RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 KCNJ4P48050 445 aa9.72□□□□□ -0.85
CPNE6-218ENST00000560845 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
CPNE6-218ENST00000560845 PRAMEF18Q5VWM3 479 aa9.72□□□□□ -0.85
CPNE6-218ENST00000560845 RUFY2Q8WXA3 655 aa9.72□□□□□ -0.85
CPNE6-218ENST00000560845 EDC3Q96F86 508 aaKnown RBP9.72□□□□□ -0.85
CPNE6-218ENST00000560845 ZNF512BQ96KM6 892 aaPredicted RBP9.72□□□□□ -0.85
CPNE6-218ENST00000560845 PAG1Q9NWQ8 432 aa9.72□□□□□ -0.85
CPNE6-218ENST00000560845 MINPP1Q9UNW1 487 aa9.72□□□□□ -0.85
CPNE6-218ENST00000560845 RAD50Q92878 1312 aa9.72□□□□□ -0.85
CPNE6-218ENST00000560845 MED23Q9ULK4 1368 aa9.72□□□□□ -0.85
CPNE6-218ENST00000560845 GPR25O00155 361 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.86
CPNE6-218ENST00000560845 PHKA1P46020 1223 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 UBE4AQ14139 1066 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 NBPF9Q3BBW0 867 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 NOM1Q5C9Z4 860 aaKnown RBP9.71□□□□□ -0.86
CPNE6-218ENST00000560845 DACT2Q5SW24 774 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 CCDC102BQ68D86 513 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 KBTBD3Q8NAB2 608 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 MXD3Q9BW11 206 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
CPNE6-218ENST00000560845 PSME4Q14997 1843 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 WTIPA6NIX2 430 aaPredicted RBP9.7□□□□□ -0.86
CPNE6-218ENST00000560845 SNAP23O00161 211 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 WNT10BO00744 389 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 SGSM2O43147 1006 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 NF2P35240 595 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 MCAMP43121 646 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 TM4SF4P48230 202 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 RBM25P49756 843 aaKnown RBP9.7□□□□□ -0.86
CPNE6-218ENST00000560845 SREBF2Q12772 1141 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
CPNE6-218ENST00000560845 NMIQ13287 307 aaPredicted RBP9.7□□□□□ -0.86
CPNE6-218ENST00000560845 FBXO46Q6PJ61 603 aaPredicted RBP9.7□□□□□ -0.86
CPNE6-218ENST00000560845 CWC27Q6UX04 472 aaKnown RBP9.7□□□□□ -0.86
CPNE6-218ENST00000560845 OGFOD1Q8N543 542 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 MYO3BQ8WXR4 1341 aa9.7□□□□□ -0.86
CPNE6-218ENST00000560845 ZNF804BA4D1E1 1349 aa9.69□□□□□ -0.86
CPNE6-218ENST00000560845 DEKP35659 375 aaKnown RBP9.69□□□□□ -0.86
CPNE6-218ENST00000560845 ZAP70P43403 619 aa9.69□□□□□ -0.86
CPNE6-218ENST00000560845 LRRFIP1Q32MZ4 808 aaKnown RBP9.69□□□□□ -0.86
CPNE6-218ENST00000560845 PI16Q6UXB8 463 aa9.69□□□□□ -0.86
CPNE6-218ENST00000560845 TICAM2Q86XR7 235 aa9.69□□□□□ -0.86
CPNE6-218ENST00000560845 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
CPNE6-218ENST00000560845 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
CPNE6-218ENST00000560845 IL25Q9H293 177 aa9.69□□□□□ -0.86
CPNE6-218ENST00000560845 GNL3LQ9NVN8 582 aaKnown RBP9.69□□□□□ -0.86
CPNE6-218ENST00000560845 A0A0D9SFI3 127 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 EPB41L2O43491 1005 aaKnown RBP9.68□□□□□ -0.86
CPNE6-218ENST00000560845 FKTNO75072 461 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 MCCP23508 829 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 BCAMP50895 628 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 RASGRF1Q13972 1273 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 TTF1Q15361 905 aaPredicted RBP9.68□□□□□ -0.86
CPNE6-218ENST00000560845 CAVIN4Q5BKX8 364 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 STRIP1Q5VSL9 837 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 KIAA1211Q6ZU35 1233 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 ARMC9Q7Z3E5 817 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 APOBEC3FQ8IUX4 373 aaKnown RBP9.68□□□□□ -0.86
CPNE6-218ENST00000560845 SPATA5Q8NB90 893 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 FAM227BQ96M60 508 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 USP26Q9BXU7 913 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 COA1Q9GZY4 146 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 ANTXR1Q9H6X2 564 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 HMG20BQ9P0W2 317 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 LEMD3Q9Y2U8 911 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 HTTP42858 3142 aa9.68□□□□□ -0.86
CPNE6-218ENST00000560845 COL1A1P02452 1464 aaPredicted RBP9.67□□□□□ -0.86
CPNE6-218ENST00000560845 ZFYP08048 801 aaPredicted RBP9.67□□□□□ -0.86
CPNE6-218ENST00000560845 KLRK1P26718 216 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 GYG1P46976 350 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 MMP14P50281 582 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 PRKG1Q13976 671 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 NFKBIBQ15653 356 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 SPRYD7Q5W111 196 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.67□□□□□ -0.86
CPNE6-218ENST00000560845 R3HDMLQ9H3Y0 253 aa9.67□□□□□ -0.86
CPNE6-218ENST00000560845 ZNF646O15015 1829 aaPredicted RBP9.66□□□□□ -0.86
CPNE6-218ENST00000560845 CCDC171Q6TFL3 1326 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 IRS2Q9Y4H2 1338 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 SEMA3EO15041 775 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 RNF113AO15541 343 aaKnown RBP9.66□□□□□ -0.86
CPNE6-218ENST00000560845 ALDH1A1P00352 501 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 CYP2E1P05181 493 aaPredicted RBP9.66□□□□□ -0.86
CPNE6-218ENST00000560845 ZMYM1Q5SVZ6 1142 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 LDLRAD1Q5T700 205 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 TTLL5Q6EMB2 1281 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 FBXO33Q7Z6M2 555 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 TXNRD3Q86VQ6 643 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 KIAA0825Q8IV33 1275 aa9.66□□□□□ -0.86
CPNE6-218ENST00000560845 ZBED3Q96IU2 234 aaPredicted RBP9.66□□□□□ -0.86
CPNE6-218ENST00000560845 FAM84BQ96KN1 310 aaPredicted RBP9.66□□□□□ -0.86
CPNE6-218ENST00000560845 LSG1Q9H089 658 aaKnown RBP9.66□□□□□ -0.86
CPNE6-218ENST00000560845 PIH1D3Q9NQM4 214 aaKnown RBP9.66□□□□□ -0.86
CPNE6-218ENST00000560845 ANGEL1Q9UNK9 670 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms