RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 CCDC102BQ68D86 513 aa15.54■□□□□ 0.08
SNX1-209ENST00000559961 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.54■□□□□ 0.08
SNX1-209ENST00000559961 FTSJ3Q8IY81 847 aaKnown RBP15.54■□□□□ 0.08
SNX1-209ENST00000559961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNX1-209ENST00000559961 SALL1Q9NSC2 1324 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
SNX1-209ENST00000559961 PHKA1P46020 1223 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 TIMM10P62072 90 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 TCP10Q12799 353 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 CRHR2Q13324 411 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 OS9Q13438 667 aaPredicted RBP15.53■□□□□ 0.08
SNX1-209ENST00000559961 TAF1CQ15572 869 aaPredicted RBP15.53■□□□□ 0.08
SNX1-209ENST00000559961 ZSCAN29Q8IWY8 852 aaPredicted RBP15.53■□□□□ 0.08
SNX1-209ENST00000559961 CLUAP1Q96AJ1 413 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 EFCC1Q9HA90 598 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 DAGLAQ9Y4D2 1042 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 SSC5DA1L4H1 1573 aa15.53■□□□□ 0.08
SNX1-209ENST00000559961 PRDX5P30044 214 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 GSTO1P78417 241 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 TFCP2Q12800 502 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 DIXDC1Q155Q3 683 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 CDC42EP5Q6NZY7 148 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 ERICH6Q7L0X2 663 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 MIGA2Q7L4E1 593 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 R3HDMLQ9H3Y0 253 aa15.52■□□□□ 0.08
SNX1-209ENST00000559961 A0A1B0GUL7 405 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 SPDYE5A6NIY4 337 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 BCAR3O75815 825 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 LDHCP07864 332 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 TRIM27P14373 513 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 GJA5P36382 358 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 PPATQ06203 517 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 MTX1Q13505 466 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
SNX1-209ENST00000559961 CDAN1Q8IWY9 1227 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 ZKSCAN4Q969J2 545 aaPredicted RBP15.51■□□□□ 0.07
SNX1-209ENST00000559961 XAGE2Q96GT9 111 aa15.51■□□□□ 0.07
SNX1-209ENST00000559961 NOL10Q9BSC4 688 aaKnown RBP15.51■□□□□ 0.07
SNX1-209ENST00000559961 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
SNX1-209ENST00000559961 PPIL2Q13356 520 aa15.5■□□□□ 0.07
SNX1-209ENST00000559961 OTOP1Q7RTM1 612 aa15.5■□□□□ 0.07
SNX1-209ENST00000559961 NBPF11Q86T75 865 aa15.5■□□□□ 0.07
SNX1-209ENST00000559961 CD99L2Q8TCZ2 262 aa15.5■□□□□ 0.07
SNX1-209ENST00000559961 BRI3BPQ8WY22 251 aa15.5■□□□□ 0.07
SNX1-209ENST00000559961 MS4A4AQ96JQ5 239 aa15.5■□□□□ 0.07
SNX1-209ENST00000559961 ZCCHC17Q9NP64 241 aaKnown RBP15.5■□□□□ 0.07
SNX1-209ENST00000559961 PICK1Q9NRD5 415 aa15.5■□□□□ 0.07
SNX1-209ENST00000559961 RPAP1Q9BWH6 1393 aaPredicted RBP15.49■□□□□ 0.07
SNX1-209ENST00000559961 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
SNX1-209ENST00000559961 PDS5AQ29RF7 1337 aaKnown RBP15.49■□□□□ 0.07
SNX1-209ENST00000559961 UQCRFS1P1P0C7P4 283 aa15.49■□□□□ 0.07
SNX1-209ENST00000559961 ADORA1P30542 326 aa15.49■□□□□ 0.07
SNX1-209ENST00000559961 PTPN18Q99952 460 aa15.49■□□□□ 0.07
SNX1-209ENST00000559961 ZBTB22O15209 634 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 ENTPD3O75355 529 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 RASGRF1Q13972 1273 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 CCDC158Q5M9N0 1113 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 TMEM106CQ9BVX2 250 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 RAI14Q9P0K7 980 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 SNCAIPQ9Y6H5 919 aa15.48■□□□□ 0.07
SNX1-209ENST00000559961 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
SNX1-209ENST00000559961 IRF6O14896 467 aa15.47■□□□□ 0.07
SNX1-209ENST00000559961 MAP4K4O95819 1239 aaPredicted RBP15.47■□□□□ 0.07
SNX1-209ENST00000559961 ITPRIPQ8IWB1 547 aa15.47■□□□□ 0.07
SNX1-209ENST00000559961 SPATA5Q8NB90 893 aa15.47■□□□□ 0.07
SNX1-209ENST00000559961 LRP2BPQ9P2M1 347 aa15.47■□□□□ 0.07
SNX1-209ENST00000559961 PTPN22Q9Y2R2 807 aa15.47■□□□□ 0.07
SNX1-209ENST00000559961 MS4A1P11836 297 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 BTDP43251 543 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 RGS3P49796 1198 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 NFIAQ12857 509 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 TTC39AQ5SRH9 613 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 MIER1Q8N108 512 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 FAM43AQ8N2R8 423 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 TMEM57Q8N5G2 664 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
SNX1-209ENST00000559961 FAM163AQ96GL9 167 aaPredicted RBP15.46■□□□□ 0.07
SNX1-209ENST00000559961 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
SNX1-209ENST00000559961 BTBD19C9JJ37 291 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 TLR2O60603 784 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 SURF6O75683 361 aaKnown RBP15.45■□□□□ 0.06
SNX1-209ENST00000559961 GNRH1P01148 92 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 HOXD10P28358 340 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 INPP5BP32019 993 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 PICALMQ13492 652 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 FASTKD5Q7L8L6 764 aaKnown RBP15.45■□□□□ 0.06
SNX1-209ENST00000559961 FAM198AQ9UFP1 575 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 ZNF112Q9UJU3 913 aa15.45■□□□□ 0.06
SNX1-209ENST00000559961 MROH7-TTC4A0A0A0MT08 1334 aa15.44■□□□□ 0.06
SNX1-209ENST00000559961 CXCL11O14625 94 aa15.44■□□□□ 0.06
SNX1-209ENST00000559961 BAG3O95817 575 aa15.44■□□□□ 0.06
SNX1-209ENST00000559961 ATP8B2P98198 1209 aa15.44■□□□□ 0.06
SNX1-209ENST00000559961 MECOMQ03112 1051 aa15.44■□□□□ 0.06
SNX1-209ENST00000559961 SLC9C1Q4G0N8 1177 aa15.44■□□□□ 0.06
SNX1-209ENST00000559961 NOL9Q5SY16 702 aaKnown RBP15.44■□□□□ 0.06
SNX1-209ENST00000559961 ANKRD23Q86SG2 305 aa15.44■□□□□ 0.06
SNX1-209ENST00000559961 GAKO14976 1311 aa15.43■□□□□ 0.06
SNX1-209ENST00000559961 ARAP2Q8WZ64 1704 aa15.43■□□□□ 0.06
SNX1-209ENST00000559961 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms