RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ECE1P42892 770 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 NFIAQ12857 509 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 MAP3K11Q16584 847 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 LDLRAD1Q5T700 205 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 RGMBQ6NW40 437 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 ANTXR1Q9H6X2 564 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 RAI14Q9P0K7 980 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 LRP2BPQ9P2M1 347 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 FAM198AQ9UFP1 575 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 FZD1Q9UP38 647 aa18.67■□□□□ 0.58
SNRPA1-213ENST00000560856 NF2P35240 595 aa18.66■□□□□ 0.58
SNRPA1-213ENST00000560856 RHBDL3P58872 404 aa18.66■□□□□ 0.58
SNRPA1-213ENST00000560856 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-213ENST00000560856 SUPT20HL1Q3ZLR7 823 aa18.66■□□□□ 0.58
SNRPA1-213ENST00000560856 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
SNRPA1-213ENST00000560856 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
SNRPA1-213ENST00000560856 RFX7Q2KHR2 1363 aa18.66■□□□□ 0.58
SNRPA1-213ENST00000560856 IGSF3O75054 1194 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 AOC2O75106 756 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 USP2O75604 605 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 BTDP43251 543 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 TNNI2P48788 182 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 PRKG1Q13976 671 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 PAXIP1Q6ZW49 1069 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 ZIC5Q96T25 663 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 IDI2Q9BXS1 227 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 TMOD2Q9NZR1 351 aa18.65■□□□□ 0.58
SNRPA1-213ENST00000560856 THSD7BQ9C0I4 1608 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 WDHD1O75717 1129 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 LDHCP07864 332 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 ATP5JP18859 108 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 GSTO1P78417 241 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 ADGRA1Q86SQ6 560 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 ZFPM1Q8IX07 1006 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 FAM151AQ8WW52 585 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 BCL11AQ9H165 835 aa18.64■□□□□ 0.57
SNRPA1-213ENST00000560856 SLC10A3P09131 477 aa18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 MAP2K2P36507 400 aa18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 ZNF157P51786 506 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 GRM1Q13255 1194 aa18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 TTLL12Q14166 644 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 ARMC9Q7Z3E5 817 aa18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 RASAL3Q86YV0 1011 aa18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 ANGEL1Q9UNK9 670 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 RPAP1Q9BWH6 1393 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-213ENST00000560856 PPP1R12BO60237 982 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-213ENST00000560856 PPP4CP60510 307 aa18.62■□□□□ 0.57
SNRPA1-213ENST00000560856 TCP10Q12799 353 aa18.62■□□□□ 0.57
SNRPA1-213ENST00000560856 CCDC102AQ96A19 550 aa18.62■□□□□ 0.57
SNRPA1-213ENST00000560856 EDC3Q96F86 508 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-213ENST00000560856 DDX4Q9NQI0 724 aaKnown RBP18.62■□□□□ 0.57
SNRPA1-213ENST00000560856 WBP1LQ9NX94 342 aa18.62■□□□□ 0.57
SNRPA1-213ENST00000560856 ENTPD3O75355 529 aa18.61■□□□□ 0.57
SNRPA1-213ENST00000560856 RGS3P49796 1198 aa18.61■□□□□ 0.57
SNRPA1-213ENST00000560856 SH3BP5LQ7L8J4 393 aa18.61■□□□□ 0.57
SNRPA1-213ENST00000560856 HAUS7Q99871 368 aa18.61■□□□□ 0.57
SNRPA1-213ENST00000560856 BOLA2Q9H3K6 86 aa18.61■□□□□ 0.57
SNRPA1-213ENST00000560856 NPM3O75607 178 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-213ENST00000560856 IDH1O75874 414 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-213ENST00000560856 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
SNRPA1-213ENST00000560856 HSPA1AP0DMV8 641 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-213ENST00000560856 HSPA1BP0DMV9 641 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-213ENST00000560856 NOGQ13253 232 aa18.6■□□□□ 0.57
SNRPA1-213ENST00000560856 CLMNQ96JQ2 1002 aa18.6■□□□□ 0.57
SNRPA1-213ENST00000560856 DOCK2Q92608 1830 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 UNCXA6NJT0 531 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 GOLIM4O00461 696 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 IGHDP01880 384 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 CYP7A1P22680 504 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 GCC1Q96CN9 775 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 ECHDC1Q9NTX5 307 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 MAST2Q6P0Q8 1798 aa18.59■□□□□ 0.57
SNRPA1-213ENST00000560856 ATRNL1Q5VV63 1379 aa18.58■□□□□ 0.57
SNRPA1-213ENST00000560856 SALL3Q9BXA9 1300 aa18.58■□□□□ 0.57
SNRPA1-213ENST00000560856 IREB2P48200 963 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 IRX6P78412 446 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 KIF23Q02241 960 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 MAP3K12Q12852 859 aa18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 TTF1Q15361 905 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 SMC5Q8IY18 1101 aa18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 MAGEB6Q8N7X4 407 aa18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 SH3RF3Q8TEJ3 882 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 PAG1Q9NWQ8 432 aa18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 AATFQ9NY61 560 aaKnown RBP eCLIP18.58■□□□□ 0.56
SNRPA1-213ENST00000560856 DDTLA6NHG4 134 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-213ENST00000560856 DYNLL1P63167 89 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-213ENST00000560856 MAP2K1Q02750 393 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-213ENST00000560856 MAP3K10Q02779 954 aa18.57■□□□□ 0.56
SNRPA1-213ENST00000560856 TSHZ3Q63HK5 1081 aa18.57■□□□□ 0.56
SNRPA1-213ENST00000560856 TMED8Q6PL24 325 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-213ENST00000560856 TCRBV5S4A2TA0A5A2 114 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 BAG3O95817 575 aa18.56■□□□□ 0.56
SNRPA1-213ENST00000560856 PDE6AP16499 860 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms