RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 VEGFBP49765 207 aa16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
CHRNB4-204ENST00000559849 GPR75-ASB3A0A0A6YYF3 556 aa16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 ECE1P42892 770 aa16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 TTF1Q15361 905 aaPredicted RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 NBPF12Q5TAG4 269 aaPredicted RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 NDUFB9Q9Y6M9 179 aa16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 PPP1R12BO60237 982 aaPredicted RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 BTDP43251 543 aa16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 TMEM39BQ9GZU3 492 aa16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 ZBTB47Q9UFB7 747 aaPredicted RBP16.65■□□□□ 0.26
CHRNB4-204ENST00000559849 IDH1O75874 414 aaKnown RBP16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 CYP4F22Q6NT55 531 aa16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 ARMC9Q7Z3E5 817 aa16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 CAPNS2Q96L46 248 aa16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 TEPSINQ96N21 525 aa16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 WDR33Q9C0J8 1336 aaKnown RBP16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
CHRNB4-204ENST00000559849 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 MAP3K12Q12852 859 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 PRKG1Q13976 671 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 TMED8Q6PL24 325 aaPredicted RBP16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 BOLA2Q9H3K6 86 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 UBE2Q2LH0YL09 131 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 MAP4K4O95819 1239 aaPredicted RBP16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 MOB2Q70IA6 237 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 NOL10Q9BSC4 688 aaKnown RBP16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
CHRNB4-204ENST00000559849 BAG3O95817 575 aa16.62■□□□□ 0.25
CHRNB4-204ENST00000559849 ZNF157P51786 506 aaPredicted RBP16.62■□□□□ 0.25
CHRNB4-204ENST00000559849 NFIAQ12857 509 aa16.62■□□□□ 0.25
CHRNB4-204ENST00000559849 GRM1Q13255 1194 aa16.62■□□□□ 0.25
CHRNB4-204ENST00000559849 CCDC102AQ96A19 550 aa16.62■□□□□ 0.25
CHRNB4-204ENST00000559849 ANGEL1Q9UNK9 670 aaKnown RBP16.62■□□□□ 0.25
CHRNB4-204ENST00000559849 AK9Q5TCS8 1911 aa16.62■□□□□ 0.25
CHRNB4-204ENST00000559849 GOLIM4O00461 696 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 TCP10Q12799 353 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 HOOK2Q96ED9 719 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 HAUS7Q99871 368 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 RHBDL3P58872 404 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 PAG1Q9NWQ8 432 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 FAM198AQ9UFP1 575 aa16.61■□□□□ 0.25
CHRNB4-204ENST00000559849 ENTPD3O75355 529 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 IGHDP01880 384 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 CYP7A1P22680 504 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 MAP2K2P36507 400 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 PPP4CP60510 307 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 CDAN1Q8IWY9 1227 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 SMC5Q8IY18 1101 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 SSC5DA1L4H1 1573 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 RPAP1Q9BWH6 1393 aaPredicted RBP16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 UNCXA6NJT0 531 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 USP2O75604 605 aaPredicted RBP16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 WDHD1O75717 1129 aaPredicted RBP16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 PLCG2P16885 1265 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 IREB2P48200 963 aaKnown RBP16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 RGS3P49796 1198 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 MAGEB6Q8N7X4 407 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 FZD1Q9UP38 647 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
CHRNB4-204ENST00000559849 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
CHRNB4-204ENST00000559849 TTC41PQ6P2S7 1318 aa16.59■□□□□ 0.25
CHRNB4-204ENST00000559849 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
CHRNB4-204ENST00000559849 NOGQ13253 232 aa16.59■□□□□ 0.25
CHRNB4-204ENST00000559849 SLC9C2Q5TAH2 1124 aa16.59■□□□□ 0.25
CHRNB4-204ENST00000559849 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
CHRNB4-204ENST00000559849 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.25
CHRNB4-204ENST00000559849 ERC2O15083 957 aa16.58■□□□□ 0.24
CHRNB4-204ENST00000559849 PICALMQ13492 652 aa16.58■□□□□ 0.24
CHRNB4-204ENST00000559849 CERS3Q8IU89 383 aa16.58■□□□□ 0.24
CHRNB4-204ENST00000559849 ZFPM1Q8IX07 1006 aa16.58■□□□□ 0.24
CHRNB4-204ENST00000559849 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
CHRNB4-204ENST00000559849 FAM155AB1AL88 458 aaPredicted RBP16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 AOC2O75106 756 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 DCAF15Q66K64 600 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 SH3RF3Q8TEJ3 882 aaPredicted RBP16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 DDX4Q9NQI0 724 aaKnown RBP16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 RFX7Q2KHR2 1363 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 SLC10A3P09131 477 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 MX1P20591 662 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 MAP2K1Q02750 393 aaPredicted RBP16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 B4GALNT3Q6L9W6 998 aa16.57■□□□□ 0.24
CHRNB4-204ENST00000559849 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms