RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 STAP2Q9UGK3 403 aa13.96□□□□□ -0.17
SNX1-204ENST00000559061 GPR75-ASB3A0A0A6YYF3 556 aa13.95□□□□□ -0.18
SNX1-204ENST00000559061 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
SNX1-204ENST00000559061 RBM5P52756 815 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX1-204ENST00000559061 PDE1AP54750 535 aa13.95□□□□□ -0.18
SNX1-204ENST00000559061 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
SNX1-204ENST00000559061 DZIP1Q86YF9 867 aaKnown RBP13.95□□□□□ -0.18
SNX1-204ENST00000559061 DCPSQ96C86 337 aaKnown RBP13.95□□□□□ -0.18
SNX1-204ENST00000559061 PAG1Q9NWQ8 432 aa13.95□□□□□ -0.18
SNX1-204ENST00000559061 RAI14Q9P0K7 980 aa13.95□□□□□ -0.18
SNX1-204ENST00000559061 FAM198AQ9UFP1 575 aa13.95□□□□□ -0.18
SNX1-204ENST00000559061 CEP350Q5VT06 3117 aa13.95□□□□□ -0.18
SNX1-204ENST00000559061 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
SNX1-204ENST00000559061 WDHD1O75717 1129 aaPredicted RBP13.94□□□□□ -0.18
SNX1-204ENST00000559061 BTDP43251 543 aa13.94□□□□□ -0.18
SNX1-204ENST00000559061 APLP1P51693 650 aa13.94□□□□□ -0.18
SNX1-204ENST00000559061 SPTY2D1Q68D10 685 aaPredicted RBP13.94□□□□□ -0.18
SNX1-204ENST00000559061 PLEKHM2Q8IWE5 1019 aa13.94□□□□□ -0.18
SNX1-204ENST00000559061 ZFPM1Q8IX07 1006 aa13.94□□□□□ -0.18
SNX1-204ENST00000559061 DDX4Q9NQI0 724 aaKnown RBP13.94□□□□□ -0.18
SNX1-204ENST00000559061 LRP2BPQ9P2M1 347 aa13.94□□□□□ -0.18
SNX1-204ENST00000559061 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 IDH1O75874 414 aaKnown RBP13.93□□□□□ -0.18
SNX1-204ENST00000559061 MAP4K4O95819 1239 aaPredicted RBP13.93□□□□□ -0.18
SNX1-204ENST00000559061 PDE6AP16499 860 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 APOBEC3FQ8IUX4 373 aaKnown RBP13.93□□□□□ -0.18
SNX1-204ENST00000559061 SULF1Q8IWU6 871 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 MAGEB6Q8N7X4 407 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 DEFB129Q9H1M3 183 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 VEZTQ9HBM0 779 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 FZD1Q9UP38 647 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 ATRNL1Q5VV63 1379 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 THSD7BQ9C0I4 1608 aa13.93□□□□□ -0.18
SNX1-204ENST00000559061 CELF2O95319 508 aaKnown RBP13.92□□□□□ -0.18
SNX1-204ENST00000559061 DYNLL1P63167 89 aaKnown RBP13.92□□□□□ -0.18
SNX1-204ENST00000559061 RASA3Q14644 834 aa13.92□□□□□ -0.18
SNX1-204ENST00000559061 NAA16Q6N069 864 aaPredicted RBP13.92□□□□□ -0.18
SNX1-204ENST00000559061 MOB2Q70IA6 237 aa13.92□□□□□ -0.18
SNX1-204ENST00000559061 SH3BP5LQ7L8J4 393 aa13.92□□□□□ -0.18
SNX1-204ENST00000559061 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
SNX1-204ENST00000559061 RIOK1Q9BRS2 568 aaKnown RBP13.92□□□□□ -0.18
SNX1-204ENST00000559061 TMEM39BQ9GZU3 492 aa13.92□□□□□ -0.18
SNX1-204ENST00000559061 NAV1Q8NEY1 1877 aa13.92□□□□□ -0.18
SNX1-204ENST00000559061 AK9Q5TCS8 1911 aa13.92□□□□□ -0.18
SNX1-204ENST00000559061 SLURP2P0DP57 97 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 ADD2P35612 726 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 PPP4CP60510 307 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 NBPF12Q5TAG4 269 aaPredicted RBP13.91□□□□□ -0.18
SNX1-204ENST00000559061 FKBP1CQ5VVH2 108 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 IDI2Q9BXS1 227 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 USP40Q9NVE5 1235 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 AATFQ9NY61 560 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNX1-204ENST00000559061 RPAP1Q9BWH6 1393 aaPredicted RBP13.91□□□□□ -0.18
SNX1-204ENST00000559061 LAMB1P07942 1786 aa13.91□□□□□ -0.18
SNX1-204ENST00000559061 ZNF532Q9HCE3 1301 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 TMEM88BA6NKF7 163 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 MYO1BO43795 1136 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 GLRX3O76003 335 aaKnown RBP13.9□□□□□ -0.18
SNX1-204ENST00000559061 CYP7A1P22680 504 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 TTF1Q15361 905 aaPredicted RBP13.9□□□□□ -0.18
SNX1-204ENST00000559061 DNAJC5GQ8N7S2 189 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 KBTBD3Q8NAB2 608 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 MIGA1Q8NAN2 632 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 ZNF408Q9H9D4 720 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 MYH1P12882 1939 aa13.9□□□□□ -0.18
SNX1-204ENST00000559061 IGSF3O75054 1194 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 GSPT1P15170 499 aaKnown RBP13.89□□□□□ -0.19
SNX1-204ENST00000559061 RGS3P49796 1198 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 GSTO1P78417 241 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 MAP3K12Q12852 859 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 SLC9C2Q5TAH2 1124 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 SAPCD2Q86UD0 394 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 FAM83AQ86UY5 434 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 PPP2R3BQ9Y5P8 575 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
SNX1-204ENST00000559061 BAZ2AQ9UIF9 1905 aaKnown RBP13.88□□□□□ -0.19
SNX1-204ENST00000559061 COL2A1P02458 1487 aaPredicted RBP13.88□□□□□ -0.19
SNX1-204ENST00000559061 DDTLA6NHG4 134 aaPredicted RBP13.88□□□□□ -0.19
SNX1-204ENST00000559061 EVX2Q03828 476 aa13.88□□□□□ -0.19
SNX1-204ENST00000559061 TCP10Q12799 353 aa13.88□□□□□ -0.19
SNX1-204ENST00000559061 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
SNX1-204ENST00000559061 MKRN1Q9UHC7 482 aaKnown RBP13.88□□□□□ -0.19
SNX1-204ENST00000559061 RASSF10A6NK89 507 aa13.87□□□□□ -0.19
SNX1-204ENST00000559061 LDHCP07864 332 aa13.87□□□□□ -0.19
SNX1-204ENST00000559061 UBE3CQ15386 1083 aa13.87□□□□□ -0.19
SNX1-204ENST00000559061 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
SNX1-204ENST00000559061 SLF2Q8IX21 1173 aa13.87□□□□□ -0.19
SNX1-204ENST00000559061 FAM151AQ8WW52 585 aa13.87□□□□□ -0.19
SNX1-204ENST00000559061 OSBP2Q969R2 916 aa13.87□□□□□ -0.19
SNX1-204ENST00000559061 PUS7LQ9H0K6 701 aaKnown RBP13.87□□□□□ -0.19
SNX1-204ENST00000559061 GBA2Q9HCG7 927 aaPredicted RBP13.87□□□□□ -0.19
SNX1-204ENST00000559061 FLT1P17948 1338 aa13.87□□□□□ -0.19
SNX1-204ENST00000559061 M0R2C6 588 aa13.86□□□□□ -0.19
SNX1-204ENST00000559061 ERC2O15083 957 aa13.86□□□□□ -0.19
SNX1-204ENST00000559061 ENTPD3O75355 529 aa13.86□□□□□ -0.19
SNX1-204ENST00000559061 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
SNX1-204ENST00000559061 PICALMQ13492 652 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms