RNA–Protein interactions for RNA: ENST00000557399.1

LINC00645-203, long intergenic non-protein coding RNA 645, humanhuman

TSL 1 (best) BASIC

Gene LINC00645, Length 3,512 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00645-203ENST00000557399 TNFRSF25Q93038 417 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 TFIP11Q9UBB9 837 aaKnown RBP3.38□□□□□ -1.87
LINC00645-203ENST00000557399 DDX60LQ5H9U9 1706 aaKnown RBP3.38□□□□□ -1.87
LINC00645-203ENST00000557399 FOCADQ5VW36 1801 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 MAP3K6O95382 1288 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 HSPA1AP0DMV8 641 aaKnown RBP3.38□□□□□ -1.87
LINC00645-203ENST00000557399 HSPA1BP0DMV9 641 aaKnown RBP3.38□□□□□ -1.87
LINC00645-203ENST00000557399 MAP3K10Q02779 954 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 RNFT1Q5M7Z0 435 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 PRICKLE2Q7Z3G6 844 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 KRT28Q7Z3Y7 464 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 TCP11L2Q8N4U5 519 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 OGFOD1Q8N543 542 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 ACDQ96AP0 544 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 CNTNAP3BQ96NU0 1288 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 CNTNAP3Q9BZ76 1288 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 RBM19Q9Y4C8 960 aaKnown RBP3.38□□□□□ -1.87
LINC00645-203ENST00000557399 COL4A5P29400 1685 aa3.38□□□□□ -1.87
LINC00645-203ENST00000557399 A0A1W2PNR3 127 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 LYPD4Q6UWN0 246 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.37□□□□□ -1.87
LINC00645-203ENST00000557399 CLUAP1Q96AJ1 413 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 DCAF5Q96JK2 942 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 CALR3Q96L12 384 aaKnown RBP3.37□□□□□ -1.87
LINC00645-203ENST00000557399 ADAMTS8Q9UP79 889 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 DNMT3AQ9Y6K1 912 aaPredicted RBP3.37□□□□□ -1.87
LINC00645-203ENST00000557399 CASP8AP2Q9UKL3 1982 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 YBX3P16989 372 aaKnown RBP eCLIP3.37□□□□□ -1.87
LINC00645-203ENST00000557399 CAPN2P17655 700 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 ZNF468Q5VIY5 522 aaPredicted RBP3.37□□□□□ -1.87
LINC00645-203ENST00000557399 ABHD8Q96I13 439 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 PTCD1O75127 700 aaKnown RBP3.37□□□□□ -1.87
LINC00645-203ENST00000557399 PCSK7Q16549 785 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 ARHGEF25Q86VW2 580 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 PRO3102Q9H379 93 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 DMGDHQ9UI17 866 aaKnown RBP3.37□□□□□ -1.87
LINC00645-203ENST00000557399 SYNGAP1Q96PV0 1343 aa3.37□□□□□ -1.87
LINC00645-203ENST00000557399 OXCT2Q9BYC2 517 aaPredicted RBP3.36□□□□□ -1.87
LINC00645-203ENST00000557399 ZCCHC2Q9C0B9 1178 aaKnown RBP3.36□□□□□ -1.87
LINC00645-203ENST00000557399 GTF3C3Q9Y5Q9 886 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 DLG5Q8TDM6 1919 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 TTBK1Q5TCY1 1321 aaPredicted RBP3.36□□□□□ -1.87
LINC00645-203ENST00000557399 COL1A1P02452 1464 aaPredicted RBP3.36□□□□□ -1.87
LINC00645-203ENST00000557399 BNIP3LO60238 219 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 MX2P20592 715 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 PLA2G4AP47712 749 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 MARCH10Q8NA82 808 aaPredicted RBP3.36□□□□□ -1.87
LINC00645-203ENST00000557399 C21orf2O43822 256 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 RHOQP17081 205 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 KCNA3P22001 575 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 ZNF827Q17R98 1081 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 FAM200AQ8TCP9 573 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 PBXIP1Q96AQ6 731 aa3.36□□□□□ -1.87
LINC00645-203ENST00000557399 EPXP11678 715 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 HOXB4P17483 251 aaPredicted RBP3.35□□□□□ -1.87
LINC00645-203ENST00000557399 CTCFP49711 727 aaPredicted RBP3.35□□□□□ -1.87
LINC00645-203ENST00000557399 LINC00114Q6XXX2 140 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 RAB6BQ9NRW1 208 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 FAM13BQ9NYF5 915 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 FRRS1LQ9P0K9 344 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 LRRC37A2A6NM11 1700 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 CNTNAP4Q9C0A0 1308 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 TGFBR3LH3BV60 316 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 NPR3P17342 541 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 BEND7Q8N7W2 519 aaPredicted RBP3.35□□□□□ -1.87
LINC00645-203ENST00000557399 RHPN1Q8TCX5 695 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 L3MBTL2Q969R5 705 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 CABP1Q9NZU7 370 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 MARK1Q9P0L2 795 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 KIAA1024Q9UPX6 916 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 RASA1P20936 1047 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 ADH6P28332 368 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 VEGFBP49765 207 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 TGFB2P61812 414 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 DCAF11Q8TEB1 546 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 GTPBP3Q969Y2 492 aaKnown RBP3.35□□□□□ -1.87
LINC00645-203ENST00000557399 PGAP2Q9UHJ9 254 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 KCNH4Q9UQ05 1017 aa3.35□□□□□ -1.87
LINC00645-203ENST00000557399 MARSP56192 900 aaKnown RBP3.34□□□□□ -1.87
LINC00645-203ENST00000557399 C11orf91Q3C1V1 193 aa3.34□□□□□ -1.87
LINC00645-203ENST00000557399 TMEM151AQ8N4L1 468 aa3.34□□□□□ -1.87
LINC00645-203ENST00000557399 SUSD3Q96L08 255 aa3.34□□□□□ -1.87
LINC00645-203ENST00000557399 SRA1Q9HD15 236 aaKnown RBP3.34□□□□□ -1.87
LINC00645-203ENST00000557399 USTQ9Y2C2 406 aa3.34□□□□□ -1.87
LINC00645-203ENST00000557399 KLRG2A4D1S0 409 aaPredicted RBP3.34□□□□□ -1.87
LINC00645-203ENST00000557399 RPLP1P05386 114 aaKnown RBP3.34□□□□□ -1.87
LINC00645-203ENST00000557399 MAPTP10636 758 aaKnown RBP3.34□□□□□ -1.87
LINC00645-203ENST00000557399 TXLNAP40222 546 aa3.34□□□□□ -1.87
LINC00645-203ENST00000557399 TPCN2Q8NHX9 752 aa3.34□□□□□ -1.87
LINC00645-203ENST00000557399 GAS2L1Q99501 681 aaPredicted RBP3.34□□□□□ -1.87
LINC00645-203ENST00000557399 SERTAD1Q9UHV2 236 aa3.34□□□□□ -1.87
LINC00645-203ENST00000557399 CEMIPQ8WUJ3 1361 aa3.34□□□□□ -1.88
LINC00645-203ENST00000557399 RASSF10A6NK89 507 aa3.33□□□□□ -1.88
LINC00645-203ENST00000557399 C2CD2LO14523 706 aa3.33□□□□□ -1.88
LINC00645-203ENST00000557399 EPB42P16452 691 aa3.33□□□□□ -1.88
LINC00645-203ENST00000557399 NEUROD1Q13562 356 aa3.33□□□□□ -1.88
LINC00645-203ENST00000557399 USP3Q9Y6I4 520 aa3.33□□□□□ -1.88
LINC00645-203ENST00000557399 MYH3P11055 1940 aa3.33□□□□□ -1.88
LINC00645-203ENST00000557399 XKR5Q6UX68 686 aa3.33□□□□□ -1.88
LINC00645-203ENST00000557399 RIPOR1Q6ZS17 1223 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms