RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 OSBP2Q969R2 916 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 HACL1Q9UJ83 578 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 PCNTO95613 3336 aa17.9■□□□□ 0.46
SNRPA1-207ENST00000559309 IQCA1LA6NCM1 817 aa17.89■□□□□ 0.45
SNRPA1-207ENST00000559309 CYP7A1P22680 504 aa17.89■□□□□ 0.45
SNRPA1-207ENST00000559309 LRRFIP1Q32MZ4 808 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-207ENST00000559309 RILPL2Q969X0 211 aa17.89■□□□□ 0.45
SNRPA1-207ENST00000559309 PUS7LQ9H0K6 701 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-207ENST00000559309 H7C1D1 291 aa17.88■□□□□ 0.45
SNRPA1-207ENST00000559309 HIP1O00291 1037 aa17.88■□□□□ 0.45
SNRPA1-207ENST00000559309 USP50Q70EL3 339 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-207ENST00000559309 SAMD7Q7Z3H4 446 aa17.88■□□□□ 0.45
SNRPA1-207ENST00000559309 CERS3Q8IU89 383 aa17.88■□□□□ 0.45
SNRPA1-207ENST00000559309 IL25Q9H293 177 aa17.88■□□□□ 0.45
SNRPA1-207ENST00000559309 HELLSQ9NRZ9 838 aa17.88■□□□□ 0.45
SNRPA1-207ENST00000559309 A0A0D9SFI3 127 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 NPM3O75607 178 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 EPHX2P34913 555 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 NMIQ13287 307 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 KIF4BQ2VIQ3 1234 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 NBPF9Q3BBW0 867 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 SPDYE2Q495Y8 402 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 FKBP1CQ5VVH2 108 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 JMYQ8N9B5 988 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 KLRG1Q96E93 195 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 FAM227BQ96M60 508 aa17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 MKRN1Q9UHC7 482 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-207ENST00000559309 M0R2C6 588 aa17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 FOXP2O15409 715 aa17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 VEGFAP15692 232 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 LMOD1P29536 600 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 BTDP43251 543 aa17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 DLGAP5Q15398 846 aa17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 CDC42EP5Q6NZY7 148 aa17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 ZC3H15Q8WU90 426 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 STRBPQ96SI9 672 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 SEC62Q99442 399 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 IDI2Q9BXS1 227 aa17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 RRAGCQ9HB90 399 aa17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 COL2A1P02458 1487 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-207ENST00000559309 WDHD1O75717 1129 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-207ENST00000559309 TBC1D10BQ4KMP7 808 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-207ENST00000559309 RAD50Q92878 1312 aa17.85■□□□□ 0.45
SNRPA1-207ENST00000559309 PITPNM2Q9BZ72 1349 aa17.85■□□□□ 0.45
SNRPA1-207ENST00000559309 SGSM2O43147 1006 aa17.84■□□□□ 0.45
SNRPA1-207ENST00000559309 DYNLL1P63167 89 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-207ENST00000559309 MCMDC2Q4G0Z9 681 aa17.84■□□□□ 0.45
SNRPA1-207ENST00000559309 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
SNRPA1-207ENST00000559309 LCORLQ8N3X6 602 aa17.84■□□□□ 0.45
SNRPA1-207ENST00000559309 MIGA1Q8NAN2 632 aa17.84■□□□□ 0.45
SNRPA1-207ENST00000559309 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNRPA1-207ENST00000559309 CNTNAP1P78357 1384 aa17.83■□□□□ 0.45
SNRPA1-207ENST00000559309 ASTN2O75129 1339 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 MAGEB6P1A0A0J9YX57 407 aa17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 CDC45O75419 566 aa17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 BAG3O95817 575 aa17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 PLCG2P16885 1265 aa17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 ZNF589Q86UQ0 364 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 SMC1BQ8NDV3 1235 aa17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 SH3RF3Q8TEJ3 882 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 TDRD3Q9H7E2 651 aaKnown RBP17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 ZNF70Q9UC06 446 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-207ENST00000559309 POLR2AP24928 1970 aaKnown RBP17.82■□□□□ 0.44
SNRPA1-207ENST00000559309 RPAP1Q9BWH6 1393 aaPredicted RBP17.82■□□□□ 0.44
SNRPA1-207ENST00000559309 SIPA1L1O43166 1804 aa17.82■□□□□ 0.44
SNRPA1-207ENST00000559309 GPAA1O43292 621 aa17.82■□□□□ 0.44
SNRPA1-207ENST00000559309 MBD4O95243 580 aa17.82■□□□□ 0.44
SNRPA1-207ENST00000559309 HTRA3P83110 453 aa17.82■□□□□ 0.44
SNRPA1-207ENST00000559309 FAM198AQ9UFP1 575 aa17.82■□□□□ 0.44
SNRPA1-207ENST00000559309 ATRNL1Q5VV63 1379 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 ZMYM6O95789 1325 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 NFIAQ12857 509 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 CWC27Q6UX04 472 aaKnown RBP17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 FAM83AQ86UY5 434 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 ESYT1Q9BSJ8 1104 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 ARMT1Q9H993 441 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 DDX4Q9NQI0 724 aaKnown RBP17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 DIAPH3Q9NSV4 1193 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 USP40Q9NVE5 1235 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 NAV1Q8NEY1 1877 aa17.81■□□□□ 0.44
SNRPA1-207ENST00000559309 GSG1L2A8MUP6 293 aa17.8■□□□□ 0.44
SNRPA1-207ENST00000559309 ENTPD3O75355 529 aa17.8■□□□□ 0.44
SNRPA1-207ENST00000559309 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
SNRPA1-207ENST00000559309 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
SNRPA1-207ENST00000559309 RBM5P52756 815 aaKnown RBP eCLIP17.8■□□□□ 0.446e-6■□□□□ 9
SNRPA1-207ENST00000559309 GIMAP6Q6P9H5 292 aa17.8■□□□□ 0.44
SNRPA1-207ENST00000559309 AIDAQ96BJ3 306 aa17.8■□□□□ 0.44
SNRPA1-207ENST00000559309 EPB41L4AQ9HCS5 686 aaPredicted RBP17.8■□□□□ 0.44
SNRPA1-207ENST00000559309 MYH1P12882 1939 aa17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 GNAT2P19087 354 aa17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 ALX1Q15699 326 aa17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 RBM26Q5T8P6 1007 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 CCDC129Q6ZRS4 1044 aa17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 TEPSINQ96N21 525 aa17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 DCP1AQ9NPI6 582 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-207ENST00000559309 FLT1P17948 1338 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms