	■■■□□ 2.59
TCF12-222	ENST00000561152	TSHZ3	Q63HK5	1081 aa		31.22	■■■□□ 2.59
TCF12-222	ENST00000561152	B4GALNT3	Q6L9W6	998 aa		31.22	■■■□□ 2.59
TCF12-222	ENST00000561152	ZSCAN25	Q6NSZ9	544 aa		31.22	■■■□□ 2.59
TCF12-222	ENST00000561152	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.22	■■■□□ 2.59
TCF12-222	ENST00000561152	USP2	O75604	605 aa	Predicted RBP	31.21	■■■□□ 2.59
TCF12-222	ENST00000561152	MAP2K2	P36507	400 aa		31.21	■■■□□ 2.59
TCF12-222	ENST00000561152	NOG	Q13253	232 aa		31.21	■■■□□ 2.59
TCF12-222	ENST00000561152	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	31.21	■■■□□ 2.59
TCF12-222	ENST00000561152	OTUD7A	Q8TE49	926 aa	Predicted RBP	31.21	■■■□□ 2.59
TCF12-222	ENST00000561152	LNPK	Q9C0E8	428 aa		31.21	■■■□□ 2.59
TCF12-222	ENST00000561152	CENPB	P07199	599 aa	Predicted RBP	31.2	■■■□□ 2.59
TCF12-222	ENST00000561152	NUCB1	Q02818	461 aa		31.2	■■■□□ 2.59
TCF12-222	ENST00000561152	CHD1L	Q86WJ1	897 aa		31.2	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms