RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 NOC4LQ9BVI4 516 aaKnown RBP6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 OXCT2Q9BYC2 517 aaPredicted RBP6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 ABI2Q9NYB9 513 aaPredicted RBP6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 ATP10BO94823 1461 aa6.97□□□□□ -1.29
MTHFD1-216ENST00000557539 UNC13BO14795 1591 aa6.96□□□□□ -1.29
MTHFD1-216ENST00000557539 SHISA8B8ZZ34 492 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 CES1P23141 567 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 GRNP28799 593 aaKnown RBP6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 GBP2P32456 591 aaPredicted RBP6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 CTBSQ01459 385 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 PMEPA1Q969W9 287 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 CEP63Q96MT8 703 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 EHD4Q9H223 541 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 ZNF408Q9H9D4 720 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 ADAMTS1Q9UHI8 967 aa6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 ATXN7L1Q9ULK2 861 aaPredicted RBP6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 MRPL42Q9Y6G3 142 aaKnown RBP6.96□□□□□ -1.3
MTHFD1-216ENST00000557539 ITGB2P05107 769 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 FCGRTP55899 365 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 HTRA3P83110 453 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 TYRO3Q06418 890 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 PWP1Q13610 501 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 GPR162Q16538 588 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 EFHC2Q5JST6 749 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 NLRP13Q86W25 1043 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 PHF24Q9UPV7 400 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 TRAK1Q9UPV9 953 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 EFR3BQ9Y2G0 817 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 MRVI1Q9Y6F6 885 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 GJA3Q9Y6H8 435 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 IQGAP1P46940 1657 aa6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 GOLGB1Q14789 3259 aaKnown RBP6.95□□□□□ -1.3
MTHFD1-216ENST00000557539 ATRNO75882 1429 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 A0A1W2PP55 124 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 CLSTN1O94985 981 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 FGFR3P22607 806 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 EIF4A3P38919 411 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 SNRPNP63162 240 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 SUZ12Q15022 739 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 MAP3K11Q16584 847 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 KIAA0319Q5VV43 1072 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 NBPF6Q5VWK0 638 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 C3orf58Q8NDZ4 430 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 GLIS3Q8NEA6 775 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 ZNF526Q8TF50 670 aaPredicted RBP6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 NBPF4Q96M43 638 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 SYT17Q9BSW7 474 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 ZCCHC2Q9C0B9 1178 aaKnown RBP6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 LATS2Q9NRM7 1088 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 KANSL3Q9P2N6 904 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 AKAP2Q9Y2D5 859 aa6.94□□□□□ -1.3
MTHFD1-216ENST00000557539 SCAPERQ9BY12 1400 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 A0A1W2PNR3 127 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 CYP2E1P05181 493 aaPredicted RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 XRCC5P13010 732 aaKnown RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 HOXB4P17483 251 aaPredicted RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 ETFBP38117 255 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 SERINC3Q13530 473 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 EZH2Q15910 746 aaKnown RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 GPAT2Q6NUI2 795 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 ANKS3Q6ZW76 656 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 THEMISQ8N1K5 641 aaPredicted RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 BEND7Q8N7W2 519 aaPredicted RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 GALNT6Q8NCL4 622 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 ZNF296Q8WUU4 475 aaPredicted RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 EAF1Q96JC9 268 aaPredicted RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 DCAF5Q96JK2 942 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 TMEM74Q96NL1 305 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 MROH2AA6NES4 1674 aa6.93□□□□□ -1.3
MTHFD1-216ENST00000557539 ABCC1P33527 1531 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 PHF20L1A8MW92 1017 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 FBXO24O75426 580 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 EDN3P14138 238 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 NLRP8Q86W28 1048 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 CPLX3Q8WVH0 158 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 ABHD8Q96I13 439 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 GPATCH3Q96I76 525 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 SRPK1Q96SB4 655 aaKnown RBP6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 CHMP4AQ9BY43 222 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 TRIM55Q9BYV6 548 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 PCDHGC4Q9Y5F7 938 aa6.92□□□□□ -1.3
MTHFD1-216ENST00000557539 CFAP74Q9C0B2 1584 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 DEPDC5O75140 1603 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 U2SURPO15042 1029 aaKnown RBP6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 EGFRP00533 1210 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 BMP4P12644 408 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 HSD3B2P26439 372 aa6.91□□□□□ -1.3
MTHFD1-216ENST00000557539 FAM160A1Q05DH4 1040 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms