RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 LILRB5O75023 590 aa9.23□□□□□ -0.93
ZEB1-216ENST00000559496 PTCD1O75127 700 aaKnown RBP9.23□□□□□ -0.93
ZEB1-216ENST00000559496 BRD2P25440 801 aaKnown RBP9.23□□□□□ -0.93
ZEB1-216ENST00000559496 PRRT3Q5FWE3 981 aa9.23□□□□□ -0.93
ZEB1-216ENST00000559496 C16orf46Q6P387 395 aa9.23□□□□□ -0.93
ZEB1-216ENST00000559496 MORC1Q86VD1 984 aa9.23□□□□□ -0.93
ZEB1-216ENST00000559496 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
ZEB1-216ENST00000559496 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
ZEB1-216ENST00000559496 EDC4Q6P2E9 1401 aaKnown RBP9.23□□□□□ -0.93
ZEB1-216ENST00000559496 MON2Q7Z3U7 1717 aa9.23□□□□□ -0.93
ZEB1-216ENST00000559496 RGPD8O14715 1765 aaPredicted RBP9.22□□□□□ -0.93
ZEB1-216ENST00000559496 TMEM94Q12767 1356 aa9.22□□□□□ -0.93
ZEB1-216ENST00000559496 EGFRP00533 1210 aa9.22□□□□□ -0.93
ZEB1-216ENST00000559496 TARSP26639 723 aaKnown RBP9.22□□□□□ -0.93
ZEB1-216ENST00000559496 PPP2R1AP30153 589 aa9.22□□□□□ -0.93
ZEB1-216ENST00000559496 KIF20BQ96Q89 1820 aa9.21□□□□□ -0.93
ZEB1-216ENST00000559496 NCOA3Q9Y6Q9 1424 aa9.21□□□□□ -0.94
ZEB1-216ENST00000559496 ACEP12821 1306 aa9.21□□□□□ -0.94
ZEB1-216ENST00000559496 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
ZEB1-216ENST00000559496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.21□□□□□ -0.943e-6■■■■□ 22.7
ZEB1-216ENST00000559496 SAP130Q9H0E3 1048 aa9.21□□□□□ -0.94
ZEB1-216ENST00000559496 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
ZEB1-216ENST00000559496 ANKRD26Q9UPS8 1709 aa9.2□□□□□ -0.94
ZEB1-216ENST00000559496 ZNF335Q9H4Z2 1342 aaPredicted RBP9.2□□□□□ -0.94
ZEB1-216ENST00000559496 K7ELQ4 463 aaPredicted RBP9.2□□□□□ -0.94
ZEB1-216ENST00000559496 FYB1O15117 783 aa9.2□□□□□ -0.94
ZEB1-216ENST00000559496 SASH3O75995 380 aa9.2□□□□□ -0.94
ZEB1-216ENST00000559496 TRIM28Q13263 835 aaKnown RBP9.2□□□□□ -0.94
ZEB1-216ENST00000559496 DHX32Q7L7V1 743 aaKnown RBP9.2□□□□□ -0.94
ZEB1-216ENST00000559496 FAM9BQ8IZU0 186 aa9.2□□□□□ -0.94
ZEB1-216ENST00000559496 NGDNQ8NEJ9 315 aaKnown RBP9.2□□□□□ -0.94
ZEB1-216ENST00000559496 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
ZEB1-216ENST00000559496 GGNBP2Q9H3C7 697 aa9.2□□□□□ -0.94
ZEB1-216ENST00000559496 C19orf44Q9H6X5 657 aa9.2□□□□□ -0.94
ZEB1-216ENST00000559496 JPH1Q9HDC5 661 aaPredicted RBP9.2□□□□□ -0.94
ZEB1-216ENST00000559496 USP6P35125 1406 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
ZEB1-216ENST00000559496 RARAP10276 462 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 TNNT2P45379 298 aaPredicted RBP9.19□□□□□ -0.94
ZEB1-216ENST00000559496 PSAPL1Q6NUJ1 521 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 RGL4Q8IZJ4 473 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 CMTR1Q8N1G2 835 aaKnown RBP9.19□□□□□ -0.94
ZEB1-216ENST00000559496 NUDT8Q8WV74 236 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 USP20Q9Y2K6 914 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 NRKQ7Z2Y5 1582 aa9.19□□□□□ -0.94
ZEB1-216ENST00000559496 DCCP43146 1447 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 MSH6P52701 1360 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 XYLBO75191 536 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 ATF3P18847 181 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-216ENST00000559496 NAA30Q147X3 362 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-216ENST00000559496 TRAPPC3LQ5T215 181 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 CAPN12Q6ZSI9 719 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 ETFBKMTQ8IXQ9 262 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 TRPM4Q8TD43 1214 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 LRRC7Q96NW7 1537 aa9.18□□□□□ -0.94
ZEB1-216ENST00000559496 TTC21BQ7Z4L5 1316 aa9.17□□□□□ -0.94
ZEB1-216ENST00000559496 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
ZEB1-216ENST00000559496 RGS9O75916 674 aaPredicted RBP9.17□□□□□ -0.94
ZEB1-216ENST00000559496 FURINP09958 794 aa9.17□□□□□ -0.94
ZEB1-216ENST00000559496 FAM35AQ86V20 835 aa9.17□□□□□ -0.94
ZEB1-216ENST00000559496 NME9Q86XW9 330 aa9.17□□□□□ -0.94
ZEB1-216ENST00000559496 PNISRQ8TF01 805 aaKnown RBP9.17□□□□□ -0.94
ZEB1-216ENST00000559496 FRRS1LQ9P0K9 344 aa9.17□□□□□ -0.94
ZEB1-216ENST00000559496 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
ZEB1-216ENST00000559496 XIRP1Q702N8 1843 aaKnown RBP9.17□□□□□ -0.94
ZEB1-216ENST00000559496 TTC21AQ8NDW8 1320 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 C1orf167Q5SNV9 1468 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 TNFRSF10BO14763 440 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 APBA3O96018 575 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 AFF1P51825 1210 aaKnown RBP9.16□□□□□ -0.94
ZEB1-216ENST00000559496 ILDR2Q71H61 639 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 CCDC82Q8N4S0 544 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 FAM13BQ9NYF5 915 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 TLR7Q9NYK1 1049 aaKnown RBP9.16□□□□□ -0.94
ZEB1-216ENST00000559496 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 KCNMB2Q9Y691 235 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
ZEB1-216ENST00000559496 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
ZEB1-216ENST00000559496 CPB1P15086 417 aa9.15□□□□□ -0.94
ZEB1-216ENST00000559496 NRLP54845 237 aa9.15□□□□□ -0.94
ZEB1-216ENST00000559496 GPLD1P80108 840 aa9.15□□□□□ -0.94
ZEB1-216ENST00000559496 COG3Q96JB2 828 aa9.15□□□□□ -0.94
ZEB1-216ENST00000559496 MST1RQ04912 1400 aa9.15□□□□□ -0.94
ZEB1-216ENST00000559496 KIF1AQ12756 1690 aa9.15□□□□□ -0.95
ZEB1-216ENST00000559496 ATP2B4P23634 1241 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 GATA4P43694 442 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 MTHFSP49914 203 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 HNRNPUQ00839 825 aaKnown RBP eCLIP9.14□□□□□ -0.95
ZEB1-216ENST00000559496 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 TTC9Q92623 222 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 CFAP53Q96M91 514 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 ORAI2Q96SN7 254 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 LPIN3Q9BQK8 851 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 STIM2Q9P246 746 aa9.14□□□□□ -0.95
ZEB1-216ENST00000559496 OVOS2A0A0J9YW53 1432 aa9.13□□□□□ -0.95
ZEB1-216ENST00000559496 OVOS2Q6IE36 1432 aa9.13□□□□□ -0.95
ZEB1-216ENST00000559496 WDR43Q15061 677 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms