RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 NDFIP2Q9NV92 336 aa9.97□□□□□ -0.81
SHC4-204ENST00000557797 PIM2Q9P1W9 311 aa9.97□□□□□ -0.81
SHC4-204ENST00000557797 RBM19Q9Y4C8 960 aaKnown RBP9.97□□□□□ -0.81
SHC4-204ENST00000557797 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.96□□□□□ -0.82
SHC4-204ENST00000557797 PSMA6P60900 246 aaKnown RBP9.96□□□□□ -0.82
SHC4-204ENST00000557797 SRSF11Q05519 484 aaKnown RBP9.96□□□□□ -0.82
SHC4-204ENST00000557797 DALRD3Q5D0E6 543 aaKnown RBP9.96□□□□□ -0.82
SHC4-204ENST00000557797 WHAMMQ8TF30 809 aa9.96□□□□□ -0.82
SHC4-204ENST00000557797 SMARCC1Q92922 1105 aaPredicted RBP9.96□□□□□ -0.82
SHC4-204ENST00000557797 TRERF1Q96PN7 1200 aa9.96□□□□□ -0.82
SHC4-204ENST00000557797 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
SHC4-204ENST00000557797 CCDC87Q9NVE4 849 aa9.96□□□□□ -0.82
SHC4-204ENST00000557797 SERPINA10Q9UK55 444 aa9.96□□□□□ -0.82
SHC4-204ENST00000557797 CGNL1Q0VF96 1302 aa9.96□□□□□ -0.82
SHC4-204ENST00000557797 A0A1W2PNR3 127 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 SERTM1A2A2V5 107 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 LGR5O75473 907 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 TATP17735 454 aaPredicted RBP9.95□□□□□ -0.82
SHC4-204ENST00000557797 NLGN1Q8N2Q7 840 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 IP6K1Q92551 441 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
SHC4-204ENST00000557797 CFHR5Q9BXR6 569 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 HCN2Q9UL51 889 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 KTN1Q86UP2 1357 aaKnown RBP9.95□□□□□ -0.82
SHC4-204ENST00000557797 CCDC88AQ3V6T2 1871 aa9.95□□□□□ -0.82
SHC4-204ENST00000557797 BNIP3LO60238 219 aa9.94□□□□□ -0.82
SHC4-204ENST00000557797 HIRAP54198 1017 aaPredicted RBP9.94□□□□□ -0.82
SHC4-204ENST00000557797 ZNF385CQ66K41 422 aaPredicted RBP9.94□□□□□ -0.82
SHC4-204ENST00000557797 NLRP8Q86W28 1048 aa9.94□□□□□ -0.82
SHC4-204ENST00000557797 LINC00116Q8NCU8 138 aa9.94□□□□□ -0.82
SHC4-204ENST00000557797 ABHD17AQ96GS6 310 aa9.94□□□□□ -0.82
SHC4-204ENST00000557797 ZCCHC2Q9C0B9 1178 aaKnown RBP9.94□□□□□ -0.82
SHC4-204ENST00000557797 ZNF232Q9UNY5 417 aa9.94□□□□□ -0.82
SHC4-204ENST00000557797 EVC2Q86UK5 1308 aa9.93□□□□□ -0.82
SHC4-204ENST00000557797 LMNB1P20700 586 aa9.93□□□□□ -0.82
SHC4-204ENST00000557797 TMF1P82094 1093 aa9.93□□□□□ -0.82
SHC4-204ENST00000557797 ARSJQ5FYB0 599 aaPredicted RBP9.93□□□□□ -0.82
SHC4-204ENST00000557797 SCG3Q8WXD2 468 aaKnown RBP9.93□□□□□ -0.82
SHC4-204ENST00000557797 ZMIZ1Q9ULJ6 1067 aa9.93□□□□□ -0.82
SHC4-204ENST00000557797 SBNO2Q9Y2G9 1366 aa9.92□□□□□ -0.82
SHC4-204ENST00000557797 PASKQ96RG2 1323 aa9.92□□□□□ -0.82
SHC4-204ENST00000557797 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
SHC4-204ENST00000557797 MX2P20592 715 aa9.92□□□□□ -0.82
SHC4-204ENST00000557797 MPRIPQ6WCQ1 1025 aa9.92□□□□□ -0.82
SHC4-204ENST00000557797 GAS2L2Q8NHY3 880 aa9.92□□□□□ -0.82
SHC4-204ENST00000557797 HINFPQ9BQA5 517 aa9.92□□□□□ -0.82
SHC4-204ENST00000557797 C2orf49Q9BVC5 232 aaPredicted RBP9.92□□□□□ -0.82
SHC4-204ENST00000557797 ATXN7L1Q9ULK2 861 aaPredicted RBP9.92□□□□□ -0.82
SHC4-204ENST00000557797 NOVA2Q9UNW9 492 aaKnown RBP9.92□□□□□ -0.82
SHC4-204ENST00000557797 THSD7BQ9C0I4 1608 aa9.92□□□□□ -0.82
SHC4-204ENST00000557797 DICER1Q9UPY3 1922 aaKnown RBP9.92□□□□□ -0.82
SHC4-204ENST00000557797 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 ZNF831Q5JPB2 1677 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 LOC102724428A0A0B4J2F2 783 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 SIK1P57059 783 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 NME9Q86XW9 330 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 STAG2Q8N3U4 1231 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 HCN4Q9Y3Q4 1203 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 PCDHGC4Q9Y5F7 938 aa9.91□□□□□ -0.82
SHC4-204ENST00000557797 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.82
SHC4-204ENST00000557797 PCDH11YQ9BZA8 1340 aa9.9□□□□□ -0.82
SHC4-204ENST00000557797 MAP2K1Q02750 393 aaPredicted RBP9.9□□□□□ -0.82
SHC4-204ENST00000557797 ELOAQ14241 798 aaKnown RBP9.9□□□□□ -0.82
SHC4-204ENST00000557797 FIGNL1Q6PIW4 674 aa9.9□□□□□ -0.82
SHC4-204ENST00000557797 LYPD4Q6UWN0 246 aa9.9□□□□□ -0.82
SHC4-204ENST00000557797 PHF24Q9UPV7 400 aa9.9□□□□□ -0.82
SHC4-204ENST00000557797 DLEC1Q9Y238 1755 aa9.9□□□□□ -0.82
SHC4-204ENST00000557797 RASSF10A6NK89 507 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 ATXN7O15265 892 aaPredicted RBP9.89□□□□□ -0.83
SHC4-204ENST00000557797 GYS1P13807 737 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 IGFBP4P22692 258 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 RASSF7Q02833 373 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 ITPK1Q13572 414 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 C1orf53Q5VUE5 145 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 BICDL1Q6ZP65 573 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.89□□□□□ -0.83
SHC4-204ENST00000557797 STK32AQ8WU08 396 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 PIGBQ92521 554 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
SHC4-204ENST00000557797 PHACTR1Q9C0D0 580 aa9.89□□□□□ -0.83
SHC4-204ENST00000557797 MAP3K19Q56UN5 1328 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 COL5A3P25940 1745 aaPredicted RBP9.88□□□□□ -0.83
SHC4-204ENST00000557797 TMEM88BA6NKF7 163 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 C2CD2LO14523 706 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 ATG7O95352 703 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 FGFR3P22607 806 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 WEE1P30291 646 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 TNP2Q05952 138 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 TRAPPC3LQ5T215 181 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 SVOPQ8N4V2 548 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 ACDQ96AP0 544 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 CHMP3Q9Y3E7 222 aa9.88□□□□□ -0.83
SHC4-204ENST00000557797 GPC6Q9Y625 555 aaPredicted RBP9.88□□□□□ -0.83
SHC4-204ENST00000557797 DCDC2BA2VCK2 349 aa9.87□□□□□ -0.83
SHC4-204ENST00000557797 ARHGEF15O94989 841 aa9.87□□□□□ -0.83
SHC4-204ENST00000557797 CELA2BP08218 269 aaPredicted RBP9.87□□□□□ -0.83
SHC4-204ENST00000557797 MAPTP10636 758 aaKnown RBP9.87□□□□□ -0.83
SHC4-204ENST00000557797 HOXC9P31274 260 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms