RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
SMAD3-211ENST00000559460 RAPGEFL1Q9UHV5 662 aa12.41□□□□□ -0.42
SMAD3-211ENST00000559460 ANKRD18BA2A2Z9 1011 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 TAF5LO75529 589 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 HMGCRP04035 888 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
SMAD3-211ENST00000559460 UBE3BQ7Z3V4 1068 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 MYH3P11055 1940 aa12.4□□□□□ -0.42
SMAD3-211ENST00000559460 CACNB3P54284 484 aa12.39□□□□□ -0.43
SMAD3-211ENST00000559460 MYLIPQ8WY64 445 aa12.39□□□□□ -0.43
SMAD3-211ENST00000559460 PRKAG2Q9UGJ0 569 aa12.39□□□□□ -0.43
SMAD3-211ENST00000559460 SNAP23O00161 211 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 PLIN1O60240 522 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 INPP5BP32019 993 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 GADL1Q6ZQY3 521 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 TEKT1Q969V4 418 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 CHMP3Q9Y3E7 222 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 MGAMO43451 1857 aa12.38□□□□□ -0.43
SMAD3-211ENST00000559460 CXCL11O14625 94 aa12.37□□□□□ -0.43
SMAD3-211ENST00000559460 FRAT2O75474 233 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-211ENST00000559460 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
SMAD3-211ENST00000559460 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
SMAD3-211ENST00000559460 RPAP1Q9BWH6 1393 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-211ENST00000559460 HOXD11P31277 338 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-211ENST00000559460 IFIT5Q13325 482 aaKnown RBP12.36□□□□□ -0.43
SMAD3-211ENST00000559460 VPS37DQ86XT2 251 aa12.36□□□□□ -0.43
SMAD3-211ENST00000559460 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
SMAD3-211ENST00000559460 SEMA6BQ9H3T3 888 aa12.36□□□□□ -0.43
SMAD3-211ENST00000559460 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-211ENST00000559460 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 ELL2O00472 640 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-211ENST00000559460 IGKV5-2P06315 115 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
SMAD3-211ENST00000559460 MAP3K12Q12852 859 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
SMAD3-211ENST00000559460 CCDC30Q5VVM6 783 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 GPAT2Q6NUI2 795 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 KSR2Q6VAB6 950 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 PICK1Q9NRD5 415 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 OGDHLQ9ULD0 1010 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 SLC45A1Q9Y2W3 748 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 PFASO15067 1338 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 MAST3O60307 1309 aa12.35□□□□□ -0.43
SMAD3-211ENST00000559460 NEURL1BA8MQ27 555 aa12.34□□□□□ -0.43
SMAD3-211ENST00000559460 HIBADHP31937 336 aaKnown RBP12.34□□□□□ -0.43
SMAD3-211ENST00000559460 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-211ENST00000559460 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
SMAD3-211ENST00000559460 FKBP1CQ5VVH2 108 aa12.34□□□□□ -0.43
SMAD3-211ENST00000559460 TDRD7Q8NHU6 1098 aaKnown RBP12.34□□□□□ -0.43
SMAD3-211ENST00000559460 TBC1D22AQ8WUA7 517 aa12.34□□□□□ -0.43
SMAD3-211ENST00000559460 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
SMAD3-211ENST00000559460 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
SMAD3-211ENST00000559460 H7C1W4 665 aa12.33□□□□□ -0.44
SMAD3-211ENST00000559460 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-211ENST00000559460 MOGSQ13724 837 aa12.33□□□□□ -0.44
SMAD3-211ENST00000559460 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
SMAD3-211ENST00000559460 LRRC26Q2I0M4 334 aa12.33□□□□□ -0.44
SMAD3-211ENST00000559460 CNNM1Q9NRU3 951 aa12.33□□□□□ -0.44
SMAD3-211ENST00000559460 MBIPQ9NS73 344 aa12.33□□□□□ -0.44
SMAD3-211ENST00000559460 A0A0G2JLL6 359 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-211ENST00000559460 CSF1RP07333 972 aa12.32□□□□□ -0.44
SMAD3-211ENST00000559460 GYG1P46976 350 aa12.32□□□□□ -0.44
SMAD3-211ENST00000559460 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
SMAD3-211ENST00000559460 PRRT2Q7Z6L0 340 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-211ENST00000559460 ZDHHC15Q96MV8 337 aa12.32□□□□□ -0.44
SMAD3-211ENST00000559460 STK31Q9BXU1 1019 aa12.32□□□□□ -0.44
SMAD3-211ENST00000559460 HCN4Q9Y3Q4 1203 aa12.32□□□□□ -0.44
SMAD3-211ENST00000559460 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
SMAD3-211ENST00000559460 SMAD3P84022 425 aaKnown RBP12.31□□□□□ -0.44
SMAD3-211ENST00000559460 CCDC57Q2TAC2 916 aa12.31□□□□□ -0.44
SMAD3-211ENST00000559460 CCDC146Q8IYE0 955 aa12.31□□□□□ -0.44
SMAD3-211ENST00000559460 FAM151AQ8WW52 585 aa12.31□□□□□ -0.44
SMAD3-211ENST00000559460 ZNF112Q9UJU3 913 aa12.31□□□□□ -0.44
SMAD3-211ENST00000559460 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
SMAD3-211ENST00000559460 CALD1Q05682 793 aaKnown RBP12.3□□□□□ -0.44
SMAD3-211ENST00000559460 TCP10Q12799 353 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 TRIM32Q13049 653 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 UBE4AQ14139 1066 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 GCKRQ14397 625 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 CAVIN4Q5BKX8 364 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 SCYL3Q8IZE3 742 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 C1QTNF1Q9BXJ1 281 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 AGTPBP1Q9UPW5 1226 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 VCANP13611 3396 aa12.3□□□□□ -0.44
SMAD3-211ENST00000559460 COL6A1P12109 1028 aa12.29□□□□□ -0.44
SMAD3-211ENST00000559460 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-211ENST00000559460 GCLCP48506 637 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-211ENST00000559460 PABPC4Q13310 644 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMAD3-211ENST00000559460 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
SMAD3-211ENST00000559460 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-211ENST00000559460 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms