RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SUPT20HL1Q3ZLR7 823 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 HHIPL2Q6UWX4 724 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 ARMC9Q7Z3E5 817 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 TNS4Q8IZW8 715 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 TEPSINQ96N21 525 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 DENND2AQ9ULE3 1009 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 ANGEL1Q9UNK9 670 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 AKAP2Q9Y2D5 859 aa10.87□□□□□ -0.67
SNRPA1-206ENST00000558059 MAST3O60307 1309 aa10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 SALL1Q9NSC2 1324 aa10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 TCP10L2B9ZVM9 353 aa10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 PRDX5P30044 214 aa10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 TNFAIP1Q13829 316 aa10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 RASGRF1Q13972 1273 aa10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 CDAN1Q8IWY9 1227 aa10.86□□□□□ -0.67
SNRPA1-206ENST00000558059 PPP1R12BO60237 982 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 CACNB3P54284 484 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 MVPQ14764 893 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 FKBP1CQ5VVH2 108 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 KIF12Q96FN5 646 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 NEUROD6Q96NK8 337 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 TMEM39BQ9GZU3 492 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 RNF186Q9NXI6 227 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 RCAN3Q9UKA8 241 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 NOP58Q9Y2X3 529 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 DAGLAQ9Y4D2 1042 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 AK9Q5TCS8 1911 aa10.85□□□□□ -0.67
SNRPA1-206ENST00000558059 PDS5AQ29RF7 1337 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 UNCXA6NJT0 531 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 SURF6O75683 361 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 LDHBP07195 334 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 MS4A1P11836 297 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 TNNI2P48788 182 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 CEP85Q6P2H3 762 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 FAM83AQ86UY5 434 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 CLMNQ96JQ2 1002 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 GPR108Q9NPR9 543 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 SAGE1Q9NXZ1 904 aa10.84□□□□□ -0.67
SNRPA1-206ENST00000558059 OTOFQ9HC10 1997 aa10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 TRPA1O75762 1119 aa10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 IREB2P48200 963 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 TM4SF4P48230 202 aa10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 MKRN3Q13064 507 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 SPRYD7Q5W111 196 aa10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 CDC42EP5Q6NZY7 148 aa10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 ZGPATQ8N5A5 531 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 SLC10A4Q96EP9 437 aa10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 HMG20BQ9P0W2 317 aa10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 MYO5AQ9Y4I1 1855 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-206ENST00000558059 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 OS9Q13438 667 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 TNNI3KQ59H18 835 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 GORABQ5T7V8 394 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 PI16Q6UXB8 463 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 FAM163AQ96GL9 167 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 WNK4Q96J92 1243 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 ZBTB40Q9NUA8 1239 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 TMOD2Q9NZR1 351 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 ABCF2Q9UG63 623 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 FPGT-TNNI3KV9GXZ4 949 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 LAMB1P07942 1786 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 GAKO14976 1311 aa10.82□□□□□ -0.68
SNRPA1-206ENST00000558059 GJA5P36382 358 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 MCAMP43121 646 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 NFIAQ12857 509 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 LCE2DQ5TA82 110 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 SPTY2D1Q68D10 685 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 MAMSTRQ6ZN01 415 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 TBC1D9Q6ZT07 1266 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 ANKRD13AQ8IZ07 590 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 SPATA5Q8NB90 893 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 ZNF384Q8TF68 577 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 FAM151AQ8WW52 585 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 DBNDD2Q9BQY9 259 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 BMP2KQ9NSY1 1161 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 USP40Q9NVE5 1235 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 FAM198AQ9UFP1 575 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 DDX19BQ9UMR2 479 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
SNRPA1-206ENST00000558059 RPAP1Q9BWH6 1393 aaPredicted RBP10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 UQCRFS1P1P0C7P4 283 aa10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 ZBTB48P10074 688 aaPredicted RBP10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 MAP3K9P80192 1104 aa10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 MECOMQ03112 1051 aa10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 C20orf194Q5TEA3 1177 aa10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 ERICH6Q7L0X2 663 aa10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 DZIP1Q86YF9 867 aaKnown RBP10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 SIRT2Q8IXJ6 389 aa10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 EAF2Q96CJ1 260 aaPredicted RBP10.8□□□□□ -0.68
SNRPA1-206ENST00000558059 MANSC4A6NHS7 340 aaPredicted RBP10.79□□□□□ -0.68
SNRPA1-206ENST00000558059 SREBF2Q12772 1141 aa10.79□□□□□ -0.68
SNRPA1-206ENST00000558059 TCP10Q12799 353 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms