RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SARM1Q6SZW1 724 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 SYNE3Q6ZMZ3 975 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 NFXL1Q6ZNB6 911 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 BRAPQ7Z569 592 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 KCNG4Q8TDN1 519 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 C16orf45Q96MC5 204 aaPredicted RBP11.68□□□□□ -0.54
LRRC28-216ENST00000559819 ANKRD36CQ5JPF3 1778 aa11.68□□□□□ -0.54
LRRC28-216ENST00000559819 ERVV-1B6SEH8 477 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 RANBP6O60518 1105 aaKnown RBP11.67□□□□□ -0.54
LRRC28-216ENST00000559819 YEATS4O95619 227 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 UQCRFS1P1P0C7P4 283 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 AXDND1Q5T1B0 1012 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-216ENST00000559819 KRT40Q6A162 431 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 ISM2Q6H9L7 571 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 CEP57L1Q8IYX8 460 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 IFNL3Q8IZI9 196 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 NUP98P52948 1817 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 FILIP1Q7Z7B0 1213 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 IGDCC4Q8TDY8 1250 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 LY9Q9HBG7 655 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 FAM217BQ9NTX9 383 aaPredicted RBP11.67□□□□□ -0.54
LRRC28-216ENST00000559819 MROH5Q6ZUA9 1318 aa11.67□□□□□ -0.54
LRRC28-216ENST00000559819 MYH3P11055 1940 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 ZNF202O95125 648 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 SLC5A1P13866 664 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 PFKFB1P16118 471 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 GTF2F1P35269 517 aaKnown RBP eCLIP11.66□□□□□ -0.54
LRRC28-216ENST00000559819 BCAMP50895 628 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 INTS5Q6P9B9 1019 aaKnown RBP11.66□□□□□ -0.54
LRRC28-216ENST00000559819 VPS37DQ86XT2 251 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 MRFAP1L1Q96HT8 127 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 KIAA1468Q9P260 1216 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 ZBTB43O43298 467 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
LRRC28-216ENST00000559819 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 ZKSCAN3Q9BRR0 538 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 NAPBQ9H115 298 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 LRP5O75197 1615 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
LRRC28-216ENST00000559819 NTRK3Q16288 839 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 LRRC8AQ8IWT6 810 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 MPHOSPH8Q99549 860 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
LRRC28-216ENST00000559819 IQSEC3Q9UPP2 1182 aaPredicted RBP11.66□□□□□ -0.54
LRRC28-216ENST00000559819 USP27XA6NNY8 438 aa11.65□□□□□ -0.54
LRRC28-216ENST00000559819 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
LRRC28-216ENST00000559819 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
LRRC28-216ENST00000559819 GNL2Q13823 731 aaKnown RBP11.65□□□□□ -0.54
LRRC28-216ENST00000559819 MIGA1Q8NAN2 632 aa11.65□□□□□ -0.54
LRRC28-216ENST00000559819 CLIC6Q96NY7 704 aa11.65□□□□□ -0.54
LRRC28-216ENST00000559819 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
LRRC28-216ENST00000559819 GSG1L2A8MUP6 293 aa11.65□□□□□ -0.55
LRRC28-216ENST00000559819 SLC3A2P08195 630 aaKnown RBP11.65□□□□□ -0.55
LRRC28-216ENST00000559819 GUCY1A2P33402 732 aa11.65□□□□□ -0.55
LRRC28-216ENST00000559819 ATP6V1AP38606 617 aa11.65□□□□□ -0.55
LRRC28-216ENST00000559819 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.55
LRRC28-216ENST00000559819 MAP3K12Q12852 859 aa11.65□□□□□ -0.55
LRRC28-216ENST00000559819 CHAF1AQ13111 956 aaPredicted RBP11.65□□□□□ -0.55
LRRC28-216ENST00000559819 SLC39A14Q15043 492 aa11.65□□□□□ -0.55
LRRC28-216ENST00000559819 TMEM87BQ96K49 555 aa11.65□□□□□ -0.55
LRRC28-216ENST00000559819 UTP14AQ9BVJ6 771 aaKnown RBP11.65□□□□□ -0.55
LRRC28-216ENST00000559819 TOMM22Q9NS69 142 aa11.65□□□□□ -0.55
LRRC28-216ENST00000559819 CCDC69A6NI79 296 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 WTIPA6NIX2 430 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-216ENST00000559819 CDKL5O76039 1030 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 TNNT1P13805 278 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 IARSP41252 1262 aaKnown RBP11.64□□□□□ -0.55
LRRC28-216ENST00000559819 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-216ENST00000559819 SHC4Q6S5L8 630 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 CMTR1Q8N1G2 835 aaKnown RBP11.64□□□□□ -0.55
LRRC28-216ENST00000559819 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-216ENST00000559819 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 SMIM22K7EJ46 135 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 CMA1P23946 247 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 ITPK1Q13572 414 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 PTPAQ15257 358 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 ALX1Q15699 326 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 NBPF11Q86T75 865 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 NAT10Q9H0A0 1025 aaKnown RBP11.64□□□□□ -0.55
LRRC28-216ENST00000559819 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 COL4A1P02462 1669 aa11.64□□□□□ -0.55
LRRC28-216ENST00000559819 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 CAMTA2O94983 1202 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 TDO2P48775 406 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 ZRSR1Q15695 479 aaKnown RBP11.63□□□□□ -0.55
LRRC28-216ENST00000559819 GLIPR1L2Q4G1C9 344 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 CPLX2Q6PUV4 134 aaKnown RBP11.63□□□□□ -0.55
LRRC28-216ENST00000559819 MAP3K14Q99558 947 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.63□□□□□ -0.55
LRRC28-216ENST00000559819 SLC12A7Q9Y666 1083 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 SMC2O95347 1197 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 NLRP12P59046 1061 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 CCZ1BP86790 482 aa11.63□□□□□ -0.55
LRRC28-216ENST00000559819 CCZ1P86791 482 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-216ENST00000559819 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms