RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 FAM181AQ8N9Y4 354 aa5.22□□□□□ -1.57
LRRC28-212ENST00000558911 HELQQ8TDG4 1101 aa5.22□□□□□ -1.57
LRRC28-212ENST00000558911 CDK11AQ9UQ88 783 aaPredicted RBP5.22□□□□□ -1.57
LRRC28-212ENST00000558911 EIF5BO60841 1220 aaKnown RBP5.21□□□□□ -1.58
LRRC28-212ENST00000558911 ATG7O95352 703 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 CYP11A1P05108 521 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 CD8BP10966 210 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 PDE3AQ14432 1141 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 ZNF423Q2M1K9 1284 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 PEAR1Q5VY43 1037 aaPredicted RBP5.21□□□□□ -1.58
LRRC28-212ENST00000558911 PLD6Q8N2A8 252 aaKnown RBP5.21□□□□□ -1.58
LRRC28-212ENST00000558911 SNX29Q8TEQ0 813 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 PUS7Q96PZ0 661 aaKnown RBP5.21□□□□□ -1.58
LRRC28-212ENST00000558911 SLC38A3Q99624 504 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 CORO1BQ9BR76 489 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 BHLHE41Q9C0J9 482 aaPredicted RBP5.21□□□□□ -1.58
LRRC28-212ENST00000558911 ACSS3Q9H6R3 686 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 USP35Q9P2H5 1018 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 AMOTL2Q9Y2J4 779 aa5.21□□□□□ -1.58
LRRC28-212ENST00000558911 RIMBP3CA6NJZ7 1639 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 RIMBP3BA6NNM3 1639 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 RIMBP3Q9UFD9 1639 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 A0A096LPE4 126 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-212ENST00000558911 A0A1W2PPZ6 126 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 SPRED3Q2MJR0 410 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 OGFOD3Q6PK18 319 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 SPOCD1Q6ZMY3 1216 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 ARHGAP27Q6ZUM4 889 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 STK11IPQ8N1F8 1099 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 PI4K2BQ8TCG2 481 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 GTF3C2Q8WUA4 911 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-212ENST00000558911 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 CLEC4MQ9H2X3 399 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-212ENST00000558911 C1GALT1Q9NS00 363 aa5.2□□□□□ -1.58
LRRC28-212ENST00000558911 RNASE1P07998 156 aaKnown RBP5.19□□□□□ -1.58
LRRC28-212ENST00000558911 FAM87AP0C7U9 286 aa5.19□□□□□ -1.58
LRRC28-212ENST00000558911 CDK5R2Q13319 367 aa5.19□□□□□ -1.58
LRRC28-212ENST00000558911 CYP27C1Q4G0S4 372 aa5.19□□□□□ -1.58
LRRC28-212ENST00000558911 NRSN2Q9GZP1 204 aa5.19□□□□□ -1.58
LRRC28-212ENST00000558911 UNC79Q9P2D8 2635 aa5.19□□□□□ -1.58
LRRC28-212ENST00000558911 GRIA4P48058 902 aa5.18□□□□□ -1.58
LRRC28-212ENST00000558911 SRPK2P78362 688 aaKnown RBP5.18□□□□□ -1.58
LRRC28-212ENST00000558911 HP1BP3Q5SSJ5 553 aaPredicted RBP5.18□□□□□ -1.58
LRRC28-212ENST00000558911 ALKBH2Q6NS38 261 aa5.18□□□□□ -1.58
LRRC28-212ENST00000558911 WFDC3Q8IUB2 231 aa5.18□□□□□ -1.58
LRRC28-212ENST00000558911 LRRN4CLQ8ND94 238 aa5.18□□□□□ -1.58
LRRC28-212ENST00000558911 NETO1Q8TDF5 533 aa5.18□□□□□ -1.58
LRRC28-212ENST00000558911 ZC3H12CQ9C0D7 883 aaKnown RBP5.18□□□□□ -1.58
LRRC28-212ENST00000558911 LIN7BQ9HAP6 207 aa5.18□□□□□ -1.58
LRRC28-212ENST00000558911 ADAMTS6Q9UKP5 1117 aa5.18□□□□□ -1.58
LRRC28-212ENST00000558911 AOC2O75106 756 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 PPP1R15AO75807 674 aaPredicted RBP5.17□□□□□ -1.58
LRRC28-212ENST00000558911 FUT4P22083 530 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 SEZ6L2Q6UXD5 910 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 ATG4DQ86TL0 474 aaPredicted RBP5.17□□□□□ -1.58
LRRC28-212ENST00000558911 GLIS3Q8NEA6 775 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 PIDD1Q9HB75 910 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 ZFYVE1Q9HBF4 777 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 ZFYVE28Q9HCC9 887 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 MBNL3Q9NUK0 354 aaKnown RBP5.17□□□□□ -1.58
LRRC28-212ENST00000558911 PPP1R9AQ9ULJ8 1098 aa5.17□□□□□ -1.58
LRRC28-212ENST00000558911 A0A1W2PP55 124 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 LRRC10BA6NIK2 292 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 EIF4EBP3O60516 100 aaPredicted RBP5.16□□□□□ -1.58
LRRC28-212ENST00000558911 RNGTTO60942 597 aaKnown RBP5.16□□□□□ -1.58
LRRC28-212ENST00000558911 ZNF865P0CJ78 1059 aaPredicted RBP5.16□□□□□ -1.58
LRRC28-212ENST00000558911 LIG1P18858 919 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 ZNF157P51786 506 aaPredicted RBP5.16□□□□□ -1.58
LRRC28-212ENST00000558911 EHHADHQ08426 723 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 PDE4CQ08493 712 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 AOC3Q16853 763 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 DDX54Q8TDD1 881 aaKnown RBP5.16□□□□□ -1.58
LRRC28-212ENST00000558911 MISP3Q96FF7 219 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 TRIM56Q9BRZ2 755 aaKnown RBP5.16□□□□□ -1.58
LRRC28-212ENST00000558911 ANO2Q9NQ90 1003 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 PRDM7Q9NQW5 492 aa5.16□□□□□ -1.58
LRRC28-212ENST00000558911 PATL2C9JE40 543 aaKnown RBP5.15□□□□□ -1.59
LRRC28-212ENST00000558911 ITIH2P19823 946 aa5.15□□□□□ -1.59
LRRC28-212ENST00000558911 MLANAQ16655 118 aa5.15□□□□□ -1.59
LRRC28-212ENST00000558911 CCNJLQ8IV13 435 aa5.15□□□□□ -1.59
LRRC28-212ENST00000558911 TMEM40Q8WWA1 233 aa5.15□□□□□ -1.59
LRRC28-212ENST00000558911 WDR18Q9BV38 432 aa5.15□□□□□ -1.59
LRRC28-212ENST00000558911 CCDC87Q9NVE4 849 aa5.15□□□□□ -1.59
LRRC28-212ENST00000558911 U3KQE9 123 aa5.15□□□□□ -1.59
LRRC28-212ENST00000558911 LEFTY1O75610 366 aa5.14□□□□□ -1.59
LRRC28-212ENST00000558911 ABL1P00519 1130 aa5.14□□□□□ -1.59
LRRC28-212ENST00000558911 USP5P45974 858 aa5.14□□□□□ -1.59
LRRC28-212ENST00000558911 KCNA1Q09470 495 aa5.14□□□□□ -1.59
LRRC28-212ENST00000558911 WDR89Q96FK6 387 aaPredicted RBP5.14□□□□□ -1.59
LRRC28-212ENST00000558911 HRASLS5Q96KN8 279 aa5.14□□□□□ -1.59
LRRC28-212ENST00000558911 TCF12Q99081 682 aa5.14□□□□□ -1.59
LRRC28-212ENST00000558911 CACNA1AO00555 2505 aa5.13□□□□□ -1.59
LRRC28-212ENST00000558911 FZD6O60353 706 aa5.13□□□□□ -1.59
LRRC28-212ENST00000558911 FAM13AO94988 1023 aa5.13□□□□□ -1.59
LRRC28-212ENST00000558911 HCLS1P14317 486 aaPredicted RBP5.13□□□□□ -1.59
LRRC28-212ENST00000558911 PRKCQQ04759 706 aa5.13□□□□□ -1.59
LRRC28-212ENST00000558911 IFI16Q16666 785 aaKnown RBP5.13□□□□□ -1.59
LRRC28-212ENST00000558911 USPL1Q5W0Q7 1092 aa5.13□□□□□ -1.59
LRRC28-212ENST00000558911 PBXIP1Q96AQ6 731 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms