RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
SNRPA1-204ENST00000558020 SNAPC2Q13487 334 aa16.87■□□□□ 0.29
SNRPA1-204ENST00000558020 SPTY2D1Q68D10 685 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-204ENST00000558020 OTOP1Q7RTM1 612 aa16.87■□□□□ 0.29
SNRPA1-204ENST00000558020 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
SNRPA1-204ENST00000558020 TAF1CQ15572 869 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 CCDC102BQ68D86 513 aa16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 CDC42EP5Q6NZY7 148 aa16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 BRI3BPQ8WY22 251 aa16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 ZKSCAN4Q969J2 545 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 ZCCHC17Q9NP64 241 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 USP40Q9NVE5 1235 aa16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 RPAP1Q9BWH6 1393 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-204ENST00000558020 LAMB1P07942 1786 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 PRDX5P30044 214 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 PHKA1P46020 1223 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 TIMM10P62072 90 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 PPATQ06203 517 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 TCP10Q12799 353 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 PPIL2Q13356 520 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 MVPQ14764 893 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 DIXDC1Q155Q3 683 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 MIGA2Q7L4E1 593 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 FRAT1Q92837 279 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 SNCAIPQ9Y6H5 919 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 MYH13Q9UKX3 1938 aa16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 TNRC18O15417 2968 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-204ENST00000558020 GNAI2P04899 355 aa16.84■□□□□ 0.29
SNRPA1-204ENST00000558020 MTX1Q13505 466 aa16.84■□□□□ 0.29
SNRPA1-204ENST00000558020 KIF22Q14807 665 aa16.84■□□□□ 0.29
SNRPA1-204ENST00000558020 GORABQ5T7V8 394 aa16.84■□□□□ 0.29
SNRPA1-204ENST00000558020 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
SNRPA1-204ENST00000558020 DZIP1Q86YF9 867 aaKnown RBP16.84■□□□□ 0.29
SNRPA1-204ENST00000558020 PTPN22Q9Y2R2 807 aa16.84■□□□□ 0.29
SNRPA1-204ENST00000558020 IRF6O14896 467 aa16.83■□□□□ 0.28
SNRPA1-204ENST00000558020 PDS5AQ29RF7 1337 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-204ENST00000558020 NEUROD6Q96NK8 337 aa16.83■□□□□ 0.28
SNRPA1-204ENST00000558020 ABCF2Q9UG63 623 aa16.83■□□□□ 0.28
SNRPA1-204ENST00000558020 OTOFQ9HC10 1997 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 A0A1B0GUL7 405 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 ADORA1P30542 326 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 TFCP2Q12800 502 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 NBPF11Q86T75 865 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 FAM43AQ8N2R8 423 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 XAGE2Q96GT9 111 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
SNRPA1-204ENST00000558020 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
SNRPA1-204ENST00000558020 TLR2O60603 784 aa16.81■□□□□ 0.28
SNRPA1-204ENST00000558020 ENTPD3O75355 529 aa16.81■□□□□ 0.28
SNRPA1-204ENST00000558020 TRIM27P14373 513 aa16.81■□□□□ 0.28
SNRPA1-204ENST00000558020 ZSCAN29Q8IWY8 852 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-204ENST00000558020 FAM163AQ96GL9 167 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-204ENST00000558020 PDE4DIPQ5VU43 2346 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 BTBD19C9JJ37 291 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 BCAR3O75815 825 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 GNRH1P01148 92 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 LDHCP07864 332 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 INPP5BP32019 993 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 GSTO1P78417 241 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 NFIAQ12857 509 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 RASGRF1Q13972 1273 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 ZKSCAN2Q63HK3 967 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 IDI2Q9BXS1 227 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
SNRPA1-204ENST00000558020 RGS3P49796 1198 aa16.79■□□□□ 0.28
SNRPA1-204ENST00000558020 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.79■□□□□ 0.28
SNRPA1-204ENST00000558020 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
SNRPA1-204ENST00000558020 PICK1Q9NRD5 415 aa16.79■□□□□ 0.28
SNRPA1-204ENST00000558020 GAKO14976 1311 aa16.78■□□□□ 0.28
SNRPA1-204ENST00000558020 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
SNRPA1-204ENST00000558020 NOL9Q5SY16 702 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-204ENST00000558020 ANKRD23Q86SG2 305 aa16.78■□□□□ 0.28
SNRPA1-204ENST00000558020 ARMC5Q96C12 935 aa16.78■□□□□ 0.28
SNRPA1-204ENST00000558020 TMEM106CQ9BVX2 250 aa16.78■□□□□ 0.28
SNRPA1-204ENST00000558020 CXCL11O14625 94 aa16.77■□□□□ 0.28
SNRPA1-204ENST00000558020 UQCRFS1P1P0C7P4 283 aa16.77■□□□□ 0.28
SNRPA1-204ENST00000558020 PRMT2P55345 433 aa16.77■□□□□ 0.28
SNRPA1-204ENST00000558020 SLC9C1Q4G0N8 1177 aa16.77■□□□□ 0.28
SNRPA1-204ENST00000558020 PRPF38BQ5VTL8 546 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-204ENST00000558020 SPATA5Q8NB90 893 aa16.77■□□□□ 0.28
SNRPA1-204ENST00000558020 KCNH4Q9UQ05 1017 aa16.77■□□□□ 0.28
SNRPA1-204ENST00000558020 PDHXO00330 501 aa16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 BTDP43251 543 aa16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 LACTBP83111 547 aaPredicted RBP16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 MECOMQ03112 1051 aa16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 FASTKD5Q7L8L6 764 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 ZFPM1Q8IX07 1006 aa16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 MYH2Q9UKX2 1941 aa16.76■□□□□ 0.27
SNRPA1-204ENST00000558020 MROH7-TTC4A0A0A0MT08 1334 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 GPR75-ASB3A0A0A6YYF3 556 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 HOXD10P28358 340 aa16.75■□□□□ 0.27
SNRPA1-204ENST00000558020 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms