RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC00520-206ENST00000560336 CXXC1Q9P0U4 656 aaPredicted RBP10.16□□□□□ -0.78
LINC00520-206ENST00000560336 SLAIN2Q9P270 581 aa10.16□□□□□ -0.78
LINC00520-206ENST00000560336 COL18A1P39060 1754 aa10.16□□□□□ -0.78
LINC00520-206ENST00000560336 KIF24Q5T7B8 1368 aa10.15□□□□□ -0.78
LINC00520-206ENST00000560336 NPHP3Q7Z494 1330 aa10.15□□□□□ -0.78
LINC00520-206ENST00000560336 MED1Q15648 1581 aaPredicted RBP10.15□□□□□ -0.78
LINC00520-206ENST00000560336 RNF225M0QZC1 329 aaPredicted RBP10.15□□□□□ -0.78
LINC00520-206ENST00000560336 PRKAR2BP31323 418 aa10.15□□□□□ -0.78
LINC00520-206ENST00000560336 GSK3AP49840 483 aa10.15□□□□□ -0.78
LINC00520-206ENST00000560336 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
LINC00520-206ENST00000560336 HSP90AB2PQ58FF8 381 aa10.15□□□□□ -0.78
LINC00520-206ENST00000560336 RAB44Q7Z6P3 723 aaPredicted RBP10.15□□□□□ -0.78
LINC00520-206ENST00000560336 DMGDHQ9UI17 866 aaKnown RBP10.15□□□□□ -0.78
LINC00520-206ENST00000560336 LRFN2Q9ULH4 789 aa10.15□□□□□ -0.78
LINC00520-206ENST00000560336 PXDNQ92626 1479 aa10.15□□□□□ -0.78
LINC00520-206ENST00000560336 RTL1A6NKG5 1358 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 CACNA1FO60840 1977 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 PHLPP1O60346 1717 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 AMPD1P23109 780 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 IRS1P35568 1242 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 TMPOP42166 694 aaKnown RBP10.14□□□□□ -0.79
LINC00520-206ENST00000560336 IRX6P78412 446 aaPredicted RBP10.14□□□□□ -0.79
LINC00520-206ENST00000560336 SLFN5Q08AF3 891 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 C11orf91Q3C1V1 193 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 CAPN12Q6ZSI9 719 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 RCAN3Q9UKA8 241 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 TNS3Q68CZ2 1445 aa10.14□□□□□ -0.79
LINC00520-206ENST00000560336 CAMTA1Q9Y6Y1 1673 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 E9PSI1 815 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 HOXC9P31274 260 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 RIPK4P57078 832 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 SNRPNP63162 240 aaKnown RBP10.13□□□□□ -0.79
LINC00520-206ENST00000560336 CCDC27Q2M243 656 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 COX20Q5RI15 118 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 WDR63Q8IWG1 891 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 DDX17Q92841 729 aaKnown RBP10.13□□□□□ -0.79
LINC00520-206ENST00000560336 BTBD6Q96KE9 485 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 RRAGCQ9HB90 399 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 ARHGEF10O15013 1369 aa10.13□□□□□ -0.79
LINC00520-206ENST00000560336 LTBP4Q8N2S1 1624 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 IDH3AP50213 366 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 RASSF7Q02833 373 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 DUSP27Q5VZP5 1158 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 SULT6B1Q6IMI4 303 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 PODNQ7Z5L7 613 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 BEND7Q8N7W2 519 aaPredicted RBP10.12□□□□□ -0.79
LINC00520-206ENST00000560336 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
LINC00520-206ENST00000560336 SAP130Q9H0E3 1048 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 LMO7Q8WWI1 1683 aa10.12□□□□□ -0.79
LINC00520-206ENST00000560336 USP19O94966 1318 aa10.11□□□□□ -0.79
LINC00520-206ENST00000560336 MICAL2O94851 1124 aa10.11□□□□□ -0.79
LINC00520-206ENST00000560336 NFE2L2Q16236 605 aa10.11□□□□□ -0.79
LINC00520-206ENST00000560336 BRINP3Q76B58 766 aa10.11□□□□□ -0.79
LINC00520-206ENST00000560336 IFT43Q96FT9 208 aa10.11□□□□□ -0.79
LINC00520-206ENST00000560336 SIN3BO75182 1162 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 GCP02774 474 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 ATP2B4P23634 1241 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 INPP5BP32019 993 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 LMOD3Q0VAK6 560 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
LINC00520-206ENST00000560336 TRMT2AQ8IZ69 625 aaKnown RBP10.1□□□□□ -0.79
LINC00520-206ENST00000560336 IP6K1Q92551 441 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 BHMTQ93088 406 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 COL26A1Q96A83 441 aa10.1□□□□□ -0.79
LINC00520-206ENST00000560336 PARP4Q9UKK3 1724 aaKnown RBP10.1□□□□□ -0.79
LINC00520-206ENST00000560336 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 ABCC6O95255 1503 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 PHF20L1A8MW92 1017 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 HOXB4P17483 251 aaPredicted RBP10.09□□□□□ -0.79
LINC00520-206ENST00000560336 GRNP28799 593 aaKnown RBP10.09□□□□□ -0.79
LINC00520-206ENST00000560336 C16orf46Q6P387 395 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 CHSY3Q70JA7 882 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 PHACTR3Q96KR7 559 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 ARID3AQ99856 593 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
LINC00520-206ENST00000560336 SPATA31A3Q5VYP0 1347 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 IGSF1Q8N6C5 1336 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 ELOA3CA0A087WX78 387 aaPredicted RBP10.08□□□□□ -0.8
LINC00520-206ENST00000560336 ELOA3DA6NLF2 546 aaPredicted RBP10.08□□□□□ -0.8
LINC00520-206ENST00000560336 GDF11O95390 407 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 ARSDP51689 593 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 RRP1P56182 461 aaKnown RBP10.08□□□□□ -0.8
LINC00520-206ENST00000560336 CALD1Q05682 793 aaKnown RBP10.08□□□□□ -0.8
LINC00520-206ENST00000560336 ELOA3BQ3SY89 546 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 ERICH6BQ5W0A0 696 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 TMEM151AQ8N4L1 468 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 ELOA3Q8NG57 546 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 GSX2Q9BZM3 304 aa10.08□□□□□ -0.8
LINC00520-206ENST00000560336 IL16Q14005 1332 aa10.07□□□□□ -0.8
LINC00520-206ENST00000560336 RNF123Q5XPI4 1314 aa10.07□□□□□ -0.8
LINC00520-206ENST00000560336 LRRC37A3O60309 1634 aa10.07□□□□□ -0.8
LINC00520-206ENST00000560336 AHDC1Q5TGY3 1603 aaPredicted RBP10.07□□□□□ -0.8
LINC00520-206ENST00000560336 SIPA1L3O60292 1781 aaPredicted RBP10.07□□□□□ -0.8
LINC00520-206ENST00000560336 TMEM88BA6NKF7 163 aa10.07□□□□□ -0.8
LINC00520-206ENST00000560336 OPLAHO14841 1288 aa10.07□□□□□ -0.8
LINC00520-206ENST00000560336 PTCD1O75127 700 aaKnown RBP10.07□□□□□ -0.8
LINC00520-206ENST00000560336 EPB42P16452 691 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms