RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 U2AF1L4Q8WU68 220 aaKnown RBP12.19□□□□□ -0.46
RIPK3-205ENST00000557253 ZNF341Q9BYN7 854 aa12.19□□□□□ -0.46
RIPK3-205ENST00000557253 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
RIPK3-205ENST00000557253 PRKRIP1Q9H875 184 aaPredicted RBP12.19□□□□□ -0.46
RIPK3-205ENST00000557253 TMOD2Q9NZR1 351 aa12.19□□□□□ -0.46
RIPK3-205ENST00000557253 GABRQQ9UN88 632 aa12.19□□□□□ -0.46
RIPK3-205ENST00000557253 COL6A3P12111 3177 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 GRM8O00222 908 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 CYP2C8P10632 490 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 DCAF15Q66K64 600 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 APOBEC3HQ6NTF7 200 aaKnown RBP12.18□□□□□ -0.46
RIPK3-205ENST00000557253 FBXO33Q7Z6M2 555 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 FAM83AQ86UY5 434 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 WWC1Q8IX03 1113 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 C9orf78Q9NZ63 289 aaPredicted RBP12.18□□□□□ -0.46
RIPK3-205ENST00000557253 STAP2Q9UGK3 403 aa12.18□□□□□ -0.46
RIPK3-205ENST00000557253 EVI5O60447 810 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 VAMP4O75379 141 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 SGPL1O95470 568 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 HDLBPQ00341 1268 aaKnown RBP12.17□□□□□ -0.46
RIPK3-205ENST00000557253 MOGSQ13724 837 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 HOOK2Q96ED9 719 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 ZDHHC15Q96MV8 337 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 CEP290O15078 2479 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 MGAMO43451 1857 aa12.17□□□□□ -0.46
RIPK3-205ENST00000557253 FANCIQ9NVI1 1328 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 ADCY3O60266 1144 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 TFRCP02786 760 aaKnown RBP12.16□□□□□ -0.46
RIPK3-205ENST00000557253 ELNP15502 786 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 BCAMP50895 628 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 FCGRTP55899 365 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 TCP10Q12799 353 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 MIER1Q8N108 512 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 TBC1D22AQ8WUA7 517 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 SUCLG2Q96I99 432 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 KCNH4Q9UQ05 1017 aa12.16□□□□□ -0.46
RIPK3-205ENST00000557253 MROH5Q6ZUA9 1318 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 BCRP11274 1271 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 EXOSC9Q06265 439 aaKnown RBP12.15□□□□□ -0.46
RIPK3-205ENST00000557253 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 CAVIN4Q5BKX8 364 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 METTL24Q5JXM2 366 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 DEFB118Q96PH6 123 aa12.15□□□□□ -0.46
RIPK3-205ENST00000557253 PARK7Q99497 189 aaKnown RBP12.15□□□□□ -0.46
RIPK3-205ENST00000557253 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
RIPK3-205ENST00000557253 A0A1W2PPC1 479 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 INHAP05111 366 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 FLT3LGP49771 235 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 CCDC184Q52MB2 194 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 FKBP1CQ5VVH2 108 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 FAM151AQ8WW52 585 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 KAZALD1Q96I82 304 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 PAWRQ96IZ0 340 aaKnown RBP12.14□□□□□ -0.47
RIPK3-205ENST00000557253 ZNF112Q9UJU3 913 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
RIPK3-205ENST00000557253 RPAP1Q9BWH6 1393 aaPredicted RBP12.14□□□□□ -0.47
RIPK3-205ENST00000557253 NBPF7P0C2Y1 421 aaPredicted RBP12.13□□□□□ -0.47
RIPK3-205ENST00000557253 NFIAQ12857 509 aa12.13□□□□□ -0.47
RIPK3-205ENST00000557253 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
RIPK3-205ENST00000557253 Q7L0L9 218 aa12.13□□□□□ -0.47
RIPK3-205ENST00000557253 KLHDC4Q8TBB5 520 aa12.13□□□□□ -0.47
RIPK3-205ENST00000557253 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
RIPK3-205ENST00000557253 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
RIPK3-205ENST00000557253 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
RIPK3-205ENST00000557253 MAST3O60307 1309 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 IL16Q14005 1332 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 CACNA1FO60840 1977 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 ALPK3Q96L96 1907 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
RIPK3-205ENST00000557253 PDE8BO95263 885 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 CDC42EP5Q6NZY7 148 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 GADL1Q6ZQY3 521 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 ZFPM1Q8IX07 1006 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 DIS3LQ8TF46 1054 aaKnown RBP12.12□□□□□ -0.47
RIPK3-205ENST00000557253 SRCIN1Q9C0H9 1055 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 BICC1Q9H694 974 aaKnown RBP12.12□□□□□ -0.47
RIPK3-205ENST00000557253 ZMYND8Q9ULU4 1186 aaPredicted RBP12.12□□□□□ -0.47
RIPK3-205ENST00000557253 ZHX2Q9Y6X8 837 aa12.12□□□□□ -0.47
RIPK3-205ENST00000557253 LAMA3Q16787 3333 aa12.11□□□□□ -0.47
RIPK3-205ENST00000557253 ALDH1L1O75891 902 aa12.11□□□□□ -0.47
RIPK3-205ENST00000557253 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
RIPK3-205ENST00000557253 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
RIPK3-205ENST00000557253 C7orf61Q8IZ16 206 aa12.11□□□□□ -0.47
RIPK3-205ENST00000557253 DEFB123Q8N688 67 aa12.11□□□□□ -0.47
RIPK3-205ENST00000557253 VGLL2Q8N8G2 317 aa12.11□□□□□ -0.47
RIPK3-205ENST00000557253 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
RIPK3-205ENST00000557253 DAGLAQ9Y4D2 1042 aa12.11□□□□□ -0.47
RIPK3-205ENST00000557253 A0A0G2JLL6 359 aaPredicted RBP12.1□□□□□ -0.47
RIPK3-205ENST00000557253 CXCL11O14625 94 aa12.1□□□□□ -0.47
RIPK3-205ENST00000557253 SLURP2P0DP57 97 aa12.1□□□□□ -0.47
RIPK3-205ENST00000557253 SYN1P17600 705 aa12.1□□□□□ -0.47
RIPK3-205ENST00000557253 PRRT2Q7Z6L0 340 aaPredicted RBP12.1□□□□□ -0.47
RIPK3-205ENST00000557253 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
RIPK3-205ENST00000557253 PAK6Q9NQU5 681 aaPredicted RBP12.1□□□□□ -0.47
RIPK3-205ENST00000557253 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms