RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 OPHN1O60890 802 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 THUMPD2Q9BTF0 503 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 F6X3S4 739 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 ASIC1P78348 528 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 DYNC1I2Q13409 638 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 SLFNL1Q499Z3 407 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 SCOCQ9UIL1 159 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 FLOT1O75955 427 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 STX17P56962 302 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 KRT23Q9C075 422 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
CSPG4P12-201ENST00000558282 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 CEP104O60308 925 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 TBCAO75347 108 aaKnown RBP13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 GMNNO75496 209 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 HHATQ5VTY9 493 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 TSC22D3Q99576 134 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 TROVE2P10155 538 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 CHMLP26374 656 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 ZBTB9Q96C00 473 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 RANBP6O60518 1105 aaKnown RBP13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 IRX1P78414 480 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 RAB17Q9H0T7 212 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 PHLPP2Q6ZVD8 1323 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 ABCC5O15440 1437 aa13.15□□□□□ -0.3
CSPG4P12-201ENST00000558282 MYL6BP14649 208 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 MKNK2Q9HBH9 465 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 DENND2CQ68D51 928 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 A0A1B0GVL5 298 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCDC197Q8NCU1 140 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 ARMC2Q8NEN0 867 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 RGS16O15492 202 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 TRIM58Q8NG06 486 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 RPRD2Q5VT52 1461 aaKnown RBP13.14□□□□□ -0.31
CSPG4P12-201ENST00000558282 CTNNA1P35221 906 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 GSDMBQ8TAX9 411 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 PPP2R2CQ9Y2T4 447 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 RTN1Q16799 776 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 TSHZ3Q63HK5 1081 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 BICDL1Q6ZP65 573 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 DHX32Q7L7V1 743 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 SYCP3Q8IZU3 236 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 TXNDC16Q9P2K2 825 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 WTAPQ15007 396 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 TEX2Q8IWB9 1127 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 XPO4Q9C0E2 1151 aaKnown RBP13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 CDC23Q9UJX2 597 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 SKIP12755 728 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 STX2P32856 288 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 KRT9P35527 623 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
CSPG4P12-201ENST00000558282 SUN1O94901 812 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 GUCY2CP25092 1073 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 SYCE1Q8N0S2 351 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 PYCARDQ9ULZ3 195 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 I3L4J1 428 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 MGEA5O60502 916 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 CALML3P27482 149 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 CABP4P57796 275 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 INF2Q27J81 1249 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 MCM10Q7L590 875 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 INSRP06213 1382 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 TCP1P17987 556 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 IFT88Q13099 833 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 BIRC2Q13490 618 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 UBL4BQ8N7F7 174 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 CUL5Q93034 780 aa13.12□□□□□ -0.31
CSPG4P12-201ENST00000558282 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms