RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CTNNA3Q9UI47 895 aa28.33■■■□□ 2.13
SIX4-203ENST00000556952 FOXP2O15409 715 aa28.33■■■□□ 2.12
SIX4-203ENST00000556952 LDHCP07864 332 aa28.33■■■□□ 2.12
SIX4-203ENST00000556952 VEGFAP15692 232 aaPredicted RBP28.33■■■□□ 2.12
SIX4-203ENST00000556952 SLF2Q8IX21 1173 aa28.33■■■□□ 2.12
SIX4-203ENST00000556952 MIGA1Q8NAN2 632 aa28.33■■■□□ 2.12
SIX4-203ENST00000556952 FBXW7Q969H0 707 aa28.33■■■□□ 2.12
SIX4-203ENST00000556952 RIOK1Q9BRS2 568 aaKnown RBP28.33■■■□□ 2.12
SIX4-203ENST00000556952 ARMT1Q9H993 441 aa28.33■■■□□ 2.12
SIX4-203ENST00000556952 ZMYM6O95789 1325 aa28.32■■■□□ 2.12
SIX4-203ENST00000556952 VIL1P09327 827 aaKnown RBP28.32■■■□□ 2.12
SIX4-203ENST00000556952 LCORLQ8N3X6 602 aa28.32■■■□□ 2.12
SIX4-203ENST00000556952 USP17L3A6NCW0 530 aa28.31■■■□□ 2.12
SIX4-203ENST00000556952 USP17L4A6NCW7 530 aa28.31■■■□□ 2.12
SIX4-203ENST00000556952 GRIK5Q16478 980 aa28.31■■■□□ 2.12
SIX4-203ENST00000556952 USP17L1Q7RTZ2 530 aa28.31■■■□□ 2.12
SIX4-203ENST00000556952 IPO9Q96P70 1041 aaKnown RBP28.31■■■□□ 2.12
SIX4-203ENST00000556952 MXD3Q9BW11 206 aa28.31■■■□□ 2.12
SIX4-203ENST00000556952 SHTN1A0MZ66 631 aa28.3■■■□□ 2.12
SIX4-203ENST00000556952 TSGA10IPQ3SY00 556 aa28.3■■■□□ 2.12
SIX4-203ENST00000556952 CERS3Q8IU89 383 aa28.3■■■□□ 2.12
SIX4-203ENST00000556952 RASEFQ8IZ41 740 aa28.3■■■□□ 2.12
SIX4-203ENST00000556952 MROH7-TTC4A0A0A0MT08 1334 aa28.3■■■□□ 2.12
SIX4-203ENST00000556952 PATL2C9JE40 543 aaKnown RBP28.29■■■□□ 2.12
SIX4-203ENST00000556952 EPS15P42566 896 aa28.29■■■□□ 2.12
SIX4-203ENST00000556952 DACT2Q5SW24 774 aa28.29■■■□□ 2.12
SIX4-203ENST00000556952 HACL1Q9UJ83 578 aa28.29■■■□□ 2.12
SIX4-203ENST00000556952 BECN1Q14457 450 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 ALX1Q15699 326 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 RSBN1LQ6PCB5 846 aaPredicted RBP28.28■■■□□ 2.12
SIX4-203ENST00000556952 CERS5Q8N5B7 392 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 FAM163AQ96GL9 167 aaPredicted RBP28.28■■■□□ 2.12
SIX4-203ENST00000556952 TAF1DQ9H5J8 278 aaPredicted RBP28.28■■■□□ 2.12
SIX4-203ENST00000556952 GPRC5DQ9NZD1 345 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 IQCA1LA6NCM1 817 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 KRT32Q14532 448 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 NOL10Q9BSC4 688 aaKnown RBP28.28■■■□□ 2.12
SIX4-203ENST00000556952 TM6SF1Q9BZW5 370 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 SLC4A4Q9Y6R1 1079 aa28.28■■■□□ 2.12
SIX4-203ENST00000556952 ADAMTSL1Q8N6G6 1762 aa28.27■■■□□ 2.12
SIX4-203ENST00000556952 BAG3O95817 575 aa28.27■■■□□ 2.12
SIX4-203ENST00000556952 FGAP02671 866 aa28.27■■■□□ 2.12
SIX4-203ENST00000556952 APPP05067 770 aa28.27■■■□□ 2.12
SIX4-203ENST00000556952 CYP21A2P08686 494 aa28.27■■■□□ 2.12
SIX4-203ENST00000556952 LMOD1P29536 600 aaPredicted RBP28.27■■■□□ 2.12
SIX4-203ENST00000556952 SNX21Q969T3 373 aa28.27■■■□□ 2.12
SIX4-203ENST00000556952 NACAP1Q9BZK3 213 aa28.27■■■□□ 2.12
SIX4-203ENST00000556952 AATFQ9NY61 560 aaKnown RBP eCLIP28.27■■■□□ 2.12
SIX4-203ENST00000556952 GAKO14976 1311 aa28.26■■■□□ 2.11
SIX4-203ENST00000556952 EPHX2P34913 555 aa28.26■■■□□ 2.11
SIX4-203ENST00000556952 DIXDC1Q155Q3 683 aa28.26■■■□□ 2.11
SIX4-203ENST00000556952 IMMTQ16891 758 aaKnown RBP28.26■■■□□ 2.11
SIX4-203ENST00000556952 GSG1L2A8MUP6 293 aa28.25■■■□□ 2.11
SIX4-203ENST00000556952 ST18O60284 1047 aa28.25■■■□□ 2.11
SIX4-203ENST00000556952 POTEIP0CG38 1075 aa28.25■■■□□ 2.11
SIX4-203ENST00000556952 POTEJP0CG39 1038 aa28.25■■■□□ 2.11
SIX4-203ENST00000556952 PPP4CP60510 307 aa28.25■■■□□ 2.11
SIX4-203ENST00000556952 DYNLL1P63167 89 aaKnown RBP28.25■■■□□ 2.11
SIX4-203ENST00000556952 GMLQ99445 158 aa28.25■■■□□ 2.11
SIX4-203ENST00000556952 CRNKL1Q9BZJ0 848 aaKnown RBP28.25■■■□□ 2.11
SIX4-203ENST00000556952 CDK5RAP2Q96SN8 1893 aa28.25■■■□□ 2.11
SIX4-203ENST00000556952 RPS12P25398 132 aaKnown RBP28.24■■■□□ 2.11
SIX4-203ENST00000556952 PSMA5P28066 241 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 IFNL3Q8IZI9 196 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 DPF2Q92785 391 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 CNOT7Q9UIV1 285 aaKnown RBP28.24■■■□□ 2.11
SIX4-203ENST00000556952 TTF2Q9UNY4 1162 aaKnown RBP28.24■■■□□ 2.11
SIX4-203ENST00000556952 FOCADQ5VW36 1801 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 MYO3BQ8WXR4 1341 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 LAMB1P07942 1786 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 GIMAP6Q6P9H5 292 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 MICALL2Q8IY33 904 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 NAPBQ9H115 298 aa28.24■■■□□ 2.11
SIX4-203ENST00000556952 EPB41L4AQ9HCS5 686 aaPredicted RBP28.24■■■□□ 2.11
SIX4-203ENST00000556952 GPR75-ASB3A0A0A6YYF3 556 aa28.23■■■□□ 2.11
SIX4-203ENST00000556952 AGBL3Q8NEM8 1001 aa28.23■■■□□ 2.11
SIX4-203ENST00000556952 JAKMIP1Q96N16 626 aaKnown RBP28.23■■■□□ 2.11
SIX4-203ENST00000556952 NAV1Q8NEY1 1877 aa28.22■■■□□ 2.11
SIX4-203ENST00000556952 PRKAB2O43741 272 aa28.22■■■□□ 2.11
SIX4-203ENST00000556952 PLCG2P16885 1265 aa28.22■■■□□ 2.11
SIX4-203ENST00000556952 HSCBQ8IWL3 235 aa28.22■■■□□ 2.11
SIX4-203ENST00000556952 BAZ2AQ9UIF9 1905 aaKnown RBP28.21■■■□□ 2.11
SIX4-203ENST00000556952 ZNF213O14771 459 aa28.21■■■□□ 2.11
SIX4-203ENST00000556952 TDO2P48775 406 aa28.21■■■□□ 2.11
SIX4-203ENST00000556952 NEK4P51957 841 aa28.21■■■□□ 2.11
SIX4-203ENST00000556952 ADCK5Q3MIX3 580 aa28.21■■■□□ 2.11
SIX4-203ENST00000556952 MRIQ9BWK5 157 aa28.21■■■□□ 2.11
SIX4-203ENST00000556952 ATP8A2Q9NTI2 1148 aa28.21■■■□□ 2.11
SIX4-203ENST00000556952 CASTP20810 708 aaKnown RBP28.2■■■□□ 2.11
SIX4-203ENST00000556952 BTDP43251 543 aa28.2■■■□□ 2.11
SIX4-203ENST00000556952 HDLBPQ00341 1268 aaKnown RBP28.2■■■□□ 2.11
SIX4-203ENST00000556952 EAPPQ56P03 285 aaPredicted RBP28.2■■■□□ 2.11
SIX4-203ENST00000556952 HHIPL2Q6UWX4 724 aa28.2■■■□□ 2.11
SIX4-203ENST00000556952 TRPM4Q8TD43 1214 aa28.2■■■□□ 2.11
SIX4-203ENST00000556952 TBC1D2Q9BYX2 928 aa28.2■■■□□ 2.11
SIX4-203ENST00000556952 ZSWIM6Q9HCJ5 1215 aa28.2■■■□□ 2.11
SIX4-203ENST00000556952 ADARB2Q9NS39 739 aaKnown RBP28.2■■■□□ 2.11
SIX4-203ENST00000556952 ECM29Q5VYK3 1845 aa28.2■■■□□ 2.1
SIX4-203ENST00000556952 F8W031 263 aaPredicted RBP28.2■■■□□ 2.1
SIX4-203ENST00000556952 TOMM70O94826 608 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms