RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ABCF2Q9UG63 623 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 DENND2AQ9ULE3 1009 aa19.28■□□□□ 0.68
TPM1-211ENST00000558314 MYH13Q9UKX3 1938 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 ECM2O94769 699 aaPredicted RBP19.27■□□□□ 0.68
TPM1-211ENST00000558314 TFCP2Q12800 502 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 CCDC102BQ68D86 513 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 INTS3Q68E01 1043 aaKnown RBP19.27■□□□□ 0.68
TPM1-211ENST00000558314 OTOP1Q7RTM1 612 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 MS4A4AQ96JQ5 239 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 NEUROD6Q96NK8 337 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 ZNF341Q9BYN7 854 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 COPRSQ9NQ92 184 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 SNCAIPQ9Y6H5 919 aa19.27■□□□□ 0.68
TPM1-211ENST00000558314 SP3Q02447 781 aa19.26■□□□□ 0.67
TPM1-211ENST00000558314 NFIAQ12857 509 aa19.26■□□□□ 0.67
TPM1-211ENST00000558314 ARHGAP45Q92619 1136 aa19.26■□□□□ 0.67
TPM1-211ENST00000558314 ZFYVE28Q9HCC9 887 aa19.26■□□□□ 0.67
TPM1-211ENST00000558314 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
TPM1-211ENST00000558314 TRIM27P14373 513 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 INPP5BP32019 993 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 GORABQ5T7V8 394 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 ERO1BQ86YB8 467 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 DZIP1Q86YF9 867 aaKnown RBP19.25■□□□□ 0.67
TPM1-211ENST00000558314 FAM43AQ8N2R8 423 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 FAM151AQ8WW52 585 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 EFCC1Q9HA90 598 aa19.25■□□□□ 0.67
TPM1-211ENST00000558314 A0A1B0GUL7 405 aa19.24■□□□□ 0.67
TPM1-211ENST00000558314 SPDYE5A6NIY4 337 aa19.24■□□□□ 0.67
TPM1-211ENST00000558314 SEMA3EO15041 775 aa19.24■□□□□ 0.67
TPM1-211ENST00000558314 WDHD1O75717 1129 aaPredicted RBP19.24■□□□□ 0.67
TPM1-211ENST00000558314 HNRNPUQ00839 825 aaKnown RBP eCLIP19.24■□□□□ 0.67
TPM1-211ENST00000558314 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
TPM1-211ENST00000558314 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
TPM1-211ENST00000558314 IRF6O14896 467 aa19.23■□□□□ 0.67
TPM1-211ENST00000558314 GNAI2P04899 355 aa19.23■□□□□ 0.67
TPM1-211ENST00000558314 CETPP11597 493 aa19.23■□□□□ 0.67
TPM1-211ENST00000558314 SNAPC2Q13487 334 aa19.23■□□□□ 0.67
TPM1-211ENST00000558314 RASGRF1Q13972 1273 aa19.23■□□□□ 0.67
TPM1-211ENST00000558314 XAGE2Q96GT9 111 aa19.23■□□□□ 0.67
TPM1-211ENST00000558314 AKAP2Q9Y2D5 859 aa19.23■□□□□ 0.67
TPM1-211ENST00000558314 AK9Q5TCS8 1911 aa19.22■□□□□ 0.67
TPM1-211ENST00000558314 G3BP1Q13283 466 aaKnown RBP eCLIP19.22■□□□□ 0.67
TPM1-211ENST00000558314 ZFPM1Q8IX07 1006 aa19.22■□□□□ 0.67
TPM1-211ENST00000558314 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
TPM1-211ENST00000558314 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.22■□□□□ 0.67
TPM1-211ENST00000558314 BTBD19C9JJ37 291 aa19.21■□□□□ 0.67
TPM1-211ENST00000558314 PICALMQ13492 652 aa19.21■□□□□ 0.67
TPM1-211ENST00000558314 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
TPM1-211ENST00000558314 MIER1Q8N108 512 aa19.21■□□□□ 0.67
TPM1-211ENST00000558314 FAM198AQ9UFP1 575 aa19.21■□□□□ 0.67
TPM1-211ENST00000558314 PTPN22Q9Y2R2 807 aa19.21■□□□□ 0.67
TPM1-211ENST00000558314 SALL1Q9NSC2 1324 aa19.21■□□□□ 0.67
TPM1-211ENST00000558314 RPAP1Q9BWH6 1393 aaPredicted RBP19.2■□□□□ 0.66
TPM1-211ENST00000558314 RGS3P49796 1198 aa19.2■□□□□ 0.66
TPM1-211ENST00000558314 PPIL2Q13356 520 aa19.2■□□□□ 0.66
TPM1-211ENST00000558314 OS9Q13438 667 aaPredicted RBP19.2■□□□□ 0.66
TPM1-211ENST00000558314 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
TPM1-211ENST00000558314 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
TPM1-211ENST00000558314 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.2■□□□□ 0.66
TPM1-211ENST00000558314 PNMA6EA0A0J9YXQ4 647 aa19.19■□□□□ 0.66
TPM1-211ENST00000558314 MYCP01106 439 aaPredicted RBP19.19■□□□□ 0.66
TPM1-211ENST00000558314 BTDP43251 543 aa19.19■□□□□ 0.66
TPM1-211ENST00000558314 CAP1Q01518 475 aa19.19■□□□□ 0.66
TPM1-211ENST00000558314 ZKSCAN2Q63HK3 967 aa19.19■□□□□ 0.66
TPM1-211ENST00000558314 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
TPM1-211ENST00000558314 SLF2Q8IX21 1173 aa19.19■□□□□ 0.66
TPM1-211ENST00000558314 PPATQ06203 517 aa19.18■□□□□ 0.66
TPM1-211ENST00000558314 ARHGEF6Q15052 776 aa19.18■□□□□ 0.66
TPM1-211ENST00000558314 PI16Q6UXB8 463 aa19.18■□□□□ 0.66
TPM1-211ENST00000558314 TBC1D9Q6ZT07 1266 aa19.18■□□□□ 0.66
TPM1-211ENST00000558314 FTSJ3Q8IY81 847 aaKnown RBP19.18■□□□□ 0.66
TPM1-211ENST00000558314 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
TPM1-211ENST00000558314 RAI14Q9P0K7 980 aa19.18■□□□□ 0.66
TPM1-211ENST00000558314 MTX1Q13505 466 aa19.17■□□□□ 0.66
TPM1-211ENST00000558314 KIF22Q14807 665 aa19.17■□□□□ 0.66
TPM1-211ENST00000558314 POTEFA5A3E0 1075 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 MECOMQ03112 1051 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
TPM1-211ENST00000558314 ARHGAP39Q9C0H5 1083 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 PICK1Q9NRD5 415 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 HMG20BQ9P0W2 317 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 CPA4Q9UI42 421 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 MROH7-TTC4A0A0A0MT08 1334 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 LAMB1P07942 1786 aa19.16■□□□□ 0.66
TPM1-211ENST00000558314 PDHXO00330 501 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 TLR2O60603 784 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 ITPRIPQ8IWB1 547 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 SPATA5Q8NB90 893 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
TPM1-211ENST00000558314 SNRKQ9NRH2 765 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 PTCH2Q9Y6C5 1203 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 GAKO14976 1311 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 MYH2Q9UKX2 1941 aa19.15■□□□□ 0.66
TPM1-211ENST00000558314 DDTLA6NHG4 134 aaPredicted RBP19.14■□□□□ 0.65
TPM1-211ENST00000558314 ENTPD3O75355 529 aa19.14■□□□□ 0.65
TPM1-211ENST00000558314 SLC9C1Q4G0N8 1177 aa19.14■□□□□ 0.65
TPM1-211ENST00000558314 IDI2Q9BXS1 227 aa19.14■□□□□ 0.65
TPM1-211ENST00000558314 LRP2BPQ9P2M1 347 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms