RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 RHPN1Q8TCX5 695 aa16.24■□□□□ 0.19
SMAD3-213ENST00000560175 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
SMAD3-213ENST00000560175 CSRNP1Q96S65 589 aa16.24■□□□□ 0.19
SMAD3-213ENST00000560175 TMEM39BQ9GZU3 492 aa16.24■□□□□ 0.19
SMAD3-213ENST00000560175 ANGEL1Q9UNK9 670 aaKnown RBP16.24■□□□□ 0.19
SMAD3-213ENST00000560175 RPAP1Q9BWH6 1393 aaPredicted RBP16.24■□□□□ 0.19
SMAD3-213ENST00000560175 MYO5AQ9Y4I1 1855 aaKnown RBP16.23■□□□□ 0.19
SMAD3-213ENST00000560175 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 RAB11FIP3O75154 756 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 MECOMQ03112 1051 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 FAM151AQ8WW52 585 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
SMAD3-213ENST00000560175 IDI2Q9BXS1 227 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 ABCF2Q9UG63 623 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 FZD1Q9UP38 647 aa16.23■□□□□ 0.19
SMAD3-213ENST00000560175 TM4SF4P48230 202 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 CACNB3P54284 484 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 TTLL12Q14166 644 aaPredicted RBP16.22■□□□□ 0.19
SMAD3-213ENST00000560175 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 KIF1BPQ96EK5 621 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 CCDC8Q9H0W5 538 aaPredicted RBP16.22■□□□□ 0.19
SMAD3-213ENST00000560175 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
SMAD3-213ENST00000560175 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 FAM198AQ9UFP1 575 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 RFX7Q2KHR2 1363 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 OTOFQ9HC10 1997 aa16.22■□□□□ 0.19
SMAD3-213ENST00000560175 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
SMAD3-213ENST00000560175 MAP4K4O95819 1239 aaPredicted RBP16.21■□□□□ 0.19
SMAD3-213ENST00000560175 CYP2E1P05181 493 aaPredicted RBP16.21■□□□□ 0.19
SMAD3-213ENST00000560175 IREB2P48200 963 aaKnown RBP16.21■□□□□ 0.19
SMAD3-213ENST00000560175 PRKG1Q13976 671 aa16.21■□□□□ 0.19
SMAD3-213ENST00000560175 TTC39AQ5SRH9 613 aa16.21■□□□□ 0.19
SMAD3-213ENST00000560175 SPRYD7Q5W111 196 aa16.21■□□□□ 0.19
SMAD3-213ENST00000560175 BEGAINQ9BUH8 593 aa16.21■□□□□ 0.19
SMAD3-213ENST00000560175 USP40Q9NVE5 1235 aa16.21■□□□□ 0.19
SMAD3-213ENST00000560175 SAGE1Q9NXZ1 904 aa16.21■□□□□ 0.19
SMAD3-213ENST00000560175 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 LDHCP07864 332 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 LBX1P52954 281 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
SMAD3-213ENST00000560175 RHBDL3P58872 404 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 MAP3K10Q02779 954 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 NFIAQ12857 509 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-213ENST00000560175 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
SMAD3-213ENST00000560175 ANKRD13AQ8IZ07 590 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.2■□□□□ 0.186e-6■□□□□ 9
SMAD3-213ENST00000560175 SLC10A4Q96EP9 437 aa16.2■□□□□ 0.18
SMAD3-213ENST00000560175 ENTPD3O75355 529 aa16.19■□□□□ 0.18
SMAD3-213ENST00000560175 WDHD1O75717 1129 aaPredicted RBP16.19■□□□□ 0.18
SMAD3-213ENST00000560175 ZBTB48P10074 688 aaPredicted RBP16.19■□□□□ 0.18
SMAD3-213ENST00000560175 GSTO1P78417 241 aa16.19■□□□□ 0.18
SMAD3-213ENST00000560175 HOOK2Q96ED9 719 aa16.19■□□□□ 0.18
SMAD3-213ENST00000560175 CLMNQ96JQ2 1002 aa16.19■□□□□ 0.18
SMAD3-213ENST00000560175 RNF186Q9NXI6 227 aa16.19■□□□□ 0.18
SMAD3-213ENST00000560175 AK9Q5TCS8 1911 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 DOCK2Q92608 1830 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 ZAP70P43403 619 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 INHBEP58166 350 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 PPP4CP60510 307 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 MAP3K9P80192 1104 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 AACSQ86V21 672 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 CLASRPQ8N2M8 674 aaKnown RBP16.18■□□□□ 0.18
SMAD3-213ENST00000560175 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMAD3-213ENST00000560175 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 SNRKQ9NRH2 765 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 ZNF112Q9UJU3 913 aa16.18■□□□□ 0.18
SMAD3-213ENST00000560175 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 BTDP43251 543 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 TMED8Q6PL24 325 aaPredicted RBP16.17■□□□□ 0.18
SMAD3-213ENST00000560175 ZFPM1Q8IX07 1006 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 CFHR5Q9BXR6 569 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 MAST2Q6P0Q8 1798 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 CASP8AP2Q9UKL3 1982 aa16.17■□□□□ 0.18
SMAD3-213ENST00000560175 TESPA1A2RU30 521 aaPredicted RBP16.16■□□□□ 0.18
SMAD3-213ENST00000560175 GJA5P36382 358 aa16.16■□□□□ 0.18
SMAD3-213ENST00000560175 SH3BP5LQ7L8J4 393 aa16.16■□□□□ 0.18
SMAD3-213ENST00000560175 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
SMAD3-213ENST00000560175 DDX4Q9NQI0 724 aaKnown RBP16.16■□□□□ 0.18
SMAD3-213ENST00000560175 PIH1D3Q9NQM4 214 aaKnown RBP16.16■□□□□ 0.18
SMAD3-213ENST00000560175 RAI14Q9P0K7 980 aa16.16■□□□□ 0.18
SMAD3-213ENST00000560175 CDK5RAP2Q96SN8 1893 aa16.16■□□□□ 0.18
SMAD3-213ENST00000560175 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
SMAD3-213ENST00000560175 RGS3P49796 1198 aa16.15■□□□□ 0.18
SMAD3-213ENST00000560175 TCP10Q12799 353 aa16.15■□□□□ 0.18
SMAD3-213ENST00000560175 VGLL4Q14135 290 aa16.15■□□□□ 0.18
SMAD3-213ENST00000560175 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
SMAD3-213ENST00000560175 DCAF15Q66K64 600 aa16.15■□□□□ 0.18
SMAD3-213ENST00000560175 PCDHB15Q9Y5E8 787 aa16.15■□□□□ 0.18
SMAD3-213ENST00000560175 COL2A1P02458 1487 aaPredicted RBP16.15■□□□□ 0.18
SMAD3-213ENST00000560175 FOCADQ5VW36 1801 aa16.15■□□□□ 0.18
SMAD3-213ENST00000560175 TRPA1O75762 1119 aa16.14■□□□□ 0.17
SMAD3-213ENST00000560175 SREBF2Q12772 1141 aa16.14■□□□□ 0.17
SMAD3-213ENST00000560175 IFFO2Q5TF58 517 aa16.14■□□□□ 0.17
SMAD3-213ENST00000560175 MS4A4AQ96JQ5 239 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 467.5 ms