RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
SNX6-209ENST00000557265 KLHDC4Q8TBB5 520 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 ZNF341Q9BYN7 854 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 SUGT1Q9Y2Z0 365 aa15.47■□□□□ 0.07
SNX6-209ENST00000557265 MAST3O60307 1309 aa15.46■□□□□ 0.07
SNX6-209ENST00000557265 PDHXO00330 501 aa15.46■□□□□ 0.07
SNX6-209ENST00000557265 HHIPL2Q6UWX4 724 aa15.46■□□□□ 0.07
SNX6-209ENST00000557265 ANKRD23Q86SG2 305 aa15.46■□□□□ 0.07
SNX6-209ENST00000557265 TRIM47Q96LD4 638 aa15.46■□□□□ 0.07
SNX6-209ENST00000557265 SRRDQ9UH36 339 aa15.46■□□□□ 0.07
SNX6-209ENST00000557265 TRIOBPQ9H2D6 2365 aa15.46■□□□□ 0.06
SNX6-209ENST00000557265 FMNL1O95466 1100 aaPredicted RBP15.45■□□□□ 0.06
SNX6-209ENST00000557265 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
SNX6-209ENST00000557265 OSBPP22059 807 aa15.45■□□□□ 0.06
SNX6-209ENST00000557265 HOXD10P28358 340 aa15.45■□□□□ 0.06
SNX6-209ENST00000557265 PUM3Q15397 648 aaKnown RBP15.45■□□□□ 0.06
SNX6-209ENST00000557265 CHRDL2Q6WN34 429 aa15.45■□□□□ 0.06
SNX6-209ENST00000557265 FAM151AQ8WW52 585 aa15.45■□□□□ 0.06
SNX6-209ENST00000557265 DPF3Q92784 378 aa15.45■□□□□ 0.06
SNX6-209ENST00000557265 SHISA4Q96DD7 197 aa15.45■□□□□ 0.06
SNX6-209ENST00000557265 FGFR2P21802 821 aa15.44■□□□□ 0.06
SNX6-209ENST00000557265 GRK4P32298 578 aa15.44■□□□□ 0.06
SNX6-209ENST00000557265 TCP10Q12799 353 aa15.44■□□□□ 0.06
SNX6-209ENST00000557265 RAET1EQ8TD07 263 aa15.44■□□□□ 0.06
SNX6-209ENST00000557265 ZNF112Q9UJU3 913 aa15.44■□□□□ 0.06
SNX6-209ENST00000557265 KCNH4Q9UQ05 1017 aa15.44■□□□□ 0.06
SNX6-209ENST00000557265 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
SNX6-209ENST00000557265 KIF16BQ96L93 1317 aa15.43■□□□□ 0.06
SNX6-209ENST00000557265 MOGSQ13724 837 aa15.43■□□□□ 0.06
SNX6-209ENST00000557265 NKX2-3Q8TAU0 364 aa15.43■□□□□ 0.06
SNX6-209ENST00000557265 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
SNX6-209ENST00000557265 ADGRA2Q96PE1 1338 aa15.43■□□□□ 0.06
SNX6-209ENST00000557265 CACNA1FO60840 1977 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 CCL5P13501 91 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
SNX6-209ENST00000557265 NFIAQ12857 509 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 RBM27Q9P2N5 1060 aaKnown RBP15.42■□□□□ 0.06
SNX6-209ENST00000557265 BIN2Q9UBW5 565 aaPredicted RBP15.42■□□□□ 0.06
SNX6-209ENST00000557265 DAGLAQ9Y4D2 1042 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 ARAP2Q8WZ64 1704 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 MYPNQ86TC9 1320 aa15.42■□□□□ 0.06
SNX6-209ENST00000557265 GJB1P08034 283 aa15.41■□□□□ 0.06
SNX6-209ENST00000557265 SLC5A1P13866 664 aa15.41■□□□□ 0.06
SNX6-209ENST00000557265 GJA8P48165 433 aa15.41■□□□□ 0.06
SNX6-209ENST00000557265 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
SNX6-209ENST00000557265 LPIN2Q92539 896 aa15.41■□□□□ 0.06
SNX6-209ENST00000557265 PARK7Q99497 189 aaKnown RBP15.41■□□□□ 0.06
SNX6-209ENST00000557265 USP44Q9H0E7 712 aa15.41■□□□□ 0.06
SNX6-209ENST00000557265 RNF208Q9H0X6 261 aa15.41■□□□□ 0.06
SNX6-209ENST00000557265 EYA2O00167 538 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 CXCL11O14625 94 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 CYP2C8P10632 490 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 FCGRTP55899 365 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 PRKCZQ05513 592 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 NOL9Q5SY16 702 aaKnown RBP15.4■□□□□ 0.06
SNX6-209ENST00000557265 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 ZFPM1Q8IX07 1006 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 FAM198AQ9UFP1 575 aa15.4■□□□□ 0.06
SNX6-209ENST00000557265 ZSWIM8A7E2V4 1837 aa15.39■□□□□ 0.05
SNX6-209ENST00000557265 ANP32CO43423 234 aa15.39■□□□□ 0.05
SNX6-209ENST00000557265 PRDX5P30044 214 aa15.39■□□□□ 0.05
SNX6-209ENST00000557265 UBXN2AP68543 259 aa15.39■□□□□ 0.05
SNX6-209ENST00000557265 HTATIP2Q9BUP3 242 aa15.39■□□□□ 0.05
SNX6-209ENST00000557265 LDHBP07195 334 aaKnown RBP15.38■□□□□ 0.05
SNX6-209ENST00000557265 BCRP11274 1271 aa15.38■□□□□ 0.05
SNX6-209ENST00000557265 RFX5P48382 616 aaPredicted RBP15.38■□□□□ 0.05
SNX6-209ENST00000557265 ATG9AQ7Z3C6 839 aa15.38■□□□□ 0.05
SNX6-209ENST00000557265 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
SNX6-209ENST00000557265 GABRQQ9UN88 632 aa15.38■□□□□ 0.05
SNX6-209ENST00000557265 ZHX2Q9Y6X8 837 aa15.38■□□□□ 0.05
SNX6-209ENST00000557265 SLAIN1Q8ND83 568 aa15.37■□□□□ 0.05
SNX6-209ENST00000557265 U2AF1L4Q8WU68 220 aaKnown RBP15.37■□□□□ 0.05
SNX6-209ENST00000557265 UNC93B1Q9H1C4 597 aa15.37■□□□□ 0.05
SNX6-209ENST00000557265 PICK1Q9NRD5 415 aa15.37■□□□□ 0.05
SNX6-209ENST00000557265 GNL3LQ9NVN8 582 aaKnown RBP15.37■□□□□ 0.05
SNX6-209ENST00000557265 NR2E3Q9Y5X4 410 aa15.37■□□□□ 0.05
SNX6-209ENST00000557265 PTPRCP08575 1304 aa15.37■□□□□ 0.05
SNX6-209ENST00000557265 PHF20L1A8MW92 1017 aa15.36■□□□□ 0.05
SNX6-209ENST00000557265 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
SNX6-209ENST00000557265 FASTKD5Q7L8L6 764 aaKnown RBP15.36■□□□□ 0.05
SNX6-209ENST00000557265 SCYL3Q8IZE3 742 aa15.36■□□□□ 0.05
SNX6-209ENST00000557265 SZT2Q5T011 3432 aa15.36■□□□□ 0.05
SNX6-209ENST00000557265 RANBP2P49792 3224 aaKnown RBP15.36■□□□□ 0.05
SNX6-209ENST00000557265 A0A0G2JLL6 359 aaPredicted RBP15.35■□□□□ 0.05
SNX6-209ENST00000557265 ADCY3O60266 1144 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 SGPL1O95470 568 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 PTPRAP18433 802 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 FLT3LGP49771 235 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 GADL1Q6ZQY3 521 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 PRRT2Q7Z6L0 340 aaPredicted RBP15.35■□□□□ 0.05
SNX6-209ENST00000557265 SSH1Q8WYL5 1049 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 SIL1Q9H173 461 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 PRO3102Q9H379 93 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 CEP126Q9P2H0 1117 aa15.35■□□□□ 0.05
SNX6-209ENST00000557265 AFG3L2Q9Y4W6 797 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms