RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-215ENST00000560424 FRAT2O75474 233 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-215ENST00000560424 CSF1RP07333 972 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 BCAMP50895 628 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 GCKRQ14397 625 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
SMAD3-215ENST00000560424 VPS37DQ86XT2 251 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 TDHQ8IZJ6 230 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 PAWRQ96IZ0 340 aaKnown RBP11.76□□□□□ -0.53
SMAD3-215ENST00000560424 GDF15Q99988 308 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 MTMR10Q9NXD2 777 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 FAM205AQ6ZU69 1335 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 IRS2Q9Y4H2 1338 aa11.76□□□□□ -0.53
SMAD3-215ENST00000560424 TNPO2O14787 897 aaKnown RBP11.75□□□□□ -0.53
SMAD3-215ENST00000560424 ELNP15502 786 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 HIBADHP31937 336 aaKnown RBP11.75□□□□□ -0.53
SMAD3-215ENST00000560424 CACNB3P54284 484 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 LRIT3Q3SXY7 679 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 LDHAL6AQ6ZMR3 332 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 UBE2OQ9C0C9 1292 aaKnown RBP11.75□□□□□ -0.53
SMAD3-215ENST00000560424 GABRQQ9UN88 632 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 ADGRA2Q96PE1 1338 aa11.75□□□□□ -0.53
SMAD3-215ENST00000560424 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 SYN1P17600 705 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 FLT3LGP49771 235 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 CCDC57Q2TAC2 916 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 MIGA2Q7L4E1 593 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 FAM83AQ86UY5 434 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
SMAD3-215ENST00000560424 A0A1B0GUL6 1792 aa11.73□□□□□ -0.53
SMAD3-215ENST00000560424 MGAMO43451 1857 aa11.73□□□□□ -0.53
SMAD3-215ENST00000560424 CYP2C8P10632 490 aa11.73□□□□□ -0.53
SMAD3-215ENST00000560424 GYG1P46976 350 aa11.73□□□□□ -0.53
SMAD3-215ENST00000560424 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-215ENST00000560424 ANKLE1Q8NAG6 615 aa11.73□□□□□ -0.53
SMAD3-215ENST00000560424 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
SMAD3-215ENST00000560424 SMCR8Q8TEV9 937 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-215ENST00000560424 TBC1D22AQ8WUA7 517 aa11.73□□□□□ -0.53
SMAD3-215ENST00000560424 COA7Q96BR5 231 aa11.73□□□□□ -0.53
SMAD3-215ENST00000560424 MAST3O60307 1309 aa11.72□□□□□ -0.53
SMAD3-215ENST00000560424 RPTORQ8N122 1335 aa11.72□□□□□ -0.53
SMAD3-215ENST00000560424 BCRP11274 1271 aa11.72□□□□□ -0.53
SMAD3-215ENST00000560424 INPP5BP32019 993 aa11.72□□□□□ -0.53
SMAD3-215ENST00000560424 MAGEA10P43363 369 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-215ENST00000560424 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
SMAD3-215ENST00000560424 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-215ENST00000560424 UBE4AQ14139 1066 aa11.72□□□□□ -0.53
SMAD3-215ENST00000560424 DIS3LQ8TF46 1054 aaKnown RBP11.72□□□□□ -0.53
SMAD3-215ENST00000560424 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
SMAD3-215ENST00000560424 PAK6Q9NQU5 681 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-215ENST00000560424 KCNH4Q9UQ05 1017 aa11.72□□□□□ -0.53
SMAD3-215ENST00000560424 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 RPAP1Q9BWH6 1393 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-215ENST00000560424 SLC4A2P04920 1241 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 CASP7P55210 303 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 IRF5Q13568 498 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 FKBP1CQ5VVH2 108 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 FASTKD5Q7L8L6 764 aaKnown RBP11.71□□□□□ -0.53
SMAD3-215ENST00000560424 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
SMAD3-215ENST00000560424 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMAD3-215ENST00000560424 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 LMBR1LQ6UX01 489 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 GADL1Q6ZQY3 521 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 ZNF594Q96JF6 807 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-215ENST00000560424 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 C11orf49Q9H6J7 331 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 PICK1Q9NRD5 415 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-215ENST00000560424 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
SMAD3-215ENST00000560424 CXCL11O14625 94 aa11.69□□□□□ -0.54
SMAD3-215ENST00000560424 FLIIQ13045 1269 aa11.69□□□□□ -0.54
SMAD3-215ENST00000560424 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-215ENST00000560424 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
SMAD3-215ENST00000560424 HMX1Q9NP08 348 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-215ENST00000560424 PRDM6Q9NQX0 595 aa11.69□□□□□ -0.54
SMAD3-215ENST00000560424 APAF1O14727 1248 aa11.68□□□□□ -0.54
SMAD3-215ENST00000560424 HMGCRP04035 888 aa11.68□□□□□ -0.54
SMAD3-215ENST00000560424 FOXO4P98177 505 aa11.68□□□□□ -0.54
SMAD3-215ENST00000560424 TCP10Q12799 353 aa11.68□□□□□ -0.54
SMAD3-215ENST00000560424 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-215ENST00000560424 NOL9Q5SY16 702 aaKnown RBP11.68□□□□□ -0.54
SMAD3-215ENST00000560424 ZNF697Q5TEC3 545 aa11.68□□□□□ -0.54
SMAD3-215ENST00000560424 G2E3Q7L622 706 aa11.68□□□□□ -0.54
SMAD3-215ENST00000560424 FAM151AQ8WW52 585 aa11.68□□□□□ -0.54
SMAD3-215ENST00000560424 ZNF521Q96K83 1311 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 MOGSQ13724 837 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 GRIK5Q16478 980 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 MRIQ9BWK5 157 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 SLC45A1Q9Y2W3 748 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 ZHX2Q9Y6X8 837 aa11.67□□□□□ -0.54
SMAD3-215ENST00000560424 MROH5Q6ZUA9 1318 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms