RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 ZFPM1Q8IX07 1006 aa16.69■□□□□ 0.26
PSME1-208ENST00000561059 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
PSME1-208ENST00000561059 ZFYVE28Q9HCC9 887 aa16.69■□□□□ 0.26
PSME1-208ENST00000561059 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
PSME1-208ENST00000561059 SUGT1Q9Y2Z0 365 aa16.69■□□□□ 0.26
PSME1-208ENST00000561059 BTBD19C9JJ37 291 aa16.68■□□□□ 0.26
PSME1-208ENST00000561059 CIAO1O76071 339 aa16.68■□□□□ 0.26
PSME1-208ENST00000561059 LDHBP07195 334 aaKnown RBP16.68■□□□□ 0.26
PSME1-208ENST00000561059 FKBP1CQ5VVH2 108 aa16.68■□□□□ 0.26
PSME1-208ENST00000561059 ERO1BQ86YB8 467 aa16.68■□□□□ 0.26
PSME1-208ENST00000561059 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
PSME1-208ENST00000561059 ARHGAP39Q9C0H5 1083 aa16.68■□□□□ 0.26
PSME1-208ENST00000561059 LAMB1P07942 1786 aa16.68■□□□□ 0.26
PSME1-208ENST00000561059 SLURP2P0DP57 97 aa16.67■□□□□ 0.26
PSME1-208ENST00000561059 RARSP54136 660 aaKnown RBP16.67■□□□□ 0.26
PSME1-208ENST00000561059 TIMM10P62072 90 aa16.67■□□□□ 0.26
PSME1-208ENST00000561059 PRPF38BQ5VTL8 546 aaKnown RBP16.67■□□□□ 0.26
PSME1-208ENST00000561059 DCAF15Q66K64 600 aa16.67■□□□□ 0.26
PSME1-208ENST00000561059 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
PSME1-208ENST00000561059 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
PSME1-208ENST00000561059 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
PSME1-208ENST00000561059 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
PSME1-208ENST00000561059 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
PSME1-208ENST00000561059 FAM198AQ9UFP1 575 aa16.67■□□□□ 0.26
PSME1-208ENST00000561059 CETPP11597 493 aa16.66■□□□□ 0.26
PSME1-208ENST00000561059 EN2P19622 333 aaPredicted RBP16.66■□□□□ 0.26
PSME1-208ENST00000561059 IL15P40933 162 aaPredicted RBP16.66■□□□□ 0.26
PSME1-208ENST00000561059 SNAPC2Q13487 334 aa16.66■□□□□ 0.26
PSME1-208ENST00000561059 CCDC102BQ68D86 513 aa16.66■□□□□ 0.26
PSME1-208ENST00000561059 PTCH2Q9Y6C5 1203 aa16.66■□□□□ 0.26
PSME1-208ENST00000561059 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.66■□□□□ 0.26
PSME1-208ENST00000561059 TFCP2Q12800 502 aa16.65■□□□□ 0.26
PSME1-208ENST00000561059 PPIL2Q13356 520 aa16.65■□□□□ 0.26
PSME1-208ENST00000561059 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
PSME1-208ENST00000561059 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
PSME1-208ENST00000561059 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.26
PSME1-208ENST00000561059 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
PSME1-208ENST00000561059 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
PSME1-208ENST00000561059 RASGRF1Q13972 1273 aa16.64■□□□□ 0.25
PSME1-208ENST00000561059 HOOK2Q96ED9 719 aa16.64■□□□□ 0.25
PSME1-208ENST00000561059 COPRSQ9NQ92 184 aa16.64■□□□□ 0.25
PSME1-208ENST00000561059 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
PSME1-208ENST00000561059 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
PSME1-208ENST00000561059 TLR2O60603 784 aa16.63■□□□□ 0.25
PSME1-208ENST00000561059 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
PSME1-208ENST00000561059 RGS3P49796 1198 aa16.63■□□□□ 0.25
PSME1-208ENST00000561059 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
PSME1-208ENST00000561059 SH3TC2Q8TF17 1288 aa16.63■□□□□ 0.25
PSME1-208ENST00000561059 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
PSME1-208ENST00000561059 ARMC5Q96C12 935 aa16.63■□□□□ 0.25
PSME1-208ENST00000561059 CPA4Q9UI42 421 aa16.63■□□□□ 0.25
PSME1-208ENST00000561059 A0A1B0GUL7 405 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 BCAR3O75815 825 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 PPATQ06203 517 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 PICALMQ13492 652 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 SLC9C1Q4G0N8 1177 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 SH3BP5LQ7L8J4 393 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 DZIP1Q86YF9 867 aaKnown RBP16.62■□□□□ 0.25
PSME1-208ENST00000561059 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
PSME1-208ENST00000561059 PDHXO00330 501 aa16.61■□□□□ 0.25
PSME1-208ENST00000561059 CTGFP29279 349 aa16.61■□□□□ 0.25
PSME1-208ENST00000561059 LACTBP83111 547 aaPredicted RBP16.61■□□□□ 0.25
PSME1-208ENST00000561059 PI16Q6UXB8 463 aa16.61■□□□□ 0.25
PSME1-208ENST00000561059 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
PSME1-208ENST00000561059 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
PSME1-208ENST00000561059 NEUROD6Q96NK8 337 aa16.61■□□□□ 0.25
PSME1-208ENST00000561059 DDX4Q9NQI0 724 aaKnown RBP16.61■□□□□ 0.25
PSME1-208ENST00000561059 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
PSME1-208ENST00000561059 KIAA0100Q14667 2235 aaKnown RBP16.61■□□□□ 0.25
PSME1-208ENST00000561059 SEMA3EO15041 775 aa16.6■□□□□ 0.25
PSME1-208ENST00000561059 WDHD1O75717 1129 aaPredicted RBP16.6■□□□□ 0.25
PSME1-208ENST00000561059 TRIM27P14373 513 aa16.6■□□□□ 0.25
PSME1-208ENST00000561059 BTDP43251 543 aa16.6■□□□□ 0.25
PSME1-208ENST00000561059 MOGSQ13724 837 aa16.6■□□□□ 0.25
PSME1-208ENST00000561059 HDAC5Q9UQL6 1122 aa16.6■□□□□ 0.25
PSME1-208ENST00000561059 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 GNAI3P08754 354 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 KIF22Q14807 665 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 SLC4A8Q2Y0W8 1093 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 C17orf99Q6UX52 265 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 TBC1D9Q6ZT07 1266 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
PSME1-208ENST00000561059 ZNF384Q8TF68 577 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 KCNH4Q9UQ05 1017 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 GAKO14976 1311 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 ATRNL1Q5VV63 1379 aa16.59■□□□□ 0.25
PSME1-208ENST00000561059 AK9Q5TCS8 1911 aa16.58■□□□□ 0.25
PSME1-208ENST00000561059 DDTLA6NHG4 134 aaPredicted RBP16.58■□□□□ 0.24
PSME1-208ENST00000561059 FAM196BA6NMK8 535 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 PHF20L1A8MW92 1017 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 CYP2C8P10632 490 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 MECOMQ03112 1051 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 ARHGEF6Q15052 776 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 ANKRD23Q86SG2 305 aa16.58■□□□□ 0.24
PSME1-208ENST00000561059 ZGPATQ8N5A5 531 aaKnown RBP16.58■□□□□ 0.24
PSME1-208ENST00000561059 ARHGAP45Q92619 1136 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms