RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 A0A1W2PQ27 194 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 A0A1W2PQ64 194 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 A0A1W2PQD8 194 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 HIP1O00291 1037 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 STK3Q13188 491 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 MCM6Q14566 821 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 SRGAP1Q7Z6B7 1085 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 ACRBPQ8NEB7 543 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 MORC4Q8TE76 937 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 MRPS27Q92552 414 aaKnown RBP11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 ERCC4Q92889 916 aaPredicted RBP11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 DHX58Q96C10 678 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 TCEANC2Q96MN5 208 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 ZNF396Q96N95 335 aaPredicted RBP11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 MIS18AQ9NYP9 233 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 HMG20BQ9P0W2 317 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 KIF1AQ12756 1690 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 CBFA2T2O43439 604 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 ATP6V1AP38606 617 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 TUBB4BP68371 445 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 CEBPZQ03701 1054 aaKnown RBP11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 VSTM4Q8IW00 320 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 CNNM3Q8NE01 707 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 LLPHQ9BRT6 129 aaKnown RBP11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 UBA5Q9GZZ9 404 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 ARHGEF10LQ9HCE6 1279 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 ECHDC1Q9NTX5 307 aa11.99□□□□□ -0.49
SUPT16H-207ENST00000557394 CUTAO60888 179 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 ERLIN1O75477 346 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 CHMP4BP1P59074 171 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 DNAJC21Q5F1R6 531 aaKnown RBP11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 NUTM2GQ5VZR2 741 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 ERC1Q8IUD2 1116 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 COG3Q96JB2 828 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 SDF4Q9BRK5 362 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 IGSF5Q9NSI5 407 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 TAF6LQ9Y6J9 622 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 LTBP4Q8N2S1 1624 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 ACEP12821 1306 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 EXOC5O00471 708 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 ATF3P18847 181 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 MAP2K2P36507 400 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 ADALQ6DHV7 355 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 ANKRD20A12PQ8NF67 263 aa11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 CTDP1Q9Y5B0 961 aaPredicted RBP11.98□□□□□ -0.49
SUPT16H-207ENST00000557394 C1orf167Q5SNV9 1468 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 MST1RQ04912 1400 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 MYO1BO43795 1136 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 MCCD1P59942 119 aaPredicted RBP11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 TBX2Q13207 712 aaPredicted RBP11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 NMIQ13287 307 aaPredicted RBP11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 FAM227BQ96M60 508 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 PNKPQ96T60 521 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 PCDHA7Q9UN72 937 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 USP6P35125 1406 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 UBASH3AP57075 661 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 TUBB2AQ13885 445 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 SF3A1Q15459 793 aaKnown RBP11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 DPF2Q92785 391 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 TUBB2BQ9BVA1 445 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 ABCB6Q9NP58 842 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 KLHL42Q9P2K6 505 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 ANAPC4Q9UJX5 808 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 SUFUQ9UMX1 484 aa11.97□□□□□ -0.49
SUPT16H-207ENST00000557394 ANKRD65E5RJM6 399 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 STX10O60499 249 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 COQ9O75208 318 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 LMOD1P29536 600 aaPredicted RBP11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 ME1P48163 572 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 NDUFA8P51970 172 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 KRT32Q14532 448 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 CASP8Q14790 479 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 CEP112Q8N8E3 955 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 DNAAF4Q8WXU2 420 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 KAT2BQ92831 832 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 GPATCH3Q96I76 525 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 FAM210AQ96ND0 272 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 RTEL1Q9NZ71 1219 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
SUPT16H-207ENST00000557394 LRRC37A3O60309 1634 aa11.96□□□□□ -0.5
SUPT16H-207ENST00000557394 STK10O94804 968 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 TUBBP07437 444 aa11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 CLASRPQ8N2M8 674 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 MICALL1Q8N3F8 863 aa11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 NGDNQ8NEJ9 315 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 GBP3Q9H0R5 595 aa11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 AARSP49588 968 aaKnown RBP eCLIP11.95□□□□□ -0.58e-10■■■□□ 17.5
SUPT16H-207ENST00000557394 SCRN1Q12765 414 aa11.95□□□□□ -0.5
SUPT16H-207ENST00000557394 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms