RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
MARK3-213ENST00000558611 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
MARK3-213ENST00000558611 GGT7Q9UJ14 662 aa13.35□□□□□ -0.27
MARK3-213ENST00000558611 PCDHGB7Q9Y5F8 929 aa13.35□□□□□ -0.27
MARK3-213ENST00000558611 ANKRD26Q9UPS8 1709 aa13.35□□□□□ -0.27
MARK3-213ENST00000558611 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 RBL2Q08999 1139 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 GIMAP6Q6P9H5 292 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 VPS37DQ86XT2 251 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 EPS8L3Q8TE67 593 aaKnown RBP13.34□□□□□ -0.27
MARK3-213ENST00000558611 BTG4Q9NY30 223 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 ABCC6O95255 1503 aa13.34□□□□□ -0.27
MARK3-213ENST00000558611 ANKRD36BQ8N2N9 1353 aa13.33□□□□□ -0.27
MARK3-213ENST00000558611 GCP02774 474 aa13.33□□□□□ -0.28
MARK3-213ENST00000558611 VPS72Q15906 364 aa13.33□□□□□ -0.28
MARK3-213ENST00000558611 PI16Q6UXB8 463 aa13.33□□□□□ -0.28
MARK3-213ENST00000558611 RNF166Q96A37 237 aaPredicted RBP13.33□□□□□ -0.28
MARK3-213ENST00000558611 RTCBQ9Y3I0 505 aaKnown RBP13.33□□□□□ -0.28
MARK3-213ENST00000558611 PHACTR2O75167 634 aa13.32□□□□□ -0.28
MARK3-213ENST00000558611 FOXC1Q12948 553 aa13.32□□□□□ -0.28
MARK3-213ENST00000558611 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
MARK3-213ENST00000558611 HSH2DQ96JZ2 352 aa13.32□□□□□ -0.28
MARK3-213ENST00000558611 TSEN34Q9BSV6 310 aaKnown RBP13.32□□□□□ -0.28
MARK3-213ENST00000558611 KCNMB2Q9Y691 235 aa13.32□□□□□ -0.28
MARK3-213ENST00000558611 OVOS2A0A0J9YW53 1432 aa13.31□□□□□ -0.28
MARK3-213ENST00000558611 OVOS2Q6IE36 1432 aa13.31□□□□□ -0.28
MARK3-213ENST00000558611 HSPA5P11021 654 aaKnown RBP13.31□□□□□ -0.28
MARK3-213ENST00000558611 IRS1P35568 1242 aa13.31□□□□□ -0.28
MARK3-213ENST00000558611 TRIP4Q15650 581 aaPredicted RBP13.31□□□□□ -0.28
MARK3-213ENST00000558611 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
MARK3-213ENST00000558611 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
MARK3-213ENST00000558611 BTLAQ7Z6A9 289 aa13.31□□□□□ -0.28
MARK3-213ENST00000558611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
MARK3-213ENST00000558611 ELP3Q9H9T3 547 aa13.31□□□□□ -0.28
MARK3-213ENST00000558611 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
MARK3-213ENST00000558611 COL5A2P05997 1499 aaPredicted RBP13.3□□□□□ -0.28
MARK3-213ENST00000558611 SPINT1O43278 529 aa13.3□□□□□ -0.28
MARK3-213ENST00000558611 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
MARK3-213ENST00000558611 WDR44Q5JSH3 913 aa13.3□□□□□ -0.28
MARK3-213ENST00000558611 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
MARK3-213ENST00000558611 NME9Q86XW9 330 aa13.3□□□□□ -0.28
MARK3-213ENST00000558611 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
MARK3-213ENST00000558611 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
MARK3-213ENST00000558611 POTECB2RU33 542 aa13.29□□□□□ -0.28
MARK3-213ENST00000558611 J3QL48 77 aa13.29□□□□□ -0.28
MARK3-213ENST00000558611 GJA8P48165 433 aa13.29□□□□□ -0.28
MARK3-213ENST00000558611 MEI1Q5TIA1 1274 aa13.29□□□□□ -0.28
MARK3-213ENST00000558611 CMTR1Q8N1G2 835 aaKnown RBP13.29□□□□□ -0.28
MARK3-213ENST00000558611 INSM2Q96T92 566 aaPredicted RBP13.29□□□□□ -0.28
MARK3-213ENST00000558611 NEUROD4Q9HD90 331 aa13.29□□□□□ -0.28
MARK3-213ENST00000558611 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
MARK3-213ENST00000558611 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
MARK3-213ENST00000558611 RGPD2P0DJD1 1756 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 TTC24A2A3L6 582 aaPredicted RBP13.28□□□□□ -0.28
MARK3-213ENST00000558611 ATP4AP20648 1035 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 PHKA2P46019 1235 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 ERMP1Q7Z2K6 904 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 GALNT12Q8IXK2 581 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 NPHS2Q9NP85 383 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 USP20Q9Y2K6 914 aa13.28□□□□□ -0.28
MARK3-213ENST00000558611 EPB42P16452 691 aa13.27□□□□□ -0.29
MARK3-213ENST00000558611 NCLP19338 710 aaKnown RBP13.27□□□□□ -0.29
MARK3-213ENST00000558611 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.29
MARK3-213ENST00000558611 C11orf16Q9NQ32 467 aa13.27□□□□□ -0.29
MARK3-213ENST00000558611 TMEM63CQ9P1W3 806 aa13.27□□□□□ -0.29
MARK3-213ENST00000558611 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.29
MARK3-213ENST00000558611 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.29
MARK3-213ENST00000558611 MCF2L2Q86YR7 1114 aa13.26□□□□□ -0.29
MARK3-213ENST00000558611 ZIC5Q96T25 663 aa13.26□□□□□ -0.29
MARK3-213ENST00000558611 BCO2Q9BYV7 579 aa13.26□□□□□ -0.29
MARK3-213ENST00000558611 POLMQ9NP87 494 aaPredicted RBP13.26□□□□□ -0.29
MARK3-213ENST00000558611 LRRC37A3O60309 1634 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 NSD3Q9BZ95 1437 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 SPATA31A1Q5TZJ5 1347 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 FGRP09769 529 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 NXPE4Q6UWF7 544 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 CYP4X1Q8N118 509 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 CHRDQ9H2X0 955 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
MARK3-213ENST00000558611 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
MARK3-213ENST00000558611 EGFRP00533 1210 aa13.24□□□□□ -0.29
MARK3-213ENST00000558611 SUV39H2Q9H5I1 410 aa13.24□□□□□ -0.29
MARK3-213ENST00000558611 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
MARK3-213ENST00000558611 SBF2Q86WG5 1849 aa13.24□□□□□ -0.29
MARK3-213ENST00000558611 CRB1P82279 1406 aa13.23□□□□□ -0.29
MARK3-213ENST00000558611 PEAK1Q9H792 1746 aa13.23□□□□□ -0.29
MARK3-213ENST00000558611 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
MARK3-213ENST00000558611 ATF4P18848 351 aaPredicted RBP13.23□□□□□ -0.29
MARK3-213ENST00000558611 EVA1CP58658 441 aa13.23□□□□□ -0.29
MARK3-213ENST00000558611 POU4F2Q12837 409 aa13.23□□□□□ -0.29
MARK3-213ENST00000558611 PAK2Q13177 524 aa13.23□□□□□ -0.29
MARK3-213ENST00000558611 NOC4LQ9BVI4 516 aaKnown RBP13.23□□□□□ -0.29
MARK3-213ENST00000558611 TOR4AQ9NXH8 423 aa13.23□□□□□ -0.29
MARK3-213ENST00000558611 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms