RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 APOBEC3HQ6NTF7 200 aaKnown RBP19.23■□□□□ 0.67
CPNE6-208ENST00000558795 PPATQ06203 517 aa19.22■□□□□ 0.67
CPNE6-208ENST00000558795 HHIPL2Q6UWX4 724 aa19.22■□□□□ 0.67
CPNE6-208ENST00000558795 VGLL2Q8N8G2 317 aa19.22■□□□□ 0.67
CPNE6-208ENST00000558795 MYH13Q9UKX3 1938 aa19.21■□□□□ 0.67
CPNE6-208ENST00000558795 IFIT1P09914 478 aaKnown RBP19.21■□□□□ 0.67
CPNE6-208ENST00000558795 PUM3Q15397 648 aaKnown RBP19.21■□□□□ 0.67
CPNE6-208ENST00000558795 MIGA2Q7L4E1 593 aa19.21■□□□□ 0.67
CPNE6-208ENST00000558795 ANKRD44Q8N8A2 993 aa19.21■□□□□ 0.67
CPNE6-208ENST00000558795 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.67
CPNE6-208ENST00000558795 CPA4Q9UI42 421 aa19.21■□□□□ 0.67
CPNE6-208ENST00000558795 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
CPNE6-208ENST00000558795 BRCA2P51587 3418 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 AK9Q5TCS8 1911 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 H0YGN5 161 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 HOXD10P28358 340 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 INPP5BP32019 993 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 C17orf99Q6UX52 265 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 ANKRD23Q86SG2 305 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 KLHDC4Q8TBB5 520 aa19.2■□□□□ 0.66
CPNE6-208ENST00000558795 PSMC4P43686 418 aa19.19■□□□□ 0.66
CPNE6-208ENST00000558795 WDR66Q8TBY9 1149 aa19.19■□□□□ 0.66
CPNE6-208ENST00000558795 RAET1EQ8TD07 263 aa19.19■□□□□ 0.66
CPNE6-208ENST00000558795 FAM151AQ8WW52 585 aa19.19■□□□□ 0.66
CPNE6-208ENST00000558795 SRRDQ9UH36 339 aa19.19■□□□□ 0.66
CPNE6-208ENST00000558795 CEP290O15078 2479 aa19.18■□□□□ 0.66
CPNE6-208ENST00000558795 PDHXO00330 501 aa19.18■□□□□ 0.66
CPNE6-208ENST00000558795 FMNL1O95466 1100 aaPredicted RBP19.18■□□□□ 0.66
CPNE6-208ENST00000558795 SLC5A1P13866 664 aa19.18■□□□□ 0.66
CPNE6-208ENST00000558795 TRIM47Q96LD4 638 aa19.18■□□□□ 0.66
CPNE6-208ENST00000558795 FGFR2P21802 821 aa19.17■□□□□ 0.66
CPNE6-208ENST00000558795 TCP10Q12799 353 aa19.17■□□□□ 0.66
CPNE6-208ENST00000558795 MTFR1Q15390 333 aa19.17■□□□□ 0.66
CPNE6-208ENST00000558795 NKX2-3Q8TAU0 364 aa19.17■□□□□ 0.66
CPNE6-208ENST00000558795 DPF3Q92784 378 aa19.17■□□□□ 0.66
CPNE6-208ENST00000558795 KCNH4Q9UQ05 1017 aa19.17■□□□□ 0.66
CPNE6-208ENST00000558795 OSBPP22059 807 aa19.16■□□□□ 0.66
CPNE6-208ENST00000558795 CTGFP29279 349 aa19.16■□□□□ 0.66
CPNE6-208ENST00000558795 GRK4P32298 578 aa19.16■□□□□ 0.66
CPNE6-208ENST00000558795 LPIN2Q92539 896 aa19.16■□□□□ 0.66
CPNE6-208ENST00000558795 BIN2Q9UBW5 565 aaPredicted RBP19.16■□□□□ 0.66
CPNE6-208ENST00000558795 PTPRCP08575 1304 aa19.16■□□□□ 0.66
CPNE6-208ENST00000558795 MYPNQ86TC9 1320 aa19.16■□□□□ 0.66
CPNE6-208ENST00000558795 CDC42EP5Q6NZY7 148 aa19.15■□□□□ 0.66
CPNE6-208ENST00000558795 CHRDL2Q6WN34 429 aa19.15■□□□□ 0.66
CPNE6-208ENST00000558795 SHISA4Q96DD7 197 aa19.15■□□□□ 0.66
CPNE6-208ENST00000558795 PARK7Q99497 189 aaKnown RBP19.15■□□□□ 0.66
CPNE6-208ENST00000558795 ZNF112Q9UJU3 913 aa19.15■□□□□ 0.66
CPNE6-208ENST00000558795 DAGLAQ9Y4D2 1042 aa19.15■□□□□ 0.66
CPNE6-208ENST00000558795 TRIOBPQ9H2D6 2365 aa19.15■□□□□ 0.66
CPNE6-208ENST00000558795 EYA2O00167 538 aa19.14■□□□□ 0.65
CPNE6-208ENST00000558795 DIXDC1Q155Q3 683 aa19.14■□□□□ 0.65
CPNE6-208ENST00000558795 MRPL50Q8N5N7 158 aaKnown RBP19.14■□□□□ 0.65
CPNE6-208ENST00000558795 ADGRA2Q96PE1 1338 aa19.14■□□□□ 0.65
CPNE6-208ENST00000558795 CCL5P13501 91 aa19.13■□□□□ 0.65
CPNE6-208ENST00000558795 FCGRTP55899 365 aa19.13■□□□□ 0.65
CPNE6-208ENST00000558795 UBXN2AP68543 259 aa19.13■□□□□ 0.65
CPNE6-208ENST00000558795 NFIAQ12857 509 aa19.13■□□□□ 0.65
CPNE6-208ENST00000558795 NOL9Q5SY16 702 aaKnown RBP19.13■□□□□ 0.65
CPNE6-208ENST00000558795 HTATIP2Q9BUP3 242 aa19.13■□□□□ 0.65
CPNE6-208ENST00000558795 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
CPNE6-208ENST00000558795 RNF208Q9H0X6 261 aa19.13■□□□□ 0.65
CPNE6-208ENST00000558795 GNL3LQ9NVN8 582 aaKnown RBP19.13■□□□□ 0.65
CPNE6-208ENST00000558795 CXCL11O14625 94 aa19.12■□□□□ 0.65
CPNE6-208ENST00000558795 LDHBP07195 334 aaKnown RBP19.12■□□□□ 0.65
CPNE6-208ENST00000558795 GJB1P08034 283 aa19.12■□□□□ 0.65
CPNE6-208ENST00000558795 GJA8P48165 433 aa19.12■□□□□ 0.65
CPNE6-208ENST00000558795 USP40Q9NVE5 1235 aa19.12■□□□□ 0.65
CPNE6-208ENST00000558795 MGAMO43451 1857 aa19.11■□□□□ 0.65
CPNE6-208ENST00000558795 PRDX5P30044 214 aa19.11■□□□□ 0.65
CPNE6-208ENST00000558795 PRKCZQ05513 592 aa19.11■□□□□ 0.65
CPNE6-208ENST00000558795 MOGSQ13724 837 aa19.11■□□□□ 0.65
CPNE6-208ENST00000558795 SLAIN1Q8ND83 568 aa19.11■□□□□ 0.65
CPNE6-208ENST00000558795 FAM198AQ9UFP1 575 aa19.11■□□□□ 0.65
CPNE6-208ENST00000558795 DOCK2Q92608 1830 aa19.11■□□□□ 0.65
CPNE6-208ENST00000558795 CYP2C8P10632 490 aa19.1■□□□□ 0.65
CPNE6-208ENST00000558795 RFX5P48382 616 aaPredicted RBP19.1■□□□□ 0.65
CPNE6-208ENST00000558795 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
CPNE6-208ENST00000558795 ATP2B3Q16720 1220 aa19.1■□□□□ 0.65
CPNE6-208ENST00000558795 FASTKD5Q7L8L6 764 aaKnown RBP19.1■□□□□ 0.65
CPNE6-208ENST00000558795 PICK1Q9NRD5 415 aa19.1■□□□□ 0.65
CPNE6-208ENST00000558795 BCRP11274 1271 aa19.09■□□□□ 0.65
CPNE6-208ENST00000558795 GPAT2Q6NUI2 795 aa19.09■□□□□ 0.65
CPNE6-208ENST00000558795 SIL1Q9H173 461 aa19.09■□□□□ 0.65
CPNE6-208ENST00000558795 RBM27Q9P2N5 1060 aaKnown RBP19.09■□□□□ 0.65
CPNE6-208ENST00000558795 NR2E3Q9Y5X4 410 aa19.09■□□□□ 0.65
CPNE6-208ENST00000558795 GADL1Q6ZQY3 521 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 ATG9AQ7Z3C6 839 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
CPNE6-208ENST00000558795 ZFPM1Q8IX07 1006 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 SCYL3Q8IZE3 742 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 U2AF1L4Q8WU68 220 aaKnown RBP19.08■□□□□ 0.64
CPNE6-208ENST00000558795 SSH1Q8WYL5 1049 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 CEP126Q9P2H0 1117 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 DENND2AQ9ULE3 1009 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 ZHX2Q9Y6X8 837 aa19.08■□□□□ 0.64
CPNE6-208ENST00000558795 SALL1Q9NSC2 1324 aa19.07■□□□□ 0.64
CPNE6-208ENST00000558795 SEMA3EO15041 775 aa19.07■□□□□ 0.64
CPNE6-208ENST00000558795 FARP2O94887 1054 aaPredicted RBP19.07■□□□□ 0.64
CPNE6-208ENST00000558795 UBE2Q1Q7Z7E8 422 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms