RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 PPATQ06203 517 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 UBE2Q1Q7Z7E8 422 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 ANKRD23Q86SG2 305 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 ZNF341Q9BYN7 854 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 UNC93B1Q9H1C4 597 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 PRO3102Q9H379 93 aa13.66□□□□□ -0.22
TRAF3-207ENST00000559734 PARK7Q99497 189 aaKnown RBP13.65□□□□□ -0.22
TRAF3-207ENST00000559734 PUS3Q9BZE2 481 aaKnown RBP13.65□□□□□ -0.22
TRAF3-207ENST00000559734 ADGRA2Q96PE1 1338 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 SZT2Q5T011 3432 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 GRM8O00222 908 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 FAM83AQ86UY5 434 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 TBC1D22AQ8WUA7 517 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 C9orf78Q9NZ63 289 aaPredicted RBP13.64□□□□□ -0.23
TRAF3-207ENST00000559734 STAP2Q9UGK3 403 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 GABRQQ9UN88 632 aa13.64□□□□□ -0.23
TRAF3-207ENST00000559734 TFRCP02786 760 aaKnown RBP13.63□□□□□ -0.23
TRAF3-207ENST00000559734 CYP2C8P10632 490 aa13.63□□□□□ -0.23
TRAF3-207ENST00000559734 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
TRAF3-207ENST00000559734 CAVIN4Q5BKX8 364 aa13.63□□□□□ -0.23
TRAF3-207ENST00000559734 ZDHHC15Q96MV8 337 aa13.63□□□□□ -0.23
TRAF3-207ENST00000559734 A0A1W2PPC1 479 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 ADCY3O60266 1144 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 SGPL1O95470 568 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 INHAP05111 366 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 ELNP15502 786 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 TCP10Q12799 353 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 APOBEC3HQ6NTF7 200 aaKnown RBP13.62□□□□□ -0.23
TRAF3-207ENST00000559734 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 PRKRIP1Q9H875 184 aaPredicted RBP13.62□□□□□ -0.23
TRAF3-207ENST00000559734 MAST3O60307 1309 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 MROH5Q6ZUA9 1318 aa13.62□□□□□ -0.23
TRAF3-207ENST00000559734 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-207ENST00000559734 METTL24Q5JXM2 366 aa13.61□□□□□ -0.23
TRAF3-207ENST00000559734 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
TRAF3-207ENST00000559734 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
TRAF3-207ENST00000559734 KCNH4Q9UQ05 1017 aa13.61□□□□□ -0.23
TRAF3-207ENST00000559734 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
TRAF3-207ENST00000559734 TNPO2O14787 897 aaKnown RBP13.6□□□□□ -0.23
TRAF3-207ENST00000559734 BCRP11274 1271 aa13.6□□□□□ -0.23
TRAF3-207ENST00000559734 FLT3LGP49771 235 aa13.6□□□□□ -0.23
TRAF3-207ENST00000559734 BCAMP50895 628 aa13.6□□□□□ -0.23
TRAF3-207ENST00000559734 MOGSQ13724 837 aa13.6□□□□□ -0.23
TRAF3-207ENST00000559734 FKBP1CQ5VVH2 108 aa13.6□□□□□ -0.23
TRAF3-207ENST00000559734 C7orf61Q8IZ16 206 aa13.6□□□□□ -0.23
TRAF3-207ENST00000559734 SUCLG2Q96I99 432 aa13.6□□□□□ -0.23
TRAF3-207ENST00000559734 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
TRAF3-207ENST00000559734 VAMP4O75379 141 aa13.59□□□□□ -0.23
TRAF3-207ENST00000559734 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-207ENST00000559734 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-207ENST00000559734 LRRC24Q50LG9 513 aa13.59□□□□□ -0.23
TRAF3-207ENST00000559734 GADL1Q6ZQY3 521 aa13.59□□□□□ -0.23
TRAF3-207ENST00000559734 FAM151AQ8WW52 585 aa13.59□□□□□ -0.23
TRAF3-207ENST00000559734 PAWRQ96IZ0 340 aaKnown RBP13.59□□□□□ -0.23
TRAF3-207ENST00000559734 ZMYND8Q9ULU4 1186 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-207ENST00000559734 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
TRAF3-207ENST00000559734 CCDC27Q2M243 656 aa13.58□□□□□ -0.24
TRAF3-207ENST00000559734 GPAT2Q6NUI2 795 aa13.58□□□□□ -0.24
TRAF3-207ENST00000559734 Q7L0L9 218 aa13.58□□□□□ -0.24
TRAF3-207ENST00000559734 DEFB123Q8N688 67 aa13.58□□□□□ -0.24
TRAF3-207ENST00000559734 SMCR8Q8TEV9 937 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-207ENST00000559734 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
TRAF3-207ENST00000559734 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-207ENST00000559734 NFIAQ12857 509 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 NOL9Q5SY16 702 aaKnown RBP13.57□□□□□ -0.24
TRAF3-207ENST00000559734 HHIPL2Q6UWX4 724 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 NECAB2Q7Z6G3 386 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 PICK1Q9NRD5 415 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 SUGT1Q9Y2Z0 365 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 ZHX2Q9Y6X8 837 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 IL16Q14005 1332 aa13.57□□□□□ -0.24
TRAF3-207ENST00000559734 CXCL11O14625 94 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 PDE8BO95263 885 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 IFIT1P09914 478 aaKnown RBP13.56□□□□□ -0.24
TRAF3-207ENST00000559734 SYN1P17600 705 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 DIXDC1Q155Q3 683 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 CDC42EP5Q6NZY7 148 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 FASTKD5Q7L8L6 764 aaKnown RBP13.56□□□□□ -0.24
TRAF3-207ENST00000559734 MRIQ9BWK5 157 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 SRCIN1Q9C0H9 1055 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 BICC1Q9H694 974 aaKnown RBP13.56□□□□□ -0.24
TRAF3-207ENST00000559734 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
TRAF3-207ENST00000559734 MGAMO43451 1857 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 ZBTB22O15209 634 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 NBPF7P0C2Y1 421 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-207ENST00000559734 SCYL3Q8IZE3 742 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 KLHDC4Q8TBB5 520 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 PXYLP1Q8TE99 480 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 COA7Q96BR5 231 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 KAZALD1Q96I82 304 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAF3-207ENST00000559734 PAK6Q9NQU5 681 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-207ENST00000559734 USP40Q9NVE5 1235 aa13.55□□□□□ -0.24
TRAF3-207ENST00000559734 RANBP2P49792 3224 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms