RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	APOBEC3H	Q6NTF7	200 aa	Known RBP	14.04	□□□□□ -0.16
HNRNPC-231	ENST00000557336	FBXO46	Q6PJ61	603 aa	Predicted RBP	14.04	□□□□□ -0.16
HNRNPC-231	ENST00000557336	ATG9A	Q7Z3C6	839 aa		14.04	□□□□□ -0.16
HNRNPC-231	ENST00000557336	ANKRD13A	Q8IZ07	590 aa		14.04	□□□□□ -0.16
HNRNPC-231	ENST00000557336	RIOK3	O14730	519 aa	Known RBP	14.03	□□□□□ -0.16
HNRNPC-231	ENST00000557336	IREB2	P48200	963 aa	Known RBP	14.03	□□□□□ -0.16
HNRNPC-231	ENST00000557336	PSEN1	P49768	467 aa		14.03	□□□□□ -0.16
HNRNPC-231	ENST00000557336	HDLBP	Q00341	1268 aa	Known RBP	14.03	□□□□□ -0.16
HNRNPC-231	ENST00000557336	CRHR2	Q13324	411 aa		14.03	□□□□□ -0.16
HNRNPC-231	ENST00000557336	MRI	Q9BWK5	157 aa		14.03	□□□□□ -0.16
HNRNPC-231	ENST00000557336	ELP3	Q9H9T3	547 aa		14.03	□□□□□ -0.16
HNRNPC-231	ENST00000557336	OTOF	Q9HC10	1997 aa		14.02	□□□□□ -0.16
HNRNPC-231	ENST00000557336	ARAP2	Q8WZ64	1704 aa		14.02	□□□□□ -0.16
HNRNPC-231	ENST00000557336	KIF16B	Q96L93	1317 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	TNFAIP1	Q13829	316 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	VGLL4	Q14135	290 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	ALDH1L2	Q3SY69	923 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	OTOP1	Q7RTM1	612 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	BRI3BP	Q8WY22	251 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	OPTN	Q96CV9	577 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	ZDHHC15	Q96MV8	337 aa		14.02	□□□□□ -0.17
HNRNPC-231	ENST00000557336	EYA2	O00167	538 aa		14.01	□□□□□ -0.17
HNRNPC-231	ENST00000557336	PUM3	Q15397	648 aa	Known RBP	14.01	□□□□□ -0.17
HNRNPC-231	ENST00000557336	CAVIN4	Q5BKX8	364 aa		14.01	□□□□□ -0.17
HNRNPC-231	ENST00000557336	TBC1D22A	Q8WUA7	517 aa		14.01	□□□□□ -0.17
HNRNPC-231	ENST00000557336	MAP3K9	P80192	1104 aa		14	□□□□□ -0.17
HNRNPC-231	ENST00000557336	VPS37D	Q86XT2	251 aa		14	□□□□□ -0.17
HNRNPC-231	ENST00000557336	TEKT1	Q969V4	418 aa		14	□□□□□ -0.17
HNRNPC-231	ENST00000557336	TRIM17	Q9Y577	477 aa		14	□□□□□ -0.17
HNRNPC-231	ENST00000557336	FKBP1C	Q5VVH2	108 aa		13.99	□□□□□ -0.17
HNRNPC-231	ENST00000557336	FAM43A	Q8N2R8	423 aa		13.99	□□□□□ -0.17
HNRNPC-231	ENST00000557336	CD99L2	Q8TCZ2	262 aa		13.99	□□□□□ -0.17
HNRNPC-231	ENST00000557336	SUGT1	Q9Y2Z0	365 aa		13.99	□□□□□ -0.17
HNRNPC-231	ENST00000557336	SNCAIP	Q9Y6H5	919 aa		13.99	□□□□□ -0.17
HNRNPC-231	ENST00000557336	FRAT2	O75474	233 aa	Predicted RBP	13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	IFIT1	P09914	478 aa	Known RBP	13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	PDAP1	Q13442	181 aa	Known RBP	13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	HHIPL2	Q6UWX4	724 aa		13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	FAM83A	Q86UY5	434 aa		13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	LPIN2	Q92539	896 aa		13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	SMC4	Q9NTJ3	1288 aa		13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	NOB1	Q9ULX3	412 aa	Known RBP	13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	PTPN22	Q9Y2R2	807 aa		13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	KIAA0100	Q14667	2235 aa	Known RBP	13.98	□□□□□ -0.17
HNRNPC-231	ENST00000557336	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	CCL15-CCL14	A0A0B4J2E2	113 aa		13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	POTEF	A5A3E0	1075 aa		13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	SPDYE5	A6NIY4	337 aa		13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	TNNI2	P48788	182 aa		13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	CCL15	Q16663	113 aa		13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	OTUD5	Q96G74	571 aa		13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	ZFP91	Q96JP5	570 aa	Predicted RBP	13.97	□□□□□ -0.17
HNRNPC-231	ENST00000557336	CIAO1	O76071	339 aa		13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	PRDX5	P30044	214 aa		13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	SP3	Q02447	781 aa		13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	NFIA	Q12857	509 aa		13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	DIXDC1	Q155Q3	683 aa		13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	SIL1	Q9H173	461 aa		13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	PA2G4	Q9UQ80	394 aa	Known RBP	13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	DAGLA	Q9Y4D2	1042 aa		13.96	□□□□□ -0.17
HNRNPC-231	ENST00000557336	IRF6	O14896	467 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	UBTFL1	P0CB47	393 aa	Predicted RBP	13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	SLC5A1	P13866	664 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	PHKA1	P46020	1223 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	GTF2A2	P52657	109 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ATP2B3	Q16720	1220 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	OTUD7B	Q6GQQ9	843 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	CDC42EP5	Q6NZY7	148 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZFPM1	Q8IX07	1006 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	WDR66	Q8TBY9	1149 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ARMC5	Q96C12	935 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ERO1A	Q96HE7	468 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	WRNIP1	Q96S55	665 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	MEIS3	Q99687	375 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	FAM198A	Q9UFP1	575 aa		13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	LRRFIP2	Q9Y608	721 aa	Known RBP	13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.95	□□□□□ -0.18
HNRNPC-231	ENST00000557336	BTBD19	C9JJ37	291 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ADORA1	P30542	326 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	INPP5B	P32019	993 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	RARS	P54136	660 aa	Known RBP	13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	PRPF38B	Q5VTL8	546 aa	Known RBP	13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	MIGA2	Q7L4E1	593 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ERO1B	Q86YB8	467 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	FAM151A	Q8WW52	585 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	EFCC1	Q9HA90	598 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	COPRS	Q9NQ92	184 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	ZNF112	Q9UJU3	913 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	CSAD	Q9Y600	493 aa		13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.94	□□□□□ -0.18
HNRNPC-231	ENST00000557336	MAST3	O60307	1309 aa		13.93	□□□□□ -0.18
HNRNPC-231	ENST00000557336	CT47B1	P0C2W7	299 aa	Predicted RBP	13.93	□□□□□ -0.18
HNRNPC-231	ENST00000557336	MOGS	Q13724	837 aa		13.93	□□□□□ -0.18
HNRNPC-231	ENST00000557336	TAF1C	Q15572	869 aa	Predicted RBP	13.93	□□□□□ -0.18
HNRNPC-231	ENST00000557336	CEP126	Q9P2H0	1117 aa		13.93	□□□□□ -0.18
HNRNPC-231	ENST00000557336	SALL1	Q9NSC2	1324 aa		13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	IL15	P40933	162 aa	Predicted RBP	13.92	□□□□□ -0.18
HNRNPC-231	ENST00000557336	TIMM10	P62072	90 aa		13.92	□□□□□ -0.18

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