RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 TEPSINQ96N21 525 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 TSKSQ9UJT2 592 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
RABGGTA-211ENST00000559850 MAP2K2P36507 400 aa18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 TNNI2P48788 182 aa18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 TNFAIP1Q13829 316 aa18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 CCDC102AQ96A19 550 aa18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 USP40Q9NVE5 1235 aa18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 TMOD2Q9NZR1 351 aa18.21■□□□□ 0.51
RABGGTA-211ENST00000559850 ZAP70P43403 619 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 MAP2K1Q02750 393 aaPredicted RBP18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 TCP10Q12799 353 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 NFIAQ12857 509 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 NOGQ13253 232 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 SUPT20HL1Q3ZLR7 823 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 HSP90AB4PQ58FF6 505 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 CLMNQ96JQ2 1002 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 RAI14Q9P0K7 980 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 GAKO14976 1311 aa18.2■□□□□ 0.5
RABGGTA-211ENST00000559850 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
RABGGTA-211ENST00000559850 USP2O75604 605 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-211ENST00000559850 BTDP43251 543 aa18.19■□□□□ 0.5
RABGGTA-211ENST00000559850 COL13A1Q5TAT6 717 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-211ENST00000559850 PIH1D3Q9NQM4 214 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-211ENST00000559850 MROH7-TTC4A0A0A0MT08 1334 aa18.19■□□□□ 0.5
RABGGTA-211ENST00000559850 CDK5RAP2Q96SN8 1893 aa18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 SMARCA5O60264 1052 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 CYP2E1P05181 493 aaPredicted RBP18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 LDLRAD1Q5T700 205 aa18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 ZFPM1Q8IX07 1006 aa18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 NSUN4Q96CB9 384 aaKnown RBP18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 KIF1BPQ96EK5 621 aa18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 LRP2BPQ9P2M1 347 aa18.18■□□□□ 0.5
RABGGTA-211ENST00000559850 HSPA8P11142 646 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-211ENST00000559850 LBX1P52954 281 aa18.17■□□□□ 0.5
RABGGTA-211ENST00000559850 FAM198AQ9UFP1 575 aa18.17■□□□□ 0.5
RABGGTA-211ENST00000559850 PCDHB15Q9Y5E8 787 aa18.17■□□□□ 0.5
RABGGTA-211ENST00000559850 RAB11FIP3O75154 756 aa18.16■□□□□ 0.5
RABGGTA-211ENST00000559850 MAP3K11Q16584 847 aa18.16■□□□□ 0.5
RABGGTA-211ENST00000559850 FAM83AQ86UY5 434 aa18.16■□□□□ 0.5
RABGGTA-211ENST00000559850 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
RABGGTA-211ENST00000559850 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-211ENST00000559850 BEGAINQ9BUH8 593 aa18.16■□□□□ 0.5
RABGGTA-211ENST00000559850 ANTXR1Q9H6X2 564 aa18.16■□□□□ 0.5
RABGGTA-211ENST00000559850 IFIT2P09913 472 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 RGS3P49796 1198 aa18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 PICALMQ13492 652 aa18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 FKBP1CQ5VVH2 108 aa18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 SLF2Q8IX21 1173 aa18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 FAM151AQ8WW52 585 aa18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 CSRNP1Q96S65 589 aa18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 RFX7Q2KHR2 1363 aa18.15■□□□□ 0.5
RABGGTA-211ENST00000559850 GPR75-ASB3A0A0A6YYF3 556 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 SLURP2P0DP57 97 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 GSTO1P78417 241 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 MIGA2Q7L4E1 593 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 ADGRA1Q86SQ6 560 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 SLC10A4Q96EP9 437 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 ELP3Q9H9T3 547 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 DDX4Q9NQI0 724 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 LAMB1P07942 1786 aa18.14■□□□□ 0.49
RABGGTA-211ENST00000559850 WDHD1O75717 1129 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-211ENST00000559850 RHBDL3P58872 404 aa18.13■□□□□ 0.49
RABGGTA-211ENST00000559850 SPRYD7Q5W111 196 aa18.13■□□□□ 0.49
RABGGTA-211ENST00000559850 NAA16Q6N069 864 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-211ENST00000559850 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
RABGGTA-211ENST00000559850 WNK4Q96J92 1243 aa18.13■□□□□ 0.49
RABGGTA-211ENST00000559850 FOCADQ5VW36 1801 aa18.13■□□□□ 0.49
RABGGTA-211ENST00000559850 CASP8AP2Q9UKL3 1982 aa18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 IDH1O75874 414 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 LDHCP07864 332 aa18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 GJA5P36382 358 aa18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 VGLL4Q14135 290 aa18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 SH3BP5LQ7L8J4 393 aa18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 SH3RF3Q8TEJ3 882 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 LRRCC1Q9C099 1032 aa18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 AATFQ9NY61 560 aaKnown RBP eCLIP18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 RPAP1Q9BWH6 1393 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-211ENST00000559850 MAP3K9P80192 1104 aa18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 ZKSCAN4Q969J2 545 aaPredicted RBP18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 EDC3Q96F86 508 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 DNAJC2Q99543 621 aaKnown RBP18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 IDI2Q9BXS1 227 aa18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 DCTPP1Q9H773 170 aa18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 RNF186Q9NXI6 227 aa18.11■□□□□ 0.49
RABGGTA-211ENST00000559850 DDTLA6NHG4 134 aaPredicted RBP18.1■□□□□ 0.49
RABGGTA-211ENST00000559850 TRPA1O75762 1119 aa18.1■□□□□ 0.49
RABGGTA-211ENST00000559850 DYNLL1P63167 89 aaKnown RBP18.1■□□□□ 0.49
RABGGTA-211ENST00000559850 ZSCAN29Q8IWY8 852 aaPredicted RBP18.1■□□□□ 0.49
RABGGTA-211ENST00000559850 MAGEB6Q8N7X4 407 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms