RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 USP17L4A6NCW7 530 aa8.71□□□□□ -1.02
HERC1-208ENST00000560462 DNAJB2P25686 324 aa8.71□□□□□ -1.02
HERC1-208ENST00000560462 FLT3LGP49771 235 aa8.71□□□□□ -1.02
HERC1-208ENST00000560462 COL9A2Q14055 689 aaPredicted RBP8.71□□□□□ -1.02
HERC1-208ENST00000560462 CSPP1Q1MSJ5 1256 aa8.71□□□□□ -1.02
HERC1-208ENST00000560462 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.02
HERC1-208ENST00000560462 TBC1D16Q8TBP0 767 aa8.71□□□□□ -1.02
HERC1-208ENST00000560462 TMC2Q8TDI7 906 aa8.71□□□□□ -1.02
HERC1-208ENST00000560462 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
HERC1-208ENST00000560462 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.02
HERC1-208ENST00000560462 IRF5Q13568 498 aa8.7□□□□□ -1.02
HERC1-208ENST00000560462 IGSF5Q9NSI5 407 aa8.7□□□□□ -1.02
HERC1-208ENST00000560462 OGDHLQ9ULD0 1010 aa8.7□□□□□ -1.02
HERC1-208ENST00000560462 MAP3K15Q6ZN16 1313 aa8.7□□□□□ -1.02
HERC1-208ENST00000560462 REV3LO60673 3130 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 CFAP47Q6ZTR5 3102 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 GFRA3O60609 400 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 COL6A1P12109 1028 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 IGFBP4P22692 258 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 ZNF34Q8IZ26 560 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 MTMR14Q8NCE2 650 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 PRDM12Q9H4Q4 367 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 DCHS1Q96JQ0 3298 aa8.69□□□□□ -1.02
HERC1-208ENST00000560462 CHD6Q8TD26 2715 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 KCNQ3O43525 872 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
HERC1-208ENST00000560462 MMP14P50281 582 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 CLCN6P51797 869 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 HIC1Q14526 733 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 MTHFSDQ2M296 383 aaKnown RBP8.68□□□□□ -1.02
HERC1-208ENST00000560462 PARP10Q53GL7 1025 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 NBPF12Q5TAG4 269 aaPredicted RBP8.68□□□□□ -1.02
HERC1-208ENST00000560462 KIF6Q6ZMV9 814 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 NGEFQ8N5V2 710 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 TIFAQ96CG3 184 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 TESK2Q96S53 571 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 UTP14AQ9BVJ6 771 aaKnown RBP8.68□□□□□ -1.02
HERC1-208ENST00000560462 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
HERC1-208ENST00000560462 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
HERC1-208ENST00000560462 UNC79Q9P2D8 2635 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 HCLS1P14317 486 aaPredicted RBP8.67□□□□□ -1.02
HERC1-208ENST00000560462 SNAPC2Q13487 334 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 VGLL4Q14135 290 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 ADGRE1Q14246 886 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 ANKRD11Q6UB99 2663 aaPredicted RBP8.67□□□□□ -1.02
HERC1-208ENST00000560462 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.67□□□□□ -1.02
HERC1-208ENST00000560462 RIC3Q7Z5B4 369 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 RNPC3Q96LT9 517 aaKnown RBP8.67□□□□□ -1.02
HERC1-208ENST00000560462 ZFHX2Q9C0A1 2572 aaPredicted RBP8.67□□□□□ -1.02
HERC1-208ENST00000560462 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 C1orf115Q9H7X2 142 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 CHD9Q3L8U1 2897 aa8.67□□□□□ -1.02
HERC1-208ENST00000560462 ZNF804BA4D1E1 1349 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 MYO3BQ8WXR4 1341 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 TTLL13PA6NNM8 815 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 ERC2O15083 957 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 UFL1O94874 794 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 EVX2Q03828 476 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 TRIM26Q12899 539 aaPredicted RBP8.66□□□□□ -1.02
HERC1-208ENST00000560462 MXD3Q9BW11 206 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 CSADQ9Y600 493 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 LAMB2P55268 1798 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 ANKRD36CQ5JPF3 1778 aa8.66□□□□□ -1.02
HERC1-208ENST00000560462 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.02
HERC1-208ENST00000560462 OTOFQ9HC10 1997 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.65□□□□□ -1.02
HERC1-208ENST00000560462 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.65□□□□□ -1.02
HERC1-208ENST00000560462 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 SPDYE5A6NIY4 337 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 BTBD11A6QL63 1104 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 PDHXO00330 501 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 TNPO2O14787 897 aaKnown RBP8.65□□□□□ -1.02
HERC1-208ENST00000560462 TLL1O43897 1013 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 HMGCRP04035 888 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 MAP3K9P80192 1104 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
HERC1-208ENST00000560462 DACT2Q5SW24 774 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 PLPP6Q8IY26 295 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 CELF1Q92879 486 aaKnown RBP8.65□□□□□ -1.02
HERC1-208ENST00000560462 ZBED3Q96IU2 234 aaPredicted RBP8.65□□□□□ -1.02
HERC1-208ENST00000560462 NUP98P52948 1817 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 PSME4Q14997 1843 aa8.65□□□□□ -1.02
HERC1-208ENST00000560462 LTBP2Q14767 1821 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 A6NJR5 290 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 BCRP11274 1271 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 ID4P47928 161 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 ACAP1Q15027 740 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 GIGYF2Q6Y7W6 1299 aaKnown RBP8.64□□□□□ -1.03
HERC1-208ENST00000560462 TTLL7Q6ZT98 887 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 ANKRD23Q86SG2 305 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 IL17REQ8NFR9 667 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 BADQ92934 168 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 ANKIB1Q9P2G1 1089 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 GGA1Q9UJY5 639 aa8.64□□□□□ -1.03
HERC1-208ENST00000560462 APBB1O00213 710 aa8.63□□□□□ -1.03
HERC1-208ENST00000560462 ALADP13716 330 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms