RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 TOMM70O94826 608 aa17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 CYP7A1P22680 504 aa17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 APPBP2Q92624 585 aa17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 DCPSQ96C86 337 aaKnown RBP17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
SUPT16H-208ENST00000557652 TCRBV5S4A2TA0A5A2 114 aa17.02■□□□□ 0.32
SUPT16H-208ENST00000557652 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
SUPT16H-208ENST00000557652 TNNI2P48788 182 aa17.02■□□□□ 0.32
SUPT16H-208ENST00000557652 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.32
SUPT16H-208ENST00000557652 EAPPQ56P03 285 aaPredicted RBP17.02■□□□□ 0.32
SUPT16H-208ENST00000557652 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
SUPT16H-208ENST00000557652 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.32
SUPT16H-208ENST00000557652 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 BTDP43251 543 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 FSTL1Q12841 308 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 NBPF9Q3BBW0 867 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 IDI2Q9BXS1 227 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 MYH1P12882 1939 aa17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
SUPT16H-208ENST00000557652 COL2A1P02458 1487 aaPredicted RBP17■□□□□ 0.31
SUPT16H-208ENST00000557652 EGFRP00533 1210 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 SULF1Q8IWU6 871 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 RILPL2Q969X0 211 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 HELLSQ9NRZ9 838 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 GGA3Q9NZ52 723 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 ZNF70Q9UC06 446 aaPredicted RBP17■□□□□ 0.31
SUPT16H-208ENST00000557652 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
SUPT16H-208ENST00000557652 MAGEB6P1A0A0J9YX57 407 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 ENTPD3O75355 529 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 GSPT1P15170 499 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 GNAT2P19087 354 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 SDSP20132 328 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 RGS3P49796 1198 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
SUPT16H-208ENST00000557652 RHBDL3P58872 404 aa16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 RUFY2Q8WXA3 655 aa16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 AIDAQ96BJ3 306 aa16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 RIOK1Q9BRS2 568 aaKnown RBP16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 TDRD3Q9H7E2 651 aaKnown RBP16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 DIAPH3Q9NSV4 1193 aa16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 AATFQ9NY61 560 aaKnown RBP eCLIP16.98■□□□□ 0.31
SUPT16H-208ENST00000557652 RAD50Q92878 1312 aa16.97■□□□□ 0.31
SUPT16H-208ENST00000557652 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
SUPT16H-208ENST00000557652 GIMAP6Q6P9H5 292 aa16.97■□□□□ 0.31
SUPT16H-208ENST00000557652 KRT26Q7Z3Y9 468 aa16.97■□□□□ 0.31
SUPT16H-208ENST00000557652 ADGRA1Q86SQ6 560 aa16.97■□□□□ 0.31
SUPT16H-208ENST00000557652 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
SUPT16H-208ENST00000557652 TEX11Q8IYF3 940 aa16.96■□□□□ 0.31
SUPT16H-208ENST00000557652 FAM151AQ8WW52 585 aa16.96■□□□□ 0.31
SUPT16H-208ENST00000557652 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
SUPT16H-208ENST00000557652 DHX36Q9H2U1 1008 aaKnown RBP16.96■□□□□ 0.31
SUPT16H-208ENST00000557652 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
SUPT16H-208ENST00000557652 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.31
SUPT16H-208ENST00000557652 ATRNL1Q5VV63 1379 aa16.95■□□□□ 0.3
SUPT16H-208ENST00000557652 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
SUPT16H-208ENST00000557652 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
SUPT16H-208ENST00000557652 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
SUPT16H-208ENST00000557652 DEFB129Q9H1M3 183 aa16.95■□□□□ 0.3
SUPT16H-208ENST00000557652 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 DDX60LQ5H9U9 1706 aaKnown RBP16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 CLRN2A0PK11 232 aa16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 NF2P35240 595 aa16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 SUPT20HL1Q3ZLR7 823 aa16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 MIGA1Q8NAN2 632 aa16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 OSBP2Q969R2 916 aa16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 PUS7LQ9H0K6 701 aaKnown RBP16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 PCDHAC2Q9Y5I4 1007 aa16.94■□□□□ 0.3
SUPT16H-208ENST00000557652 GPAA1O43292 621 aa16.93■□□□□ 0.3
SUPT16H-208ENST00000557652 MBD4O95243 580 aa16.93■□□□□ 0.3
SUPT16H-208ENST00000557652 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
SUPT16H-208ENST00000557652 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
SUPT16H-208ENST00000557652 SH3RF3Q8TEJ3 882 aaPredicted RBP16.93■□□□□ 0.3
SUPT16H-208ENST00000557652 STRBPQ96SI9 672 aaKnown RBP16.93■□□□□ 0.3
SUPT16H-208ENST00000557652 MYH8P13535 1937 aa16.93■□□□□ 0.3
SUPT16H-208ENST00000557652 UNCXA6NJT0 531 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 CDC45O75419 566 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 CHMLP26374 656 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 USP5P45974 858 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 FKBP1BP68106 108 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 RASA3Q14644 834 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 MAP1SQ66K74 1059 aaPredicted RBP16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 AMOTL1Q8IY63 956 aa16.92■□□□□ 0.3
SUPT16H-208ENST00000557652 LCORLQ8N3X6 602 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms