RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 OTUD5Q96G74 571 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 WRNIP1Q96S55 665 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 SALL1Q9NSC2 1324 aa19.74■□□□□ 0.75
TUBB3-213ENST00000557262 CCDC102BQ68D86 513 aa19.73■□□□□ 0.75
TUBB3-213ENST00000557262 CDC42EP5Q6NZY7 148 aa19.73■□□□□ 0.75
TUBB3-213ENST00000557262 ZKSCAN4Q969J2 545 aaPredicted RBP19.73■□□□□ 0.75
TUBB3-213ENST00000557262 ZFYVE28Q9HCC9 887 aa19.73■□□□□ 0.75
TUBB3-213ENST00000557262 SNCAIPQ9Y6H5 919 aa19.73■□□□□ 0.75
TUBB3-213ENST00000557262 TIMM10P62072 90 aa19.72■□□□□ 0.75
TUBB3-213ENST00000557262 TAF1CQ15572 869 aaPredicted RBP19.72■□□□□ 0.75
TUBB3-213ENST00000557262 MIGA2Q7L4E1 593 aa19.72■□□□□ 0.75
TUBB3-213ENST00000557262 CD99L2Q8TCZ2 262 aa19.72■□□□□ 0.75
TUBB3-213ENST00000557262 ZNF341Q9BYN7 854 aa19.72■□□□□ 0.75
TUBB3-213ENST00000557262 RPAP1Q9BWH6 1393 aaPredicted RBP19.71■□□□□ 0.75
TUBB3-213ENST00000557262 SRGAP3O43295 1099 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 CETPP11597 493 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 ADORA1P30542 326 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 TCP10Q12799 353 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 MTX1Q13505 466 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 FAM43AQ8N2R8 423 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 ZGPATQ8N5A5 531 aaKnown RBP19.71■□□□□ 0.75
TUBB3-213ENST00000557262 EFCC1Q9HA90 598 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 USP40Q9NVE5 1235 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 AKAP2Q9Y2D5 859 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 PTPN22Q9Y2R2 807 aa19.71■□□□□ 0.75
TUBB3-213ENST00000557262 WDHD1O75717 1129 aaPredicted RBP19.7■□□□□ 0.74
TUBB3-213ENST00000557262 SNAPC2Q13487 334 aa19.7■□□□□ 0.74
TUBB3-213ENST00000557262 PDE4DIPQ5VU43 2346 aa19.7■□□□□ 0.74
TUBB3-213ENST00000557262 HTTP42858 3142 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 IRF6O14896 467 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 BCAR3O75815 825 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 TRIM27P14373 513 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 PPATQ06203 517 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 TFCP2Q12800 502 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 NFIAQ12857 509 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 PPIL2Q13356 520 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 ARHGEF6Q15052 776 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 ATF7IPQ6VMQ6 1270 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 FRAT1Q92837 279 aaPredicted RBP19.69■□□□□ 0.74
TUBB3-213ENST00000557262 ZNF112Q9UJU3 913 aa19.69■□□□□ 0.74
TUBB3-213ENST00000557262 MYH13Q9UKX3 1938 aa19.68■□□□□ 0.74
TUBB3-213ENST00000557262 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
TUBB3-213ENST00000557262 INPP5BP32019 993 aa19.68■□□□□ 0.74
TUBB3-213ENST00000557262 XAGE2Q96GT9 111 aa19.68■□□□□ 0.74
TUBB3-213ENST00000557262 ZCCHC17Q9NP64 241 aaKnown RBP19.68■□□□□ 0.74
TUBB3-213ENST00000557262 FAM198AQ9UFP1 575 aa19.68■□□□□ 0.74
TUBB3-213ENST00000557262 GNAI2P04899 355 aa19.67■□□□□ 0.74
TUBB3-213ENST00000557262 RASGRF1Q13972 1273 aa19.67■□□□□ 0.74
TUBB3-213ENST00000557262 MVPQ14764 893 aaKnown RBP19.67■□□□□ 0.74
TUBB3-213ENST00000557262 SPTY2D1Q68D10 685 aaPredicted RBP19.67■□□□□ 0.74
TUBB3-213ENST00000557262 SLF2Q8IX21 1173 aa19.67■□□□□ 0.74
TUBB3-213ENST00000557262 ABCF2Q9UG63 623 aa19.67■□□□□ 0.74
TUBB3-213ENST00000557262 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
TUBB3-213ENST00000557262 BTBD19C9JJ37 291 aa19.66■□□□□ 0.74
TUBB3-213ENST00000557262 TLR2O60603 784 aa19.66■□□□□ 0.74
TUBB3-213ENST00000557262 CAP1Q01518 475 aa19.66■□□□□ 0.74
TUBB3-213ENST00000557262 FAM163AQ96GL9 167 aaPredicted RBP19.66■□□□□ 0.74
TUBB3-213ENST00000557262 NEUROD6Q96NK8 337 aa19.66■□□□□ 0.74
TUBB3-213ENST00000557262 IDI2Q9BXS1 227 aa19.66■□□□□ 0.74
TUBB3-213ENST00000557262 TNNQ9UQP3 1299 aa19.66■□□□□ 0.74
TUBB3-213ENST00000557262 ENTPD3O75355 529 aa19.65■□□□□ 0.74
TUBB3-213ENST00000557262 DZIP1Q86YF9 867 aaKnown RBP19.65■□□□□ 0.74
TUBB3-213ENST00000557262 ZFPM1Q8IX07 1006 aa19.65■□□□□ 0.74
TUBB3-213ENST00000557262 CLUAP1Q96AJ1 413 aa19.65■□□□□ 0.74
TUBB3-213ENST00000557262 GAKO14976 1311 aa19.65■□□□□ 0.74
TUBB3-213ENST00000557262 CENPFP49454 3210 aa19.64■□□□□ 0.74
TUBB3-213ENST00000557262 G3BP1Q13283 466 aaKnown RBP eCLIP19.64■□□□□ 0.73
TUBB3-213ENST00000557262 NOL9Q5SY16 702 aaKnown RBP19.64■□□□□ 0.73
TUBB3-213ENST00000557262 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
TUBB3-213ENST00000557262 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.64■□□□□ 0.73
TUBB3-213ENST00000557262 PNMA6EA0A0J9YXQ4 647 aa19.63■□□□□ 0.73
TUBB3-213ENST00000557262 SLC34A2O95436 690 aa19.63■□□□□ 0.73
TUBB3-213ENST00000557262 RGS3P49796 1198 aa19.63■□□□□ 0.73
TUBB3-213ENST00000557262 GORABQ5T7V8 394 aa19.63■□□□□ 0.73
TUBB3-213ENST00000557262 ERICH6Q7L0X2 663 aa19.63■□□□□ 0.73
TUBB3-213ENST00000557262 ARMC5Q96C12 935 aa19.63■□□□□ 0.73
TUBB3-213ENST00000557262 KCNH4Q9UQ05 1017 aa19.63■□□□□ 0.73
TUBB3-213ENST00000557262 KIF22Q14807 665 aa19.62■□□□□ 0.73
TUBB3-213ENST00000557262 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
TUBB3-213ENST00000557262 ANKRD23Q86SG2 305 aa19.62■□□□□ 0.73
TUBB3-213ENST00000557262 AK9Q5TCS8 1911 aa19.62■□□□□ 0.73
TUBB3-213ENST00000557262 POTEFA5A3E0 1075 aa19.61■□□□□ 0.73
TUBB3-213ENST00000557262 MAP3K10Q02779 954 aa19.61■□□□□ 0.73
TUBB3-213ENST00000557262 MECOMQ03112 1051 aa19.61■□□□□ 0.73
TUBB3-213ENST00000557262 ZSCAN29Q8IWY8 852 aaPredicted RBP19.61■□□□□ 0.73
TUBB3-213ENST00000557262 TMEM57Q8N5G2 664 aa19.61■□□□□ 0.73
TUBB3-213ENST00000557262 HMG20BQ9P0W2 317 aa19.61■□□□□ 0.73
TUBB3-213ENST00000557262 GPR75-ASB3A0A0A6YYF3 556 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 PHF20L1A8MW92 1017 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 PDHXO00330 501 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 CXCL11O14625 94 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 LDHCP07864 332 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 BTDP43251 543 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 LACTBP83111 547 aaPredicted RBP19.6■□□□□ 0.73
TUBB3-213ENST00000557262 PRPF38BQ5VTL8 546 aaKnown RBP19.6■□□□□ 0.73
TUBB3-213ENST00000557262 SH3BP5LQ7L8J4 393 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 NBPF11Q86T75 865 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 SPATA5Q8NB90 893 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 MYH2Q9UKX2 1941 aa19.6■□□□□ 0.73
TUBB3-213ENST00000557262 MROH7-TTC4A0A0A0MT08 1334 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms