RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
LGMN-215ENST00000557315 FAM163AQ96GL9 167 aaPredicted RBP17.61■□□□□ 0.41
LGMN-215ENST00000557315 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
LGMN-215ENST00000557315 SUPT16HQ9Y5B9 1047 aaKnown RBP17.61■□□□□ 0.41
LGMN-215ENST00000557315 MYO1BO43795 1136 aa17.6■□□□□ 0.41
LGMN-215ENST00000557315 AOC2O75106 756 aa17.6■□□□□ 0.41
LGMN-215ENST00000557315 ADGRA1Q86SQ6 560 aa17.6■□□□□ 0.41
LGMN-215ENST00000557315 ANTXR1Q9H6X2 564 aa17.6■□□□□ 0.41
LGMN-215ENST00000557315 FAM198AQ9UFP1 575 aa17.6■□□□□ 0.41
LGMN-215ENST00000557315 PPP2R3BQ9Y5P8 575 aa17.6■□□□□ 0.41
LGMN-215ENST00000557315 SIPA1L1O43166 1804 aa17.6■□□□□ 0.41
LGMN-215ENST00000557315 MROH7-TTC4A0A0A0MT08 1334 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 UBE2Q2LH0YL09 131 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 ECE1P42892 770 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 RHBDL3P58872 404 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 CCDC158Q5M9N0 1113 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 ERICH6Q7L0X2 663 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 ZGPATQ8N5A5 531 aaKnown RBP17.59■□□□□ 0.41
LGMN-215ENST00000557315 C2orf69Q8N8R5 385 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
LGMN-215ENST00000557315 RPAP1Q9BWH6 1393 aaPredicted RBP17.58■□□□□ 0.4
LGMN-215ENST00000557315 MAP3K11Q16584 847 aa17.58■□□□□ 0.4
LGMN-215ENST00000557315 LDLRAD1Q5T700 205 aa17.58■□□□□ 0.4
LGMN-215ENST00000557315 FKBP1CQ5VVH2 108 aa17.58■□□□□ 0.4
LGMN-215ENST00000557315 ZFPM1Q8IX07 1006 aa17.58■□□□□ 0.4
LGMN-215ENST00000557315 MYH7P12883 1935 aa17.58■□□□□ 0.4
LGMN-215ENST00000557315 ATRNL1Q5VV63 1379 aa17.57■□□□□ 0.4
LGMN-215ENST00000557315 GPR75-ASB3A0A0A6YYF3 556 aa17.57■□□□□ 0.4
LGMN-215ENST00000557315 WDHD1O75717 1129 aaPredicted RBP17.57■□□□□ 0.4
LGMN-215ENST00000557315 FKBP1BP68106 108 aa17.57■□□□□ 0.4
LGMN-215ENST00000557315 PRKG1Q13976 671 aa17.57■□□□□ 0.4
LGMN-215ENST00000557315 RGMBQ6NW40 437 aa17.57■□□□□ 0.4
LGMN-215ENST00000557315 FAM83AQ86UY5 434 aa17.57■□□□□ 0.4
LGMN-215ENST00000557315 DZIP1Q86YF9 867 aaKnown RBP17.57■□□□□ 0.4
LGMN-215ENST00000557315 RASAL3Q86YV0 1011 aa17.57■□□□□ 0.4
LGMN-215ENST00000557315 CLASRPQ8N2M8 674 aaKnown RBP17.57■□□□□ 0.4
LGMN-215ENST00000557315 DDX4Q9NQI0 724 aaKnown RBP17.57■□□□□ 0.4
LGMN-215ENST00000557315 USP2O75604 605 aaPredicted RBP17.56■□□□□ 0.4
LGMN-215ENST00000557315 SLC10A3P09131 477 aa17.56■□□□□ 0.4
LGMN-215ENST00000557315 BTDP43251 543 aa17.56■□□□□ 0.4
LGMN-215ENST00000557315 LBX1P52954 281 aa17.56■□□□□ 0.4
LGMN-215ENST00000557315 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
LGMN-215ENST00000557315 EDC3Q96F86 508 aaKnown RBP17.56■□□□□ 0.4
LGMN-215ENST00000557315 LRRCC1Q9C099 1032 aa17.56■□□□□ 0.4
LGMN-215ENST00000557315 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
LGMN-215ENST00000557315 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
LGMN-215ENST00000557315 GRM1Q13255 1194 aa17.55■□□□□ 0.4
LGMN-215ENST00000557315 TNFAIP1Q13829 316 aa17.55■□□□□ 0.4
LGMN-215ENST00000557315 PAXIP1Q6ZW49 1069 aaPredicted RBP17.55■□□□□ 0.4
LGMN-215ENST00000557315 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
LGMN-215ENST00000557315 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
LGMN-215ENST00000557315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
LGMN-215ENST00000557315 CLMNQ96JQ2 1002 aa17.55■□□□□ 0.4
LGMN-215ENST00000557315 USP40Q9NVE5 1235 aa17.55■□□□□ 0.4
LGMN-215ENST00000557315 RAI14Q9P0K7 980 aa17.55■□□□□ 0.4
LGMN-215ENST00000557315 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
LGMN-215ENST00000557315 SALL3Q9BXA9 1300 aa17.54■□□□□ 0.4
LGMN-215ENST00000557315 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
LGMN-215ENST00000557315 BEGAINQ9BUH8 593 aa17.54■□□□□ 0.4
LGMN-215ENST00000557315 IDI2Q9BXS1 227 aa17.54■□□□□ 0.4
LGMN-215ENST00000557315 ANGEL1Q9UNK9 670 aaKnown RBP17.54■□□□□ 0.4
LGMN-215ENST00000557315 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
LGMN-215ENST00000557315 RGS3P49796 1198 aa17.53■□□□□ 0.4
LGMN-215ENST00000557315 TCP10Q12799 353 aa17.53■□□□□ 0.4
LGMN-215ENST00000557315 HDAC1Q13547 482 aaPredicted RBP17.53■□□□□ 0.4
LGMN-215ENST00000557315 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
LGMN-215ENST00000557315 LRP2BPQ9P2M1 347 aa17.53■□□□□ 0.4
LGMN-215ENST00000557315 CHGBP05060 677 aa17.52■□□□□ 0.4
LGMN-215ENST00000557315 ATP5JP18859 108 aa17.52■□□□□ 0.4
LGMN-215ENST00000557315 GJA5P36382 358 aa17.52■□□□□ 0.4
LGMN-215ENST00000557315 MAP2K2P36507 400 aa17.52■□□□□ 0.4
LGMN-215ENST00000557315 ZNF157P51786 506 aaPredicted RBP17.52■□□□□ 0.4
LGMN-215ENST00000557315 IRX6P78412 446 aaPredicted RBP17.52■□□□□ 0.4
LGMN-215ENST00000557315 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
LGMN-215ENST00000557315 FAM151AQ8WW52 585 aa17.52■□□□□ 0.4
LGMN-215ENST00000557315 IGHDP01880 384 aa17.51■□□□□ 0.39
LGMN-215ENST00000557315 NF2P35240 595 aa17.51■□□□□ 0.39
LGMN-215ENST00000557315 TNNI2P48788 182 aa17.51■□□□□ 0.39
LGMN-215ENST00000557315 TTLL12Q14166 644 aaPredicted RBP17.51■□□□□ 0.39
LGMN-215ENST00000557315 SUPT20HL1Q3ZLR7 823 aa17.51■□□□□ 0.39
LGMN-215ENST00000557315 SLFNL1Q499Z3 407 aa17.51■□□□□ 0.39
LGMN-215ENST00000557315 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
LGMN-215ENST00000557315 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
LGMN-215ENST00000557315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.51■□□□□ 0.39
LGMN-215ENST00000557315 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
LGMN-215ENST00000557315 BOLA2Q9H3K6 86 aa17.51■□□□□ 0.39
LGMN-215ENST00000557315 TMOD2Q9NZR1 351 aa17.51■□□□□ 0.39
LGMN-215ENST00000557315 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
LGMN-215ENST00000557315 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
LGMN-215ENST00000557315 PPP4CP60510 307 aa17.5■□□□□ 0.39
LGMN-215ENST00000557315 DYNLL1P63167 89 aaKnown RBP17.5■□□□□ 0.39
LGMN-215ENST00000557315 NOGQ13253 232 aa17.5■□□□□ 0.39
LGMN-215ENST00000557315 ARMC9Q7Z3E5 817 aa17.5■□□□□ 0.39
LGMN-215ENST00000557315 HAUS7Q99871 368 aa17.5■□□□□ 0.39
LGMN-215ENST00000557315 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
LGMN-215ENST00000557315 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
LGMN-215ENST00000557315 MYH1P12882 1939 aa17.49■□□□□ 0.39
LGMN-215ENST00000557315 GOLIM4O00461 696 aa17.49■□□□□ 0.39
LGMN-215ENST00000557315 ENTPD3O75355 529 aa17.49■□□□□ 0.39
LGMN-215ENST00000557315 IDH1O75874 414 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms