RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CCL15Q16663 113 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 BRI3BPQ8WY22 251 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 WRNIP1Q96S55 665 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
SMAD3-214ENST00000560402 SNCAIPQ9Y6H5 919 aa16.86■□□□□ 0.29
SMAD3-214ENST00000560402 TAF1CQ15572 869 aaPredicted RBP16.85■□□□□ 0.29
SMAD3-214ENST00000560402 PRPF38BQ5VTL8 546 aaKnown RBP16.85■□□□□ 0.29
SMAD3-214ENST00000560402 ZGPATQ8N5A5 531 aaKnown RBP16.85■□□□□ 0.29
SMAD3-214ENST00000560402 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
SMAD3-214ENST00000560402 FAM151AQ8WW52 585 aa16.85■□□□□ 0.29
SMAD3-214ENST00000560402 SIL1Q9H173 461 aa16.85■□□□□ 0.29
SMAD3-214ENST00000560402 EFCC1Q9HA90 598 aa16.85■□□□□ 0.29
SMAD3-214ENST00000560402 ZFYVE28Q9HCC9 887 aa16.85■□□□□ 0.29
SMAD3-214ENST00000560402 DENND2AQ9ULE3 1009 aa16.85■□□□□ 0.29
SMAD3-214ENST00000560402 DAGLAQ9Y4D2 1042 aa16.85■□□□□ 0.29
SMAD3-214ENST00000560402 CETPP11597 493 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 PPIL2Q13356 520 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 ERICH6BQ5W0A0 696 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 ARHGAP45Q92619 1136 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 ZNF341Q9BYN7 854 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 COPRSQ9NQ92 184 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 PTPN22Q9Y2R2 807 aa16.84■□□□□ 0.29
SMAD3-214ENST00000560402 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
SMAD3-214ENST00000560402 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
SMAD3-214ENST00000560402 PDS5AQ29RF7 1337 aaKnown RBP16.84■□□□□ 0.29
SMAD3-214ENST00000560402 LDHBP07195 334 aaKnown RBP16.83■□□□□ 0.28
SMAD3-214ENST00000560402 PRDX5P30044 214 aa16.83■□□□□ 0.28
SMAD3-214ENST00000560402 SNAPC2Q13487 334 aa16.83■□□□□ 0.28
SMAD3-214ENST00000560402 GNAI3P08754 354 aa16.82■□□□□ 0.28
SMAD3-214ENST00000560402 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
SMAD3-214ENST00000560402 PPATQ06203 517 aa16.82■□□□□ 0.28
SMAD3-214ENST00000560402 ARMC5Q96C12 935 aa16.82■□□□□ 0.28
SMAD3-214ENST00000560402 MTX1Q13505 466 aa16.81■□□□□ 0.28
SMAD3-214ENST00000560402 FAM43AQ8N2R8 423 aa16.81■□□□□ 0.28
SMAD3-214ENST00000560402 MEIS3Q99687 375 aa16.81■□□□□ 0.28
SMAD3-214ENST00000560402 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 RFX7Q2KHR2 1363 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 GAKO14976 1311 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 IRF6O14896 467 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 PHKA1P46020 1223 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 DIXDC1Q155Q3 683 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 NOL9Q5SY16 702 aaKnown RBP16.8■□□□□ 0.28
SMAD3-214ENST00000560402 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
SMAD3-214ENST00000560402 ZNF112Q9UJU3 913 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
SMAD3-214ENST00000560402 AKAP2Q9Y2D5 859 aa16.8■□□□□ 0.28
SMAD3-214ENST00000560402 TLR2O60603 784 aa16.79■□□□□ 0.28
SMAD3-214ENST00000560402 CCDC102BQ68D86 513 aa16.79■□□□□ 0.28
SMAD3-214ENST00000560402 CENPFP49454 3210 aa16.79■□□□□ 0.28
SMAD3-214ENST00000560402 KIAA0100Q14667 2235 aaKnown RBP16.78■□□□□ 0.28
SMAD3-214ENST00000560402 ZSWIM8A7E2V4 1837 aa16.78■□□□□ 0.28
SMAD3-214ENST00000560402 BTBD19C9JJ37 291 aa16.78■□□□□ 0.28
SMAD3-214ENST00000560402 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
SMAD3-214ENST00000560402 MVPQ14764 893 aaKnown RBP16.78■□□□□ 0.28
SMAD3-214ENST00000560402 KIF22Q14807 665 aa16.78■□□□□ 0.28
SMAD3-214ENST00000560402 DZIP1Q86YF9 867 aaKnown RBP16.78■□□□□ 0.28
SMAD3-214ENST00000560402 IDI2Q9BXS1 227 aa16.78■□□□□ 0.28
SMAD3-214ENST00000560402 KCNH4Q9UQ05 1017 aa16.78■□□□□ 0.28
SMAD3-214ENST00000560402 MAST2Q6P0Q8 1798 aa16.78■□□□□ 0.28
SMAD3-214ENST00000560402 PTPRFP10586 1907 aa16.78■□□□□ 0.28
SMAD3-214ENST00000560402 ATRNL1Q5VV63 1379 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 SRGAP3O43295 1099 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 ENTPD3O75355 529 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 GNRH1P01148 92 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 INPP5BP32019 993 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 TCP10Q12799 353 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 NFIAQ12857 509 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 SPTY2D1Q68D10 685 aaPredicted RBP16.77■□□□□ 0.28
SMAD3-214ENST00000560402 ANKRD23Q86SG2 305 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 USP40Q9NVE5 1235 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.28
SMAD3-214ENST00000560402 A0A1B0GUL7 405 aa16.76■□□□□ 0.27
SMAD3-214ENST00000560402 ADORA1P30542 326 aa16.76■□□□□ 0.27
SMAD3-214ENST00000560402 PRMT2P55345 433 aa16.76■□□□□ 0.27
SMAD3-214ENST00000560402 MIGA2Q7L4E1 593 aa16.76■□□□□ 0.27
SMAD3-214ENST00000560402 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
SMAD3-214ENST00000560402 FAM163AQ96GL9 167 aaPredicted RBP16.76■□□□□ 0.27
SMAD3-214ENST00000560402 ZNF333Q96JL9 665 aa16.76■□□□□ 0.27
SMAD3-214ENST00000560402 LACTBP83111 547 aaPredicted RBP16.75■□□□□ 0.27
SMAD3-214ENST00000560402 SLC9C1Q4G0N8 1177 aa16.75■□□□□ 0.27
SMAD3-214ENST00000560402 PHIPQ8WWQ0 1821 aa16.75■□□□□ 0.27
SMAD3-214ENST00000560402 COL2A1P02458 1487 aaPredicted RBP16.74■□□□□ 0.27
SMAD3-214ENST00000560402 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 MGAMO43451 1857 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 POTEFA5A3E0 1075 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 GNAI2P04899 355 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 TRIM27P14373 513 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 RGS3P49796 1198 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 CAP1Q01518 475 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
SMAD3-214ENST00000560402 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 TMEM106CQ9BVX2 250 aa16.74■□□□□ 0.27
SMAD3-214ENST00000560402 ABCF2Q9UG63 623 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms