RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 MCOLN1Q9GZU1 580 aa9.22□□□□□ -0.93
GABPB1-211ENST00000561010 ZNF804BA4D1E1 1349 aa9.22□□□□□ -0.93
GABPB1-211ENST00000561010 PLIN1O60240 522 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 TRPA1O75762 1119 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 CSF1RP07333 972 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 SLC10A3P09131 477 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 GTF2IP78347 998 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 PODNQ7Z5L7 613 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 PACS2Q86VP3 889 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 LINS1Q8NG48 757 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 PLA2G12BQ9BX93 195 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 AOX1Q06278 1338 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 ZSWIM8A7E2V4 1837 aa9.21□□□□□ -0.94
GABPB1-211ENST00000561010 F8W031 263 aaPredicted RBP9.2□□□□□ -0.94
GABPB1-211ENST00000561010 WNT10BO00744 389 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 OATP04181 439 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 KCNJ4P48050 445 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
GABPB1-211ENST00000561010 BEND3Q5T5X7 828 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 TTLL5Q6EMB2 1281 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 WDR63Q8IWG1 891 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 CERS5Q8N5B7 392 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 MPHOSPH8Q99549 860 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 COA1Q9GZY4 146 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 MYH16Q9H6N6 1097 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 RNF186Q9NXI6 227 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 LEMD3Q9Y2U8 911 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 IRS2Q9Y4H2 1338 aa9.2□□□□□ -0.94
GABPB1-211ENST00000561010 MYH2Q9UKX2 1941 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 KIAA0100Q14667 2235 aaKnown RBP9.19□□□□□ -0.94
GABPB1-211ENST00000561010 ANKRD18BA2A2Z9 1011 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 CA12O43570 354 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 STRIP1Q5VSL9 837 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 SLC4A10Q6U841 1118 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 LMBR1LQ6UX01 489 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 CD209Q9NNX6 404 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 ADGRG1Q9Y653 693 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 PITPNM2Q9BZ72 1349 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 SSC5DA1L4H1 1573 aa9.19□□□□□ -0.94
GABPB1-211ENST00000561010 TRIM66O15016 1216 aa9.18□□□□□ -0.94
GABPB1-211ENST00000561010 SUCLG2Q96I99 432 aa9.18□□□□□ -0.94
GABPB1-211ENST00000561010 PUS3Q9BZE2 481 aaKnown RBP9.18□□□□□ -0.94
GABPB1-211ENST00000561010 ANKRD2Q9GZV1 360 aa9.18□□□□□ -0.94
GABPB1-211ENST00000561010 FAM198AQ9UFP1 575 aa9.18□□□□□ -0.94
GABPB1-211ENST00000561010 MYO5AQ9Y4I1 1855 aaKnown RBP9.17□□□□□ -0.94
GABPB1-211ENST00000561010 CLRN2A0PK11 232 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 GRM8O00222 908 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 PTPN12Q05209 780 aaKnown RBP9.17□□□□□ -0.94
GABPB1-211ENST00000561010 IFIT5Q13325 482 aaKnown RBP9.17□□□□□ -0.94
GABPB1-211ENST00000561010 OGFOD1Q8N543 542 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 KAZALD1Q96I82 304 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 KIAA1468Q9P260 1216 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
GABPB1-211ENST00000561010 MYO3BQ8WXR4 1341 aa9.16□□□□□ -0.94
GABPB1-211ENST00000561010 SOX10P56693 466 aa9.16□□□□□ -0.94
GABPB1-211ENST00000561010 TAF7LQ5H9L4 462 aa9.16□□□□□ -0.94
GABPB1-211ENST00000561010 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
GABPB1-211ENST00000561010 METTL3Q86U44 580 aaKnown RBP9.16□□□□□ -0.94
GABPB1-211ENST00000561010 TATDN2Q93075 761 aa9.16□□□□□ -0.94
GABPB1-211ENST00000561010 ZBED3Q96IU2 234 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-211ENST00000561010 R3HDMLQ9H3Y0 253 aa9.16□□□□□ -0.94
GABPB1-211ENST00000561010 CNNM1Q9NRU3 951 aa9.16□□□□□ -0.94
GABPB1-211ENST00000561010 C9orf78Q9NZ63 289 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-211ENST00000561010 IQSEC3Q9UPP2 1182 aaPredicted RBP9.16□□□□□ -0.94
GABPB1-211ENST00000561010 NBPF7P0C2Y1 421 aaPredicted RBP9.15□□□□□ -0.94
GABPB1-211ENST00000561010 GYG1P46976 350 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 DLGAP5Q15398 846 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 GRIK5Q16478 980 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 CCDC57Q2TAC2 916 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 CFAP100Q494V2 611 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 LDHAL6AQ6ZMR3 332 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 PXYLP1Q8TE99 480 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 CLMNQ96JQ2 1002 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 PRMT6Q96LA8 375 aaPredicted RBP9.15□□□□□ -0.94
GABPB1-211ENST00000561010 NBPF3Q9H094 633 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 SAGE1Q9NXZ1 904 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 HDAC9Q9UKV0 1011 aa9.15□□□□□ -0.94
GABPB1-211ENST00000561010 ANGEL1Q9UNK9 670 aaKnown RBP9.15□□□□□ -0.94
GABPB1-211ENST00000561010 MGAMO43451 1857 aa9.15□□□□□ -0.95
GABPB1-211ENST00000561010 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 PTPRFP10586 1907 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 IL1R1P14778 569 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 NF2P35240 595 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 RBM5P52756 815 aaKnown RBP eCLIP9.14□□□□□ -0.95
GABPB1-211ENST00000561010 FKBP1BP68106 108 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 MLLT1Q03111 559 aaPredicted RBP9.14□□□□□ -0.95
GABPB1-211ENST00000561010 PDE4DQ08499 809 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 AMHR2Q16671 573 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 LRRC24Q50LG9 513 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 ZNF804AQ7Z570 1209 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 APOBEC3FQ8IUX4 373 aaKnown RBP9.14□□□□□ -0.95
GABPB1-211ENST00000561010 MRPL50Q8N5N7 158 aaKnown RBP9.14□□□□□ -0.95
GABPB1-211ENST00000561010 KLHDC4Q8TBB5 520 aa9.14□□□□□ -0.95
GABPB1-211ENST00000561010 SRCIN1Q9C0H9 1055 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms